RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.63□□□□□ -1.197e-8■■■■□ 20.9
TPM3-218ENST00000505010 IGHV2-26A0A0B4J1V2 119 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 BOLA2-SMG1P6H3BVE0 249 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 J3QR06 171 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 RAB29O14966 203 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 ADAP1O75689 374 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 B3GALNT1O75752 331 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 SERPINE2P07093 398 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 HNRNPCP07910 306 aaKnown RBP eCLIP7.62□□□□□ -1.19
TPM3-218ENST00000505010 HOXB5P09067 269 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 USF1P22415 310 aaPredicted RBP7.62□□□□□ -1.19
TPM3-218ENST00000505010 UCP1P25874 307 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 IL3RAP26951 378 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 RPL30P62888 115 aaKnown RBP7.62□□□□□ -1.19
TPM3-218ENST00000505010 EIF4EBP1Q13541 118 aaPredicted RBP7.62□□□□□ -1.19
TPM3-218ENST00000505010 DCAF12L2Q5VW00 463 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 TMEM268Q5VZI3 342 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 ZNF66Q6ZN08 573 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 ZNF695Q8IW36 515 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 ODF3L1Q8IXM7 274 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 ABHD12Q8N2K0 398 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 PNKDQ8N490 385 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 Q8N7P7 452 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 C8orf31Q8N9H6 132 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 OR13D1Q8NGV5 346 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 RNASE11Q8TAA1 199 aaKnown RBP7.62□□□□□ -1.19
TPM3-218ENST00000505010 LHFPL5Q8TAF8 219 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 MSI2Q96DH6 328 aaKnown RBP7.62□□□□□ -1.19
TPM3-218ENST00000505010 S1PR3Q99500 378 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 HSD17B10Q99714 261 aaKnown RBP7.62□□□□□ -1.19
TPM3-218ENST00000505010 PDCD10Q9BUL8 212 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 METTL8Q9H825 291 aaKnown RBP7.62□□□□□ -1.19
TPM3-218ENST00000505010 MMP26Q9NRE1 261 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 CR1P17927 2039 aa7.62□□□□□ -1.19
TPM3-218ENST00000505010 C13orf42A0A1B0GVH6 325 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 C5orf51A6NDU8 294 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 DBX1A6NMT0 343 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 LINC00473A8K010 186 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 SMLR1H3BR10 107 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 IFNA21P01568 189 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 GIPP09681 153 aaPredicted RBP7.61□□□□□ -1.19
TPM3-218ENST00000505010 DUTP33316 252 aaKnown RBP7.61□□□□□ -1.19
TPM3-218ENST00000505010 THBS3P49746 956 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 DVL1P1P54792 670 aaPredicted RBP7.61□□□□□ -1.19
TPM3-218ENST00000505010 PRRX1P54821 245 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 H2BFSP57053 126 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 PAX2Q02962 417 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 KLRD1Q13241 179 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 GSG1LQ6UXU4 331 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 ZNF833PQ6ZTB9 187 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 VMO1Q7Z5L0 202 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 TCTE3Q8IZS6 198 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 SPAG16Q8N0X2 631 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 LINC00311Q8N616 119 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 SLC35G3Q8N808 338 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 DRAXINQ8NBI3 349 aaPredicted RBP7.61□□□□□ -1.19
TPM3-218ENST00000505010 ZNF596Q8TC21 504 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 GLYATL2Q8WU03 294 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 PCGF1Q9BSM1 259 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 SIRPDQ9H106 197 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 RAB18Q9NP72 206 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 GAB2Q9UQC2 676 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 AMMECR1Q9Y4X0 333 aaPredicted RBP7.61□□□□□ -1.19
TPM3-218ENST00000505010 KPTNQ9Y664 436 aa7.61□□□□□ -1.19
TPM3-218ENST00000505010 RAMP3O60896 148 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 FCGR3BO75015 233 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 TOX4O94842 621 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 ARG1P05089 322 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 PRTN3P24158 256 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 KIR2DS2P43631 304 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 LPAR6P43657 344 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 REG1BP48304 166 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 AKR1C2P52895 323 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 LINC00205P59089 165 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 RAP2BP61225 183 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 ZNF816Q0VGE8 651 aaPredicted RBP7.6□□□□□ -1.19
TPM3-218ENST00000505010 HLA-DRB5Q30154 266 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 ZFP69Q49AA0 526 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 GGNBP1Q5YKI7 109 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 NCR3LG1Q68D85 454 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 C1orf229Q6ZS94 237 aaPredicted RBP7.6□□□□□ -1.19
TPM3-218ENST00000505010 LYZL2Q7Z4W2 148 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 PDZD9Q8IXQ8 264 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 SELENOHQ8IZQ5 122 aaKnown RBP7.6□□□□□ -1.19
TPM3-218ENST00000505010 LRTM2Q8N967 370 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 BEND2Q8NDZ0 799 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 TNFRSF14Q92956 283 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 RBPMSQ93062 196 aaKnown RBP7.6□□□□□ -1.19
TPM3-218ENST00000505010 IL22RA2Q969J5 263 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 PPP1R14BQ96C90 147 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 WDR89Q96FK6 387 aaPredicted RBP7.6□□□□□ -1.19
TPM3-218ENST00000505010 ADTRPQ96IZ2 230 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 TMEM56Q96MV1 263 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 ZNF251Q9BRH9 671 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 MRPL20Q9BYC9 149 aaKnown RBP7.6□□□□□ -1.19
TPM3-218ENST00000505010 HEXA-AS1Q9H8Q6 139 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 PRELID3BQ9Y3B1 194 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 INSIG2Q9Y5U4 225 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 TMEM56-RWDD3S4R434 201 aa7.6□□□□□ -1.19
TPM3-218ENST00000505010 PIGBOS1A0A0B4J2F0 54 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms