RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 SSBP1Q04837 148 aaKnown RBP19.95■□□□□ 0.78
LSM6-202ENST00000502781 RNASE12Q5GAN4 147 aaKnown RBP19.95■□□□□ 0.78
LSM6-202ENST00000502781 DDB2Q92466 427 aa19.95■□□□□ 0.78
LSM6-202ENST00000502781 RBMX2Q9Y388 322 aaKnown RBP19.95■□□□□ 0.78
LSM6-202ENST00000502781 FABP12A6NFH5 140 aa19.94■□□□□ 0.78
LSM6-202ENST00000502781 THBS3P49746 956 aa19.94■□□□□ 0.78
LSM6-202ENST00000502781 TAGLNQ01995 201 aaKnown RBP19.94■□□□□ 0.78
LSM6-202ENST00000502781 EIF4EBP1Q13541 118 aaPredicted RBP19.94■□□□□ 0.78
LSM6-202ENST00000502781 C3orf56Q8N813 242 aa19.94■□□□□ 0.78
LSM6-202ENST00000502781 NPBQ8NG41 125 aa19.94■□□□□ 0.78
LSM6-202ENST00000502781 RNF5Q99942 180 aa19.94■□□□□ 0.78
LSM6-202ENST00000502781 LIN7CQ9NUP9 197 aaKnown RBP19.94■□□□□ 0.78
LSM6-202ENST00000502781 ZNF107Q9UII5 783 aaPredicted RBP19.94■□□□□ 0.78
LSM6-202ENST00000502781 A6NHS1 94 aa19.93■□□□□ 0.78
LSM6-202ENST00000502781 SH2D7A6NKC9 451 aaPredicted RBP19.93■□□□□ 0.78
LSM6-202ENST00000502781 NCBP2LA6PVI3 153 aaKnown RBP19.93■□□□□ 0.78
LSM6-202ENST00000502781 ACTBL2Q562R1 376 aa19.93■□□□□ 0.78
LSM6-202ENST00000502781 VAX1Q5SQQ9 334 aa19.93■□□□□ 0.78
LSM6-202ENST00000502781 CCDC190Q86UF4 302 aa19.93■□□□□ 0.78
LSM6-202ENST00000502781 PDPNQ86YL7 162 aa19.93■□□□□ 0.78
LSM6-202ENST00000502781 ADTRPQ96IZ2 230 aa19.93■□□□□ 0.78
LSM6-202ENST00000502781 ANK2Q01484 3957 aa19.92■□□□□ 0.78
LSM6-202ENST00000502781 LINC00473A8K010 186 aa19.92■□□□□ 0.78
LSM6-202ENST00000502781 GSTZ1O43708 216 aaPredicted RBP19.92■□□□□ 0.78
LSM6-202ENST00000502781 NDUFA3O95167 84 aa19.92■□□□□ 0.78
LSM6-202ENST00000502781 APOA2P02652 100 aa19.92■□□□□ 0.78
LSM6-202ENST00000502781 IGKV1-16P04430 117 aa19.92■□□□□ 0.78
LSM6-202ENST00000502781 S100A5P33763 92 aa19.92■□□□□ 0.78
LSM6-202ENST00000502781 MMDQ15546 238 aa19.92■□□□□ 0.78
LSM6-202ENST00000502781 SECTM1Q8WVN6 248 aa19.92■□□□□ 0.78
LSM6-202ENST00000502781 MOB3AQ96BX8 217 aa19.92■□□□□ 0.78
LSM6-202ENST00000502781 ZNF2Q9BSG1 426 aaPredicted RBP19.92■□□□□ 0.78
LSM6-202ENST00000502781 WNT10AQ9GZT5 417 aa19.92■□□□□ 0.78
LSM6-202ENST00000502781 CCL28Q9NRJ3 127 aa19.92■□□□□ 0.78
LSM6-202ENST00000502781 V9GYH0 126 aa19.92■□□□□ 0.78
LSM6-202ENST00000502781 H7C2Y5 167 aa19.91■□□□□ 0.78
LSM6-202ENST00000502781 CD74P04233 296 aa19.91■□□□□ 0.78
LSM6-202ENST00000502781 TBPP20226 339 aa19.91■□□□□ 0.78
LSM6-202ENST00000502781 CNTFRP26992 372 aa19.91■□□□□ 0.78
LSM6-202ENST00000502781 KRTAP10-3P60369 221 aa19.91■□□□□ 0.78
LSM6-202ENST00000502781 TMEM229BQ8NBD8 167 aa19.91■□□□□ 0.78
LSM6-202ENST00000502781 OR6F1Q8NGZ6 308 aa19.91■□□□□ 0.78
LSM6-202ENST00000502781 WIPF2Q8TF74 440 aaPredicted RBP19.91■□□□□ 0.78
LSM6-202ENST00000502781 SLC35D1Q9NTN3 355 aa19.91■□□□□ 0.78
LSM6-202ENST00000502781 NBR2O15453 112 aa19.9■□□□□ 0.78
LSM6-202ENST00000502781 IGHG2P01859 326 aa19.9■□□□□ 0.78
LSM6-202ENST00000502781 CD3DP04234 171 aa19.9■□□□□ 0.78
LSM6-202ENST00000502781 ETV6P41212 452 aa19.9■□□□□ 0.78
LSM6-202ENST00000502781 TMEM95Q3KNT9 176 aa19.9■□□□□ 0.78
LSM6-202ENST00000502781 ZBTB34Q8NCN2 500 aa19.9■□□□□ 0.78
LSM6-202ENST00000502781 OR6Q1Q8NGQ2 317 aa19.9■□□□□ 0.78
LSM6-202ENST00000502781 SLC5A7Q9GZV3 580 aa19.9■□□□□ 0.78
LSM6-202ENST00000502781 VDAC2P45880 294 aaPredicted RBP19.89■□□□□ 0.77
LSM6-202ENST00000502781 FXYD4P59646 89 aa19.89■□□□□ 0.77
LSM6-202ENST00000502781 HERV-K104P61576 105 aa19.89■□□□□ 0.77
LSM6-202ENST00000502781 RPL30P62888 115 aaKnown RBP19.89■□□□□ 0.77
LSM6-202ENST00000502781 HSD17B10Q99714 261 aaKnown RBP19.89■□□□□ 0.77
LSM6-202ENST00000502781 M0QYG6 137 aa19.88■□□□□ 0.77
LSM6-202ENST00000502781 HAX1O00165 279 aa19.88■□□□□ 0.77
LSM6-202ENST00000502781 RRASP10301 218 aa19.88■□□□□ 0.77
LSM6-202ENST00000502781 PTBP1P26599 531 aaKnown RBP eCLIP19.88■□□□□ 0.77
LSM6-202ENST00000502781 TAS2R19P59542 299 aa19.88■□□□□ 0.77
LSM6-202ENST00000502781 C5orf64Q2M2E5 130 aa19.88■□□□□ 0.77
LSM6-202ENST00000502781 SHISA2Q6UWI4 295 aa19.88■□□□□ 0.77
LSM6-202ENST00000502781 ZNF66Q6ZN08 573 aa19.88■□□□□ 0.77
LSM6-202ENST00000502781 KLHDC1Q8N7A1 406 aa19.88■□□□□ 0.77
LSM6-202ENST00000502781 FLYWCH2Q96CP2 140 aaKnown RBP19.88■□□□□ 0.77
LSM6-202ENST00000502781 CITED1Q99966 193 aa19.88■□□□□ 0.77
LSM6-202ENST00000502781 RASL11BQ9BPW5 248 aa19.88■□□□□ 0.77
LSM6-202ENST00000502781 TINAGL1Q9GZM7 467 aaPredicted RBP19.88■□□□□ 0.77
LSM6-202ENST00000502781 FXYD6Q9H0Q3 95 aa19.88■□□□□ 0.77
LSM6-202ENST00000502781 GNRHRP30968 328 aa19.87■□□□□ 0.77
LSM6-202ENST00000502781 TSPAN5P62079 268 aa19.87■□□□□ 0.77
LSM6-202ENST00000502781 ZNF79Q15937 498 aa19.87■□□□□ 0.77
LSM6-202ENST00000502781 RTL8BQ17RB0 113 aa19.87■□□□□ 0.77
LSM6-202ENST00000502781 TMEM177Q53S58 311 aa19.87■□□□□ 0.77
LSM6-202ENST00000502781 RNASE10Q5GAN6 216 aaKnown RBP19.87■□□□□ 0.77
LSM6-202ENST00000502781 C9orf152Q5JTZ5 239 aa19.87■□□□□ 0.77
LSM6-202ENST00000502781 ZNF818PQ6ZRF7 136 aa19.87■□□□□ 0.77
LSM6-202ENST00000502781 KCTD9Q7L273 389 aa19.87■□□□□ 0.77
LSM6-202ENST00000502781 TMEM17Q86X19 198 aa19.87■□□□□ 0.77
LSM6-202ENST00000502781 ARRDC1Q8N5I2 433 aa19.87■□□□□ 0.77
LSM6-202ENST00000502781 BVESQ8NE79 360 aa19.87■□□□□ 0.77
LSM6-202ENST00000502781 RRHO14718 337 aa19.86■□□□□ 0.77
LSM6-202ENST00000502781 RPS16P62249 146 aaKnown RBP19.86■□□□□ 0.77
LSM6-202ENST00000502781 SRSF4Q08170 494 aaKnown RBP19.86■□□□□ 0.77
LSM6-202ENST00000502781 MFSD4AQ8N468 514 aa19.86■□□□□ 0.77
LSM6-202ENST00000502781 BORCS5Q969J3 196 aa19.86■□□□□ 0.77
LSM6-202ENST00000502781 SPDEFO95238 335 aa19.85■□□□□ 0.77
LSM6-202ENST00000502781 IGLV2-23P01705 113 aa19.85■□□□□ 0.77
LSM6-202ENST00000502781 HLA-DRB1P01911 266 aa19.85■□□□□ 0.77
LSM6-202ENST00000502781 CSF1P09603 554 aa19.85■□□□□ 0.77
LSM6-202ENST00000502781 LGALS7P47929 136 aa19.85■□□□□ 0.77
LSM6-202ENST00000502781 BRWD1-AS2P59051 145 aa19.85■□□□□ 0.77
LSM6-202ENST00000502781 PSG5Q15238 335 aa19.85■□□□□ 0.77
LSM6-202ENST00000502781 ARSJQ5FYB0 599 aaPredicted RBP19.85■□□□□ 0.77
LSM6-202ENST00000502781 AADACL3Q5VUY0 350 aa19.85■□□□□ 0.77
LSM6-202ENST00000502781 STEAP1BQ6NZ63 245 aa19.85■□□□□ 0.77
LSM6-202ENST00000502781 SLC35E3Q7Z769 313 aa19.85■□□□□ 0.77
LSM6-202ENST00000502781 LHFPL1Q86WI0 220 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms