RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 A0A1W2PNU3 283 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 DHRS12A0PJE2 317 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 ZNF780AO75290 641 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 SNAPINO95295 136 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 HAND1O96004 215 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 MOSP00540 346 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 THY1P04216 161 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 SPNP16150 400 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 ATF1P18846 271 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 CXCL2P19875 107 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 RAB3BP20337 219 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 ELK4P28324 431 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 RCVRNP35243 200 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 LGALS7P47929 136 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 FOXA1P55317 472 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 RPL38P63173 70 aaKnown RBP3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 SELENOWP63302 87 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 QPRTQ15274 297 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 IRF4Q15306 451 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 HIST3H3Q16695 136 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 ZNF876PQ49A33 203 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 LIN52Q52LA3 116 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 TMEM236Q5W0B7 351 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 RFLNAQ6ZTI6 216 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 SLC36A1Q7Z2H8 476 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 DEFB119Q8N690 84 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 Q8N9P0 234 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 NKAPP1Q8N9T2 125 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 ZNF485Q8NCK3 441 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 OR10A6Q8NH74 314 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 OR10G6Q8NH81 332 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 OR10J5Q8NHC4 309 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 VN1R17PQ8TDU5 208 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 KLK6Q92876 244 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 CCDC115Q96NT0 180 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 SIGLEC12Q96PQ1 595 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 DOHHQ9BU89 302 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 POLR2J2Q9GZM3 115 aaKnown RBP3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 POLR2J3Q9H1A7 115 aaKnown RBP3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 DEFB127Q9H1M4 99 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 TXNIPQ9H3M7 391 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 TPT1P8Q9HAU6 139 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 CMTM6Q9NX76 183 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 DPM3Q9P2X0 92 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 SLC23A2Q9UGH3 650 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 PRELID3BQ9Y3B1 194 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 LSM5Q9Y4Y9 91 aaKnown RBP3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 USP9XQ93008 2570 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 TRPM6Q9BX84 2022 aa3.26□□□□□ -1.89
HMGB1P21-201ENST00000502313 LRP4O75096 1905 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 ADAMTS9Q9P2N4 1935 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 PCSK5Q92824 1860 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 A0A087WUJ7 227 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 IGKV1-8A0A0C4DH67 115 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 TCRBV3S1A0A5B6 114 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 ZNF729A6NN14 1252 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 C8orf87E5RJ46 101 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 E7EQ34 232 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 TCAPO15273 167 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 IGLV2-11P01706 119 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 NBEAP1P0C6P0 100 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 PATE4P0C8F1 98 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 ESDP10768 282 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 CD1EP15812 388 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 CD36P16671 472 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 ZNF708P17019 499 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 MYL12AP19105 171 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 HIST1H1TP22492 207 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 CXCR1P25024 350 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 CTRLP40313 264 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 SSR2P43308 183 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 CDK9P50750 372 aaKnown RBP3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 P2RX1P51575 399 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 ZNF138P52744 262 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 TAS2R19P59542 299 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 TBPL1P62380 186 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 SLC35A2P78381 396 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 BTN3A2P78410 334 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 PSG4Q00888 419 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 MS4A2Q01362 244 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 EDDM3AQ14507 147 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 SMCO1Q147U7 214 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 TGIF1Q15583 401 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 ARHGAP11BQ3KRB8 267 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 TMEM97Q5BJF2 176 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 TMEM255AQ5JRV8 349 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 AVPI1Q5T686 147 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 HIST2H3PS2Q5TEC6 136 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 LCN8Q6JVE9 175 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 PLET1Q6UQ28 207 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 UGT2A3Q6UWM9 527 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 RPS27LQ71UM5 84 aaKnown RBP3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 COMMD6Q7Z4G1 85 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 C6orf120Q7Z4R8 191 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 SMIM20Q8N5G0 67 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 ZNF676Q8N7Q3 588 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 COX18Q8N8Q8 333 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 Q8NBF4 154 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 OR4P4Q8NGL7 312 aa3.25□□□□□ -1.89
HMGB1P21-201ENST00000502313 OR1L8Q8NGR8 309 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms