RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 FAM96BQ9Y3D0 163 aa16.46■□□□□ 0.23
CDC42SE2-206ENST00000503291 F8P00451 2351 aa16.46■□□□□ 0.23
CDC42SE2-206ENST00000503291 HIVEP2P31629 2446 aa16.46■□□□□ 0.23
CDC42SE2-206ENST00000503291 A0A1W2PPI3 338 aa16.46■□□□□ 0.23
CDC42SE2-206ENST00000503291 TXNL1O43396 289 aa16.46■□□□□ 0.23
CDC42SE2-206ENST00000503291 HNF1AP20823 631 aa16.46■□□□□ 0.23
CDC42SE2-206ENST00000503291 SRP14P37108 136 aaKnown RBP16.46■□□□□ 0.23
CDC42SE2-206ENST00000503291 CCDC144NLQ6NUI1 221 aa16.46■□□□□ 0.23
CDC42SE2-206ENST00000503291 KCTD9Q7L273 389 aa16.46■□□□□ 0.23
CDC42SE2-206ENST00000503291 ZNF383Q8NA42 475 aa16.46■□□□□ 0.23
CDC42SE2-206ENST00000503291 CAPSLQ8WWF8 208 aa16.46■□□□□ 0.23
CDC42SE2-206ENST00000503291 TEX13DA0A0J9YY54 714 aaPredicted RBP16.45■□□□□ 0.22
CDC42SE2-206ENST00000503291 THBS3P49746 956 aa16.45■□□□□ 0.22
CDC42SE2-206ENST00000503291 TMEM128Q5BJH2 165 aa16.45■□□□□ 0.22
CDC42SE2-206ENST00000503291 MOB3BQ86TA1 216 aa16.45■□□□□ 0.22
CDC42SE2-206ENST00000503291 OR8H3Q8N146 312 aa16.45■□□□□ 0.22
CDC42SE2-206ENST00000503291 CHPT1Q8WUD6 406 aa16.45■□□□□ 0.22
CDC42SE2-206ENST00000503291 TCTEX1D2Q8WW35 142 aa16.45■□□□□ 0.22
CDC42SE2-206ENST00000503291 NAV3Q8IVL0 2385 aa16.45■□□□□ 0.22
CDC42SE2-206ENST00000503291 CRYM-AS1A6NIL9 109 aa16.45■□□□□ 0.22
CDC42SE2-206ENST00000503291 INMT-MINDY4F8WBC2 141 aa16.45■□□□□ 0.22
CDC42SE2-206ENST00000503291 PEX14O75381 377 aa16.45■□□□□ 0.22
CDC42SE2-206ENST00000503291 F2RP25116 425 aa16.45■□□□□ 0.22
CDC42SE2-206ENST00000503291 C9orf139Q6ZV77 190 aa16.45■□□□□ 0.22
CDC42SE2-206ENST00000503291 ADTRPQ96IZ2 230 aa16.45■□□□□ 0.22
CDC42SE2-206ENST00000503291 ALX4Q9H161 411 aaPredicted RBP16.45■□□□□ 0.22
CDC42SE2-206ENST00000503291 IGHV3-72A0A0B4J1Y9 119 aa16.44■□□□□ 0.22
CDC42SE2-206ENST00000503291 RNF212BA8MTL3 300 aa16.44■□□□□ 0.22
CDC42SE2-206ENST00000503291 TIMM23O14925 209 aa16.44■□□□□ 0.22
CDC42SE2-206ENST00000503291 VSIG10L2P0DP72 767 aa16.44■□□□□ 0.22
CDC42SE2-206ENST00000503291 MECP2P51608 486 aaKnown RBP16.44■□□□□ 0.22
CDC42SE2-206ENST00000503291 TAS2R31P59538 309 aa16.44■□□□□ 0.22
CDC42SE2-206ENST00000503291 DHODHQ02127 395 aa16.44■□□□□ 0.22
CDC42SE2-206ENST00000503291 CATR1Q13166 79 aa16.44■□□□□ 0.22
CDC42SE2-206ENST00000503291 SGPP2Q8IWX5 399 aa16.44■□□□□ 0.22
CDC42SE2-206ENST00000503291 OR5AN1Q8NGI8 311 aa16.44■□□□□ 0.22
CDC42SE2-206ENST00000503291 DDB2Q92466 427 aa16.44■□□□□ 0.22
CDC42SE2-206ENST00000503291 RBMXL1Q96E39 390 aaKnown RBP16.44■□□□□ 0.22
CDC42SE2-206ENST00000503291 MEGF9Q9H1U4 602 aa16.44■□□□□ 0.22
CDC42SE2-206ENST00000503291 C3orf85A0A1B0GTC6 90 aa16.43■□□□□ 0.22
CDC42SE2-206ENST00000503291 FBP1P09467 338 aa16.43■□□□□ 0.22
CDC42SE2-206ENST00000503291 RAG2P55895 527 aa16.43■□□□□ 0.22
CDC42SE2-206ENST00000503291 SUPT4H1P63272 117 aaKnown RBP16.43■□□□□ 0.22
CDC42SE2-206ENST00000503291 OR2B11Q5JQS5 317 aa16.43■□□□□ 0.22
CDC42SE2-206ENST00000503291 NAA60Q9H7X0 242 aa16.43■□□□□ 0.22
CDC42SE2-206ENST00000503291 H0YJW9 148 aa16.43■□□□□ 0.22
CDC42SE2-206ENST00000503291 OR4E1P0C645 316 aa16.43■□□□□ 0.22
CDC42SE2-206ENST00000503291 BRWD1-AS2P59051 145 aa16.43■□□□□ 0.22
CDC42SE2-206ENST00000503291 PPP1R1AQ13522 171 aa16.43■□□□□ 0.22
CDC42SE2-206ENST00000503291 DEFB112Q30KQ8 113 aa16.43■□□□□ 0.22
CDC42SE2-206ENST00000503291 SP6Q3SY56 376 aa16.43■□□□□ 0.22
CDC42SE2-206ENST00000503291 CFHR4Q92496 578 aa16.43■□□□□ 0.22
CDC42SE2-206ENST00000503291 TP53RKQ96S44 253 aa16.43■□□□□ 0.22
CDC42SE2-206ENST00000503291 KCNIP3Q9Y2W7 256 aa16.43■□□□□ 0.22
CDC42SE2-206ENST00000503291 PRELID3BQ9Y3B1 194 aa16.43■□□□□ 0.22
CDC42SE2-206ENST00000503291 VAMP1P23763 118 aa16.42■□□□□ 0.22
CDC42SE2-206ENST00000503291 RAB13P51153 203 aa16.42■□□□□ 0.22
CDC42SE2-206ENST00000503291 UBE2MP61081 183 aaKnown RBP16.42■□□□□ 0.22
CDC42SE2-206ENST00000503291 C4orf46Q504U0 113 aa16.42■□□□□ 0.22
CDC42SE2-206ENST00000503291 MINDY2Q8NBR6 621 aa16.42■□□□□ 0.22
CDC42SE2-206ENST00000503291 MDFIC2A0A1B0GVS7 189 aa16.41■□□□□ 0.22
CDC42SE2-206ENST00000503291 OR5AC1P0C628 307 aa16.41■□□□□ 0.22
CDC42SE2-206ENST00000503291 ARHGDIBP52566 201 aa16.41■□□□□ 0.22
CDC42SE2-206ENST00000503291 HABP2Q14520 560 aaPredicted RBP16.41■□□□□ 0.22
CDC42SE2-206ENST00000503291 SPAG16Q8N0X2 631 aa16.41■□□□□ 0.22
CDC42SE2-206ENST00000503291 SLC35D1Q9NTN3 355 aa16.41■□□□□ 0.22
CDC42SE2-206ENST00000503291 LIN7CQ9NUP9 197 aaKnown RBP16.41■□□□□ 0.22
CDC42SE2-206ENST00000503291 CDC42EP3Q9UKI2 254 aa16.41■□□□□ 0.22
CDC42SE2-206ENST00000503291 H7C2Y5 167 aa16.41■□□□□ 0.22
CDC42SE2-206ENST00000503291 RAMP3O60896 148 aa16.41■□□□□ 0.22
CDC42SE2-206ENST00000503291 FCGR3BO75015 233 aa16.41■□□□□ 0.22
CDC42SE2-206ENST00000503291 CD24P25063 80 aa16.41■□□□□ 0.22
CDC42SE2-206ENST00000503291 MC5RP33032 325 aa16.41■□□□□ 0.22
CDC42SE2-206ENST00000503291 TAGLNQ01995 201 aaKnown RBP16.41■□□□□ 0.22
CDC42SE2-206ENST00000503291 GALNT14Q96FL9 552 aa16.41■□□□□ 0.22
CDC42SE2-206ENST00000503291 INAFM1C9JVW0 142 aa16.4■□□□□ 0.22
CDC42SE2-206ENST00000503291 H0Y980 276 aa16.4■□□□□ 0.22
CDC42SE2-206ENST00000503291 DHFRP00374 187 aa16.4■□□□□ 0.22
CDC42SE2-206ENST00000503291 APOA2P02652 100 aa16.4■□□□□ 0.22
CDC42SE2-206ENST00000503291 BRS3P32247 399 aa16.4■□□□□ 0.22
CDC42SE2-206ENST00000503291 DHRS2Q13268 280 aa16.4■□□□□ 0.22
CDC42SE2-206ENST00000503291 SLC9A3R2Q15599 337 aa16.4■□□□□ 0.22
CDC42SE2-206ENST00000503291 C11orf88Q6PI97 169 aa16.4■□□□□ 0.22
CDC42SE2-206ENST00000503291 GLYATL2Q8WU03 294 aa16.4■□□□□ 0.22
CDC42SE2-206ENST00000503291 ZFHX3Q15911 3703 aa16.4■□□□□ 0.22
CDC42SE2-206ENST00000503291 C9orf170A2RU37 121 aa16.4■□□□□ 0.22
CDC42SE2-206ENST00000503291 HLA-AP01891 365 aaKnown RBP16.4■□□□□ 0.22
CDC42SE2-206ENST00000503291 IGKV1-16P04430 117 aa16.4■□□□□ 0.22
CDC42SE2-206ENST00000503291 CD1BP29016 333 aa16.4■□□□□ 0.22
CDC42SE2-206ENST00000503291 RTL8BQ17RB0 113 aa16.4■□□□□ 0.22
CDC42SE2-206ENST00000503291 ZNF585BQ52M93 769 aa16.4■□□□□ 0.22
CDC42SE2-206ENST00000503291 OR52B4Q8NGK2 314 aa16.4■□□□□ 0.22
CDC42SE2-206ENST00000503291 WASHC3Q9Y3C0 194 aa16.4■□□□□ 0.22
CDC42SE2-206ENST00000503291 MTORP42345 2549 aa16.39■□□□□ 0.21
CDC42SE2-206ENST00000503291 ANK3Q12955 4377 aaKnown RBP16.39■□□□□ 0.21
CDC42SE2-206ENST00000503291 VGLL3A8MV65 326 aa16.39■□□□□ 0.21
CDC42SE2-206ENST00000503291 VENTXO95231 258 aa16.39■□□□□ 0.21
CDC42SE2-206ENST00000503291 SFT2D2O95562 160 aa16.39■□□□□ 0.21
CDC42SE2-206ENST00000503291 IFNA2P01563 188 aa16.39■□□□□ 0.21
CDC42SE2-206ENST00000503291 LYG2Q86SG7 212 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms