RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 EDDM3BP56851 147 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 BRWD1-AS2P59051 145 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 RAB2AP61019 212 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 RPP30P78346 268 aaKnown RBP8.12□□□□□ -1.11
COL1A1-210ENST00000504289 TLE1Q04724 770 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 TLE4Q04727 773 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 C17orf58Q2M2W7 97 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 ODF3L1Q8IXM7 274 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 ZNF295-AS1Q8N0V1 137 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 TPRX1Q8N7U7 411 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 HSD17B11Q8NBQ5 300 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 OR2G3Q8NGZ4 309 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 RFESDQ8TAC1 157 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 UBALD1Q8TB05 177 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 SCGB1C1Q8TD33 95 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 PINX1Q96BK5 328 aaKnown RBP8.12□□□□□ -1.11
COL1A1-210ENST00000504289 NARS2Q96I59 477 aaKnown RBP8.12□□□□□ -1.11
COL1A1-210ENST00000504289 ABHD14AQ9BUJ0 271 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 IFI27L2Q9H2X8 130 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 SAP30LQ9HAJ7 183 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 IDI2-AS1Q9NZ38 188 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 PLA2G2EQ9NZK7 142 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 RPUSD1Q9UJJ7 312 aaKnown RBP8.12□□□□□ -1.11
COL1A1-210ENST00000504289 PPIAL4AQ9Y536 164 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 TIMM9Q9Y5J7 89 aa8.12□□□□□ -1.11
COL1A1-210ENST00000504289 IGF2RP11717 2491 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 LOC105371267A0A1B0GV96 52 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 MARCH11A6NNE9 402 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 TNFRSF13BO14836 293 aaPredicted RBP8.11□□□□□ -1.11
COL1A1-210ENST00000504289 ST8SIA5O15466 376 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 CST7O76096 145 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 S1PR2O95136 353 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 SNAPINO95295 136 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 CYB5R3P00387 301 aaPredicted RBP8.11□□□□□ -1.11
COL1A1-210ENST00000504289 KRASP01116 189 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 NQO2P16083 231 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 OMGP23515 440 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 SNCAP37840 140 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 ATP5IP56385 69 aaPredicted RBP8.11□□□□□ -1.11
COL1A1-210ENST00000504289 ERVK-16P61578 105 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 PMS2P11Q13670 270 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 CLINT1Q14677 625 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 POU2AF1Q16633 256 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 LRRC75BQ2VPJ9 315 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 PRR30Q53SZ7 412 aaPredicted RBP8.11□□□□□ -1.11
COL1A1-210ENST00000504289 SPRNQ5BIV9 151 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 DHRS7BQ6IAN0 325 aaPredicted RBP8.11□□□□□ -1.11
COL1A1-210ENST00000504289 FAM71F2Q6NXP2 309 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 CENPVQ7Z7K6 275 aaPredicted RBP8.11□□□□□ -1.11
COL1A1-210ENST00000504289 ZNF429Q86V71 674 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 ZNF808Q8N4W9 903 aaPredicted RBP8.11□□□□□ -1.11
COL1A1-210ENST00000504289 ZNF439Q8NDP4 499 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 OR4S2Q8NH73 311 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 DDB2Q92466 427 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 R3HDM4Q96D70 268 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 S1PR3Q99500 378 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 TREM1Q9NP99 234 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 KCNJ16Q9NPI9 418 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 TMEM106BQ9NUM4 274 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 KPTNQ9Y664 436 aa8.11□□□□□ -1.11
COL1A1-210ENST00000504289 DYSFO75923 2080 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 DSCAML1Q8TD84 2053 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 DSCAMO60469 2012 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 LINC00473A8K010 186 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 E7EQL1 145 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 F8W036 122 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 M0R1X1 148 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 GPR37O15354 613 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 RAMP3O60896 148 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 PROP1O75360 226 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 NDUFS6O75380 124 aaKnown RBP8.1□□□□□ -1.11
COL1A1-210ENST00000504289 DAOP14920 347 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 G6PCP35575 357 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 SPCS3P61009 180 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 GNB2P62879 340 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 CCL8P80075 99 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 ZNF816Q0VGE8 651 aaPredicted RBP8.1□□□□□ -1.11
COL1A1-210ENST00000504289 AKR1C8PQ5T2L2 129 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 NCR3LG1Q68D85 454 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 HEPN1Q6WQI6 88 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 SLC25A48Q6ZT89 311 aaKnown RBP8.1□□□□□ -1.11
COL1A1-210ENST00000504289 DMRTC2Q8IXT2 367 aaPredicted RBP8.1□□□□□ -1.11
COL1A1-210ENST00000504289 ZNF525Q8N782 197 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 ZNF596Q8TC21 504 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 RBMXL1Q96E39 390 aaKnown RBP8.1□□□□□ -1.11
COL1A1-210ENST00000504289 CLCC1Q96S66 551 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 CCL13Q99616 98 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 ZNF251Q9BRH9 671 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 DCTN5Q9BTE1 182 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 GGACTQ9BVM4 153 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 RBKSQ9H477 322 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 UNKLQ9H9P5 680 aaKnown RBP8.1□□□□□ -1.11
COL1A1-210ENST00000504289 DYNLRB1Q9NP97 96 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 SH3BGRL2Q9UJC5 107 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 PRELID1Q9Y255 219 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 PCNX1Q96RV3 2341 aa8.1□□□□□ -1.11
COL1A1-210ENST00000504289 ICE1Q9Y2F5 2266 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 DMXL2Q8TDJ6 3036 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 TRBV23-1A0A0A0MS06 115 aa8.09□□□□□ -1.11
COL1A1-210ENST00000504289 IGHV3-43A0A0B4J1X8 118 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms