RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 TCTE3Q8IZS6 198 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 ABHD12Q8N2K0 398 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 ZDHHC22Q8N966 263 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 MAPK1IP1LQ8NDC0 245 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 BEND2Q8NDZ0 799 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 OR10V1Q8NGI7 309 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 OR13D1Q8NGV5 346 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 OR9G1Q8NH87 305 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 CT45A3Q8NHU0 189 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 UPRTQ96BW1 309 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 C2orf88Q9BSF0 95 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 PDCD10Q9BUL8 212 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 RSRP1Q9BUV0 290 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 SUCNR1Q9BXA5 334 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 CLEC7AQ9BXN2 247 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 KRTAP3-3Q9BYR6 98 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 KRTAP3-2Q9BYR7 98 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 PARP12Q9H0J9 701 aaKnown RBP5.87□□□□□ -1.47
NUP54-204ENST00000506098 FXYD6Q9H0Q3 95 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 DPAGT1Q9H3H5 408 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 RANBP3Q9H6Z4 567 aaPredicted RBP5.87□□□□□ -1.47
NUP54-204ENST00000506098 HEXA-AS1Q9H8Q6 139 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 LPAR2Q9HBW0 351 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 MCUBQ9NWR8 336 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 GNG12Q9UBI6 72 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 SETXQ7Z333 2677 aaKnown RBP5.87□□□□□ -1.47
NUP54-204ENST00000506098 OTOGQ6ZRI0 2925 aa5.87□□□□□ -1.47
NUP54-204ENST00000506098 A0A0B4J293 547 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 MFSD2BA6NFX1 497 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 MARCH11A6NNE9 402 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 CD5LO43866 347 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 IGLV2-14P01704 120 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 MBP02144 154 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 GNRHRP30968 328 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 MECP2P51608 486 aaKnown RBP5.86□□□□□ -1.47
NUP54-204ENST00000506098 UBE2E1P51965 193 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 PRRX1P54821 245 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 RAG2P55895 527 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 RAB25P57735 213 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 HERV-K104P61576 105 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 DEFA6Q01524 100 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 KRTAP1-1Q07627 177 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 EIF4EBP1Q13541 118 aaPredicted RBP5.86□□□□□ -1.47
NUP54-204ENST00000506098 HLA-DRB5Q30154 266 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 CLLU1Q5K131 121 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 ZNF626Q68DY1 528 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 SLC25A24Q6NUK1 477 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 FAM71F2Q6NXP2 309 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 NRARPQ7Z6K4 114 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 ZNF645Q8N7E2 425 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.86□□□□□ -1.47
NUP54-204ENST00000506098 ZBTB34Q8NCN2 500 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 BVESQ8NE79 360 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 OR2AK2Q8NG84 335 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 MARCH1Q8TCQ1 289 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 LEAP2Q969E1 77 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 ST6GALNAC6Q969X2 333 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 AKR1E2Q96JD6 320 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 SCGB3A2Q96PL1 93 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 MARVELD1Q9BSK0 173 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 ABHD14AQ9BUJ0 271 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 MMP28Q9H239 520 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 IFI27L2Q9H2X8 130 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 GSX1Q9H4S2 264 aaPredicted RBP5.86□□□□□ -1.47
NUP54-204ENST00000506098 C7orf69Q9H7B7 122 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 SIRT7Q9NRC8 400 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 PIPOXQ9P0Z9 390 aa5.86□□□□□ -1.47
NUP54-204ENST00000506098 SVEP1Q4LDE5 3571 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 CENPVL3A0A0U1RRI6 287 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 LY6LH3BQJ8 138 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 BUB1B-PAK6H3BSN5 160 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 H7C2Y5 167 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 M0QZK8 103 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 GPR31O00270 319 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 RAB29O14966 203 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 PROP1O75360 226 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 AVPP01185 164 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 FSHBP01225 129 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 IGHV3-7P01780 117 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 CTSDP07339 412 aaPredicted RBP5.85□□□□□ -1.47
NUP54-204ENST00000506098 OR8U9P0C7N5 309 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 GNG10P50151 68 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 DLX1P56177 255 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 FXYD4P59646 89 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 RND3P61587 244 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 DHODHQ02127 395 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 KLRD1Q13241 179 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 MINOS1Q5TGZ0 78 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 ZNF818PQ6ZRF7 136 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 C1orf229Q6ZS94 237 aaPredicted RBP5.85□□□□□ -1.47
NUP54-204ENST00000506098 PNKDQ8N490 385 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 OR4P4Q8NGL7 312 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 OR8U1Q8NH10 309 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 SECTM1Q8WVN6 248 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 CREB3L1Q96BA8 519 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 ABHD14BQ96IU4 210 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 C18orf12Q96KH6 178 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 SSX3Q99909 188 aa5.85□□□□□ -1.47
NUP54-204ENST00000506098 RTBDNQ9BSG5 229 aaPredicted RBP5.85□□□□□ -1.47
NUP54-204ENST00000506098 PCGF1Q9BSM1 259 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms