RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 DRAXINQ8NBI3 349 aaPredicted RBP3.94□□□□□ -1.78
LMNB1-208ENST00000504788 OR51S1Q8NGJ8 323 aa3.94□□□□□ -1.78
LMNB1-208ENST00000504788 OR5H2Q8NGV7 314 aa3.94□□□□□ -1.78
LMNB1-208ENST00000504788 OR6F1Q8NGZ6 308 aa3.94□□□□□ -1.78
LMNB1-208ENST00000504788 WIPF2Q8TF74 440 aaPredicted RBP3.94□□□□□ -1.78
LMNB1-208ENST00000504788 CREB3L1Q96BA8 519 aa3.94□□□□□ -1.78
LMNB1-208ENST00000504788 EAF1Q96JC9 268 aaPredicted RBP3.94□□□□□ -1.78
LMNB1-208ENST00000504788 SSX3Q99909 188 aa3.94□□□□□ -1.78
LMNB1-208ENST00000504788 MS4A7Q9GZW8 240 aaPredicted RBP3.94□□□□□ -1.78
LMNB1-208ENST00000504788 TCF19Q9Y242 345 aa3.94□□□□□ -1.78
LMNB1-208ENST00000504788 VSIG4Q9Y279 399 aa3.94□□□□□ -1.78
LMNB1-208ENST00000504788 POMT1Q9Y6A1 747 aa3.94□□□□□ -1.78
LMNB1-208ENST00000504788 STAB1Q9NY15 2570 aa3.94□□□□□ -1.78
LMNB1-208ENST00000504788 VWFP04275 2813 aa3.94□□□□□ -1.78
LMNB1-208ENST00000504788 H3BUX3 64 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 HSPA12AO43301 675 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 RAMP3O60896 148 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 NDUFA3O95167 84 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 GAPDHP04406 335 aaKnown RBP3.93□□□□□ -1.78
LMNB1-208ENST00000504788 RNASE1P07998 156 aaKnown RBP3.93□□□□□ -1.78
LMNB1-208ENST00000504788 P0C879 139 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 HNF1AP20823 631 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 CNTFRP26992 372 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 CD1BP29016 333 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 MECP2P51608 486 aaKnown RBP3.93□□□□□ -1.78
LMNB1-208ENST00000504788 CCR6P51684 374 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 LUMP51884 338 aaPredicted RBP3.93□□□□□ -1.78
LMNB1-208ENST00000504788 F2RL1P55085 397 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 ARPC4P59998 168 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 RND3P61587 244 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 UBA52P62987 128 aaKnown RBP3.93□□□□□ -1.78
LMNB1-208ENST00000504788 DHODHQ02127 395 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 BAMBIQ13145 260 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 ASAH1Q13510 395 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 LRRC75BQ2VPJ9 315 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 GLDNQ6ZMI3 551 aaPredicted RBP3.93□□□□□ -1.78
LMNB1-208ENST00000504788 TGIF2LXQ8IUE1 241 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 TOMM5Q8N4H5 51 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 TMEM86BQ8N661 226 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 OR10X1Q8NGY0 326 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 TAF15Q92804 592 aaKnown RBP eCLIP3.93□□□□□ -1.78
LMNB1-208ENST00000504788 TOMM40LQ969M1 308 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 CITED4Q96RK1 184 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 GINS4Q9BRT9 223 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 SLC2A9Q9NRM0 540 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 VPREB3Q9UKI3 123 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 A0A0A6YYJ9 748 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 IGHV3-72A0A0B4J1Y9 119 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 TOR1AO14656 332 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 TXNL1O43396 289 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 PGLYRP1O75594 196 aaPredicted RBP3.93□□□□□ -1.78
LMNB1-208ENST00000504788 NDUFB6O95139 128 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 IGKV1D-33P01593 117 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 IGKV1-33P01594 117 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 SNRNP70P08621 437 aaKnown RBP3.93□□□□□ -1.78
LMNB1-208ENST00000504788 PI3P19957 117 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 SRP14P37108 136 aaKnown RBP3.93□□□□□ -1.78
LMNB1-208ENST00000504788 CEACAM3P40198 252 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 ZNF846Q147U1 533 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 MEF2DQ14814 521 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 SURF2Q15527 256 aaPredicted RBP3.93□□□□□ -1.78
LMNB1-208ENST00000504788 POU2AF1Q16633 256 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 TMEM177Q53S58 311 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 C11orf88Q6PI97 169 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 IDO2Q6ZQW0 420 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 Q8N2B8 174 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 Q8N9W7 124 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 ZBTB34Q8NCN2 500 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 DUSP18Q8NEJ0 188 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 NPBQ8NG41 125 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 LHFPL5Q8TAF8 219 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 MARCH1Q8TCQ1 289 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 GLYATL2Q8WU03 294 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 SECTM1Q8WVN6 248 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 SSMEM1Q8WWF3 244 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 RPEQ96AT9 228 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 AKR1E2Q96JD6 320 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 RBM14Q96PK6 669 aaKnown RBP3.93□□□□□ -1.78
LMNB1-208ENST00000504788 C7orf50Q9BRJ6 194 aaKnown RBP3.93□□□□□ -1.78
LMNB1-208ENST00000504788 WDR12Q9GZL7 423 aaKnown RBP3.93□□□□□ -1.78
LMNB1-208ENST00000504788 PGPEP1Q9NXJ5 209 aa3.93□□□□□ -1.78
LMNB1-208ENST00000504788 AMMECR1Q9Y4X0 333 aaPredicted RBP3.93□□□□□ -1.78
LMNB1-208ENST00000504788 A0A1B0GW64 132 aa3.92□□□□□ -1.78
LMNB1-208ENST00000504788 M0R1X1 148 aa3.92□□□□□ -1.78
LMNB1-208ENST00000504788 GPR31O00270 319 aa3.92□□□□□ -1.78
LMNB1-208ENST00000504788 RBFOX2O43251 390 aaKnown RBP eCLIP3.92□□□□□ -1.786e-10■■■■□ 19.3
LMNB1-208ENST00000504788 LYRM1O43325 122 aa3.92□□□□□ -1.78
LMNB1-208ENST00000504788 TSPAN9O75954 239 aa3.92□□□□□ -1.78
LMNB1-208ENST00000504788 SLC22A5O76082 557 aa3.92□□□□□ -1.78
LMNB1-208ENST00000504788 CTSDP07339 412 aaPredicted RBP3.92□□□□□ -1.78
LMNB1-208ENST00000504788 F2RP25116 425 aa3.92□□□□□ -1.78
LMNB1-208ENST00000504788 GPR12P47775 334 aa3.92□□□□□ -1.78
LMNB1-208ENST00000504788 LGALS4P56470 323 aa3.92□□□□□ -1.78
LMNB1-208ENST00000504788 FXYD4P59646 89 aa3.92□□□□□ -1.78
LMNB1-208ENST00000504788 BLCAPP62952 87 aa3.92□□□□□ -1.78
LMNB1-208ENST00000504788 KRTAP24-1Q3LI83 254 aa3.92□□□□□ -1.78
LMNB1-208ENST00000504788 C19orf54Q5BKX5 351 aa3.92□□□□□ -1.78
LMNB1-208ENST00000504788 LCE3BQ5TA77 95 aa3.92□□□□□ -1.78
LMNB1-208ENST00000504788 CCDC144NLQ6NUI1 221 aa3.92□□□□□ -1.78
LMNB1-208ENST00000504788 ZNF66Q6ZN08 573 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms