RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 ESCO2Q56NI9 601 aa5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 CLEC2AQ6UVW9 174 aa5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 GSG1LQ6UXU4 331 aa5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 ABHD12Q8N2K0 398 aa5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 ZBTB8BQ8NAP8 495 aaPredicted RBP5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 OR4P4Q8NGL7 312 aa5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 OR4D5Q8NGN0 318 aa5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 OR9G1Q8NH87 305 aa5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 PPP1R1CQ8WVI7 109 aa5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 TCTEX1D2Q8WW35 142 aa5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 ASB13Q8WXK3 278 aa5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 TNFRSF14Q92956 283 aa5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 RBPMSQ93062 196 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 C2orf50Q96LR7 162 aa5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 HSD17B10Q99714 261 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 RNF126Q9BV68 326 aa5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 MRPL20Q9BYC9 149 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 NMES1Q9C002 83 aa5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 SIRPDQ9H106 197 aa5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 C11orf1Q9H5F2 150 aa5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 METTL8Q9H825 291 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 BARX1Q9HBU1 254 aaPredicted RBP5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 LIN7CQ9NUP9 197 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 ONECUT1Q9UBC0 465 aa5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 POLR3KQ9Y2Y1 108 aaPredicted RBP5.61□□□□□ -1.51
TOPBP1-203ENST00000503464 PDZD2O15018 2839 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 DUXBA0A1W2PPF3 345 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 RNF212BA8MTL3 300 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 ODF3BA8MYP8 253 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 LY6LH3BQJ8 138 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 M0R1W7 72 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 RAB29O14966 203 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 PITX3O75364 302 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 MPC2O95563 127 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 LYL1P12980 280 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 HOXB4P17483 251 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 CXCL2P19875 107 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 VDAC1P21796 283 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 COX7A1P24310 79 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 REG1BP48304 166 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 ZNF816Q0VGE8 651 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 KLRD1Q13241 179 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 RAB32Q13637 225 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 IAH1Q2TAA2 248 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 HLA-DRB5Q30154 266 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 DEFB113Q30KQ7 82 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 LGALSLQ3ZCW2 172 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 LRRC37A5PQ49AS3 106 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 LCE2CQ5TA81 110 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 C11orf87Q6NUJ2 197 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 ZNF695Q8IW36 515 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 SPAG16Q8N0X2 631 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 PNKDQ8N490 385 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 KIR3DL3Q8N743 410 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 GPR146Q96CH1 333 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 RRNAD1Q96FB5 475 aaKnown RBP5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 TBX15Q96SF7 602 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 PDCD10Q9BUL8 212 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 CLEC7AQ9BXN2 247 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 SIRT7Q9NRC8 400 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 FAM212BQ9NTI7 297 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 BEX4Q9NWD9 120 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 OR5AC2Q9NZP5 309 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 MBD2Q9UBB5 411 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 RCL1Q9Y2P8 373 aaKnown RBP5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 TMED3Q9Y3Q3 217 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 CSMD1Q96PZ7 3565 aa5.6□□□□□ -1.51
TOPBP1-203ENST00000503464 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 PRRC2AP48634 2157 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 A0A1W2PPH5 198 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 RNF222A6NCQ9 220 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 RNASEK-C17orf49H0YIS7 233 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 H0YJW9 148 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 BUB1B-PAK6H3BSN5 160 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 RBFOX2O43251 390 aaKnown RBP eCLIP5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 KCNAB3O43448 404 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 ENSAO43768 121 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 FCGR3BO75015 233 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 MBPP02686 304 aaPredicted RBP5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 IGKV1-16P04430 117 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 SERPINE2P07093 398 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 SLC25A4P12235 298 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 RPA2P15927 270 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 PRTN3P24158 256 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 PSMB6P28072 239 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 S100GP29377 79 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 G6PCP35575 357 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 THBS3P49746 956 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 IFITM2Q01629 132 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 CATR1Q13166 79 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 CLEC12BQ2HXU8 276 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 MIDNQ504T8 468 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 FBLN7Q53RD9 439 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 FAM71F2Q6NXP2 309 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 VMO1Q7Z5L0 202 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 TCTEX1D1Q8N7M0 179 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 BEND2Q8NDZ0 799 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 DMBX1Q8NFW5 382 aa5.59□□□□□ -1.51
TOPBP1-203ENST00000503464 OR11H6Q8NGC7 330 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms