RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 PSG5Q15238 335 aa12.6□□□□□ -0.39
SCLT1-204ENST00000503215 ZNF260Q3ZCT1 412 aa12.6□□□□□ -0.39
SCLT1-204ENST00000503215 C9orf66Q5T8R8 295 aa12.6□□□□□ -0.39
SCLT1-204ENST00000503215 ZNF660Q6AZW8 331 aaPredicted RBP12.6□□□□□ -0.39
SCLT1-204ENST00000503215 OR13F1Q8NGS4 319 aa12.6□□□□□ -0.39
SCLT1-204ENST00000503215 MAFIPQ8WZ33 124 aa12.6□□□□□ -0.39
SCLT1-204ENST00000503215 CHCHD6Q9BRQ6 235 aa12.6□□□□□ -0.39
SCLT1-204ENST00000503215 TPSG1Q9NRR2 321 aa12.6□□□□□ -0.39
SCLT1-204ENST00000503215 RDH8Q9NYR8 311 aa12.6□□□□□ -0.39
SCLT1-204ENST00000503215 NUBP2Q9Y5Y2 271 aa12.6□□□□□ -0.39
SCLT1-204ENST00000503215 A0A1W2PN81 502 aa12.59□□□□□ -0.39
SCLT1-204ENST00000503215 MC5RP33032 325 aa12.59□□□□□ -0.39
SCLT1-204ENST00000503215 CHRNA7P36544 502 aa12.59□□□□□ -0.39
SCLT1-204ENST00000503215 RUNX1Q01196 453 aa12.59□□□□□ -0.39
SCLT1-204ENST00000503215 PLGLAQ15195 96 aa12.59□□□□□ -0.39
SCLT1-204ENST00000503215 TBCEQ15813 527 aaPredicted RBP12.59□□□□□ -0.39
SCLT1-204ENST00000503215 IGSF11Q5DX21 431 aa12.59□□□□□ -0.39
SCLT1-204ENST00000503215 ZNF773Q6PK81 442 aa12.59□□□□□ -0.39
SCLT1-204ENST00000503215 NR2C2APQ86WQ0 139 aa12.59□□□□□ -0.39
SCLT1-204ENST00000503215 OR56B1Q8NGI3 324 aa12.59□□□□□ -0.39
SCLT1-204ENST00000503215 DCUN1D4Q92564 292 aa12.59□□□□□ -0.39
SCLT1-204ENST00000503215 C5orf30Q96GV9 206 aa12.59□□□□□ -0.39
SCLT1-204ENST00000503215 METTL1Q9UBP6 276 aaKnown RBP12.59□□□□□ -0.39
SCLT1-204ENST00000503215 ZNF230Q9UIE0 474 aaPredicted RBP12.59□□□□□ -0.39
SCLT1-204ENST00000503215 RAB22AQ9UL26 194 aa12.59□□□□□ -0.39
SCLT1-204ENST00000503215 LSM4Q9Y4Z0 139 aaKnown RBP12.59□□□□□ -0.39
SCLT1-204ENST00000503215 SMIM30A4D0T7 59 aa12.58□□□□□ -0.4
SCLT1-204ENST00000503215 BOLA2-SMG1P6H3BVE0 249 aa12.58□□□□□ -0.4
SCLT1-204ENST00000503215 GSTT2P0CG29 244 aa12.58□□□□□ -0.4
SCLT1-204ENST00000503215 GSTT2BP0CG30 244 aa12.58□□□□□ -0.4
SCLT1-204ENST00000503215 GNB3P16520 340 aa12.58□□□□□ -0.4
SCLT1-204ENST00000503215 CRIP2P52943 208 aaPredicted RBP12.58□□□□□ -0.4
SCLT1-204ENST00000503215 GABARAPL2P60520 117 aa12.58□□□□□ -0.4
SCLT1-204ENST00000503215 ZNF616Q08AN1 781 aa12.58□□□□□ -0.4
SCLT1-204ENST00000503215 ZNF367Q7RTV3 350 aa12.58□□□□□ -0.4
SCLT1-204ENST00000503215 PPP1R27Q86WC6 154 aa12.58□□□□□ -0.4
SCLT1-204ENST00000503215 ABHD5Q8WTS1 349 aa12.58□□□□□ -0.4
SCLT1-204ENST00000503215 EDARADDQ8WWZ3 215 aa12.58□□□□□ -0.4
SCLT1-204ENST00000503215 RAB3CQ96E17 227 aa12.58□□□□□ -0.4
SCLT1-204ENST00000503215 ELF5Q9UKW6 265 aaPredicted RBP12.58□□□□□ -0.4
SCLT1-204ENST00000503215 FOXA2Q9Y261 457 aaPredicted RBP12.58□□□□□ -0.4
SCLT1-204ENST00000503215 A0A075B6Q4 140 aa12.57□□□□□ -0.4
SCLT1-204ENST00000503215 TRAV1-2A0A0B4J238 106 aa12.57□□□□□ -0.4
SCLT1-204ENST00000503215 IFITM5A6NNB3 132 aa12.57□□□□□ -0.4
SCLT1-204ENST00000503215 M0R1X1 148 aa12.57□□□□□ -0.4
SCLT1-204ENST00000503215 RAB27BO00194 218 aa12.57□□□□□ -0.4
SCLT1-204ENST00000503215 FABP7O15540 132 aa12.57□□□□□ -0.4
SCLT1-204ENST00000503215 RAMP3O60896 148 aa12.57□□□□□ -0.4
SCLT1-204ENST00000503215 SLURP1P55000 103 aa12.57□□□□□ -0.4
SCLT1-204ENST00000503215 OXA1LQ15070 435 aa12.57□□□□□ -0.4
SCLT1-204ENST00000503215 TRIM16LQ309B1 348 aa12.57□□□□□ -0.4
SCLT1-204ENST00000503215 CD200R1LQ6Q8B3 271 aa12.57□□□□□ -0.4
SCLT1-204ENST00000503215 DLX4Q92988 240 aaPredicted RBP12.57□□□□□ -0.4
SCLT1-204ENST00000503215 MS4A10Q96PG2 267 aa12.57□□□□□ -0.4
SCLT1-204ENST00000503215 TOLLIPQ9H0E2 274 aa12.57□□□□□ -0.4
SCLT1-204ENST00000503215 NDUFB11Q9NX14 153 aa12.57□□□□□ -0.4
SCLT1-204ENST00000503215 ZNF221Q9UK13 617 aa12.57□□□□□ -0.4
SCLT1-204ENST00000503215 MGAT4AQ9UM21 535 aa12.57□□□□□ -0.4
SCLT1-204ENST00000503215 IGKV1D-8A0A087WSZ0 117 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 MFNGO00587 321 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 ARPC1BO15143 372 aaKnown RBP12.56□□□□□ -0.4
SCLT1-204ENST00000503215 BET1O15155 118 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 RBBP9O75884 186 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 CA2P00918 260 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 IGHV3-11P01762 117 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 FCGR3AP08637 254 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 OR8U8P0C7N1 319 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 OR8U9P0C7N5 309 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 RPS16P62249 146 aaKnown RBP12.56□□□□□ -0.4
SCLT1-204ENST00000503215 SSBP2P81877 361 aaPredicted RBP12.56□□□□□ -0.4
SCLT1-204ENST00000503215 PJVKQ0ZLH3 352 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 C22orf42Q6IC83 251 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 UNQ5815/PRO19632Q6UWF5 114 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 LFNGQ8NES3 379 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 OR10R2Q8NGX6 335 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 GHITMQ9H3K2 345 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 NBEAL2Q6ZNJ1 2754 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 SORL1Q92673 2214 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 IGHV4OR15-8A0A075B7B6 117 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 A0A087WW49 117 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 TRDV1A0A1B0GX56 115 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 SLC25A17O43808 307 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 IGLV2-23P01705 113 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 ZNF562Q6V9R5 426 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 OR4A4PQ8NGN8 299 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 ASCL2Q99929 193 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 RNF5Q99942 180 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 SDHAF2Q9NX18 166 aa12.56□□□□□ -0.4
SCLT1-204ENST00000503215 PDCD5O14737 125 aa12.55□□□□□ -0.4
SCLT1-204ENST00000503215 HIST1H1DP16402 221 aaKnown RBP12.55□□□□□ -0.4
SCLT1-204ENST00000503215 ACTBL2Q562R1 376 aa12.55□□□□□ -0.4
SCLT1-204ENST00000503215 GPR107Q5VW38 600 aa12.55□□□□□ -0.4
SCLT1-204ENST00000503215 GRPEL2Q8TAA5 225 aa12.55□□□□□ -0.4
SCLT1-204ENST00000503215 TSNAXQ99598 290 aaKnown RBP12.55□□□□□ -0.4
SCLT1-204ENST00000503215 CABLES2Q9BTV7 478 aa12.55□□□□□ -0.4
SCLT1-204ENST00000503215 OR2D2Q9H210 308 aa12.55□□□□□ -0.4
SCLT1-204ENST00000503215 SLC35D1Q9NTN3 355 aa12.55□□□□□ -0.4
SCLT1-204ENST00000503215 ZMAT5Q9UDW3 170 aaKnown RBP12.55□□□□□ -0.4
SCLT1-204ENST00000503215 TENM3Q9P273 2699 aa12.54□□□□□ -0.4
SCLT1-204ENST00000503215 TRBV6-7A0A0A0MS04 114 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms