RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 SERPINB10P48595 397 aa17.19■□□□□ 0.34
LSM6-203ENST00000503982 ZNF260Q3ZCT1 412 aa17.19■□□□□ 0.34
LSM6-203ENST00000503982 ZNF491Q8N8L2 437 aa17.19■□□□□ 0.34
LSM6-203ENST00000503982 DRAXINQ8NBI3 349 aaPredicted RBP17.19■□□□□ 0.34
LSM6-203ENST00000503982 OR1N2Q8NGR9 330 aa17.19■□□□□ 0.34
LSM6-203ENST00000503982 OR10R2Q8NGX6 335 aa17.19■□□□□ 0.34
LSM6-203ENST00000503982 UBE2E2Q96LR5 201 aa17.19■□□□□ 0.34
LSM6-203ENST00000503982 H0YJW9 148 aa17.18■□□□□ 0.34
LSM6-203ENST00000503982 MFNGO00587 321 aa17.18■□□□□ 0.34
LSM6-203ENST00000503982 LY86O95711 162 aa17.18■□□□□ 0.34
LSM6-203ENST00000503982 OR8U8P0C7N1 319 aa17.18■□□□□ 0.34
LSM6-203ENST00000503982 SNRPBP14678 240 aaKnown RBP17.18■□□□□ 0.34
LSM6-203ENST00000503982 PPIFP30405 207 aaKnown RBP17.18■□□□□ 0.34
LSM6-203ENST00000503982 RAB9AP51151 201 aa17.18■□□□□ 0.34
LSM6-203ENST00000503982 PLAC9Q5JTB6 97 aa17.18■□□□□ 0.34
LSM6-203ENST00000503982 IDNKQ5T6J7 187 aa17.18■□□□□ 0.34
LSM6-203ENST00000503982 ZNF660Q6AZW8 331 aaPredicted RBP17.18■□□□□ 0.34
LSM6-203ENST00000503982 C11orf87Q6NUJ2 197 aa17.18■□□□□ 0.34
LSM6-203ENST00000503982 SLC25A38Q96DW6 304 aa17.18■□□□□ 0.34
LSM6-203ENST00000503982 CMTM3Q96MX0 182 aa17.18■□□□□ 0.34
LSM6-203ENST00000503982 PRR25Q96S07 402 aa17.18■□□□□ 0.34
LSM6-203ENST00000503982 RHBDL2Q9NX52 303 aa17.18■□□□□ 0.34
LSM6-203ENST00000503982 METTL1Q9UBP6 276 aaKnown RBP17.18■□□□□ 0.34
LSM6-203ENST00000503982 A0A075B6Q4 140 aa17.17■□□□□ 0.34
LSM6-203ENST00000503982 TRDCB7Z8K6 153 aa17.17■□□□□ 0.34
LSM6-203ENST00000503982 ITGB1BP1O14713 200 aa17.17■□□□□ 0.34
LSM6-203ENST00000503982 BET1O15155 118 aa17.17■□□□□ 0.34
LSM6-203ENST00000503982 RBBP9O75884 186 aa17.17■□□□□ 0.34
LSM6-203ENST00000503982 APOA2P02652 100 aa17.17■□□□□ 0.34
LSM6-203ENST00000503982 HIST1H1DP16402 221 aaKnown RBP17.17■□□□□ 0.34
LSM6-203ENST00000503982 RPS16P62249 146 aaKnown RBP17.17■□□□□ 0.34
LSM6-203ENST00000503982 ZNF616Q08AN1 781 aa17.17■□□□□ 0.34
LSM6-203ENST00000503982 TMEM267Q0VDI3 215 aaPredicted RBP17.17■□□□□ 0.34
LSM6-203ENST00000503982 CLVS1Q8IUQ0 354 aaPredicted RBP17.17■□□□□ 0.34
LSM6-203ENST00000503982 ACOT12Q8WYK0 555 aa17.17■□□□□ 0.34
LSM6-203ENST00000503982 RAB3CQ96E17 227 aa17.17■□□□□ 0.34
LSM6-203ENST00000503982 B9D2Q9BPU9 175 aa17.17■□□□□ 0.34
LSM6-203ENST00000503982 DCSTAMPQ9H295 470 aa17.17■□□□□ 0.34
LSM6-203ENST00000503982 KCNK7Q9Y2U2 307 aa17.17■□□□□ 0.34
LSM6-203ENST00000503982 RORCP51449 518 aa17.16■□□□□ 0.34
LSM6-203ENST00000503982 CX3CL1P78423 397 aa17.16■□□□□ 0.34
LSM6-203ENST00000503982 NDPQ00604 133 aa17.16■□□□□ 0.34
LSM6-203ENST00000503982 MOGAT2Q3SYC2 334 aa17.16■□□□□ 0.34
LSM6-203ENST00000503982 UNQ5815/PRO19632Q6UWF5 114 aa17.16■□□□□ 0.34
LSM6-203ENST00000503982 CASTOR1Q8WTX7 329 aa17.16■□□□□ 0.34
LSM6-203ENST00000503982 RBM38Q9H0Z9 239 aaKnown RBP17.16■□□□□ 0.34
LSM6-203ENST00000503982 RDH8Q9NYR8 311 aa17.16■□□□□ 0.34
LSM6-203ENST00000503982 FOXA2Q9Y261 457 aaPredicted RBP17.16■□□□□ 0.34
LSM6-203ENST00000503982 RBM7Q9Y580 266 aaKnown RBP17.16■□□□□ 0.34
LSM6-203ENST00000503982 ZNF701M0R085 212 aaPredicted RBP17.15■□□□□ 0.34
LSM6-203ENST00000503982 M0R1X1 148 aa17.15■□□□□ 0.34
LSM6-203ENST00000503982 IGLV1-40P01703 118 aa17.15■□□□□ 0.34
LSM6-203ENST00000503982 CD40LGP29965 261 aa17.15■□□□□ 0.34
LSM6-203ENST00000503982 GNB1P62873 340 aa17.15■□□□□ 0.34
LSM6-203ENST00000503982 PPP1R27Q86WC6 154 aa17.15■□□□□ 0.34
LSM6-203ENST00000503982 OR5H6Q8NGV6 325 aa17.15■□□□□ 0.34
LSM6-203ENST00000503982 TSNAXQ99598 290 aaKnown RBP17.15■□□□□ 0.34
LSM6-203ENST00000503982 AGMATQ9BSE5 352 aa17.15■□□□□ 0.34
LSM6-203ENST00000503982 FAM103A1Q9BTL3 118 aaKnown RBP17.15■□□□□ 0.34
LSM6-203ENST00000503982 FBXO7Q9Y3I1 522 aa17.15■□□□□ 0.34
LSM6-203ENST00000503982 CEPT1Q9Y6K0 416 aa17.15■□□□□ 0.34
LSM6-203ENST00000503982 I3L521 148 aa17.14■□□□□ 0.33
LSM6-203ENST00000503982 FCN1O00602 326 aa17.14■□□□□ 0.33
LSM6-203ENST00000503982 FHL3Q13643 280 aa17.14■□□□□ 0.33
LSM6-203ENST00000503982 PSG5Q15238 335 aa17.14■□□□□ 0.33
LSM6-203ENST00000503982 SRSF7Q16629 238 aaKnown RBP eCLIP17.14■□□□□ 0.33
LSM6-203ENST00000503982 TCTEX1D1Q8N7M0 179 aa17.14■□□□□ 0.33
LSM6-203ENST00000503982 MINDY2Q8NBR6 621 aa17.14■□□□□ 0.33
LSM6-203ENST00000503982 OR5AN1Q8NGI8 311 aa17.14■□□□□ 0.33
LSM6-203ENST00000503982 OR4A4PQ8NGN8 299 aa17.14■□□□□ 0.33
LSM6-203ENST00000503982 MYOZ3Q8TDC0 251 aa17.14■□□□□ 0.33
LSM6-203ENST00000503982 ISOC1Q96CN7 298 aa17.14■□□□□ 0.33
LSM6-203ENST00000503982 RNF5Q99942 180 aa17.14■□□□□ 0.33
LSM6-203ENST00000503982 ALX4Q9H161 411 aaPredicted RBP17.14■□□□□ 0.33
LSM6-203ENST00000503982 ATG5Q9H1Y0 275 aa17.14■□□□□ 0.33
LSM6-203ENST00000503982 FABP7O15540 132 aa17.13■□□□□ 0.33
LSM6-203ENST00000503982 CA2P00918 260 aa17.13■□□□□ 0.33
LSM6-203ENST00000503982 GNB3P16520 340 aa17.13■□□□□ 0.33
LSM6-203ENST00000503982 TALDO1P37837 337 aa17.13■□□□□ 0.33
LSM6-203ENST00000503982 CBX3Q13185 183 aa17.13■□□□□ 0.33
LSM6-203ENST00000503982 ARFRP1Q13795 201 aa17.13■□□□□ 0.33
LSM6-203ENST00000503982 ACTBL2Q562R1 376 aa17.13■□□□□ 0.33
LSM6-203ENST00000503982 UBE2NLQ5JXB2 153 aa17.13■□□□□ 0.33
LSM6-203ENST00000503982 PDPNQ86YL7 162 aa17.13■□□□□ 0.33
LSM6-203ENST00000503982 OR10J5Q8NHC4 309 aa17.13■□□□□ 0.33
LSM6-203ENST00000503982 MAFIPQ8WZ33 124 aa17.13■□□□□ 0.33
LSM6-203ENST00000503982 AP3S1Q92572 193 aa17.13■□□□□ 0.33
LSM6-203ENST00000503982 MS4A10Q96PG2 267 aa17.13■□□□□ 0.33
LSM6-203ENST00000503982 ZNF355PQ9NSJ1 428 aa17.13■□□□□ 0.33
LSM6-203ENST00000503982 SLC35D1Q9NTN3 355 aa17.13■□□□□ 0.33
LSM6-203ENST00000503982 GAB2Q9UQC2 676 aa17.13■□□□□ 0.33
LSM6-203ENST00000503982 IGKV1-6A0A0C4DH72 117 aa17.12■□□□□ 0.33
LSM6-203ENST00000503982 H3BMQ9 156 aa17.12■□□□□ 0.33
LSM6-203ENST00000503982 OVOL1O14753 267 aa17.12■□□□□ 0.33
LSM6-203ENST00000503982 ZNF182P17025 639 aaPredicted RBP17.12■□□□□ 0.33
LSM6-203ENST00000503982 LINC00205P59089 165 aa17.12■□□□□ 0.33
LSM6-203ENST00000503982 RUNX1Q01196 453 aa17.12■□□□□ 0.33
LSM6-203ENST00000503982 KIAA0141Q14154 515 aaPredicted RBP17.12■□□□□ 0.33
LSM6-203ENST00000503982 SPCS2Q15005 226 aa17.12■□□□□ 0.33
LSM6-203ENST00000503982 Q6ZS49 121 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms