RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 PACRGLQ8N7B6 248 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 KLHL30-AS1Q8NEE0 82 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 OR51L1Q8NGJ5 315 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 OR5D14Q8NGL3 314 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 OR8J1Q8NGP2 316 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 OR2K2Q8NGT1 345 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 ZNRF4Q8WWF5 429 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 TMEM190Q8WZ59 177 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 THRSPQ92748 146 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 SEH1LQ96EE3 360 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 CNBD2Q96M20 576 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 FEVQ99581 238 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 NIPSNAP1Q9BPW8 284 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 ANKRD60Q9BZ19 345 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 FGF23Q9GZV9 251 aaPredicted RBP2.97□□□□□ -1.93
USP54-217ENST00000498213 SLA2Q9H6Q3 261 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 RETNQ9HD89 108 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 SMPD3Q9NY59 655 aaPredicted RBP2.97□□□□□ -1.93
USP54-217ENST00000498213 IL36GQ9NZH8 169 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 MTCH1Q9NZJ7 389 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 DNAJC27Q9NZQ0 273 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 AASSQ9UDR5 926 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 IKZF2Q9UKS7 526 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 RAB26Q9ULW5 256 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 VSIG4Q9Y279 399 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 HILPDAQ9Y5L2 63 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 A0A0G2JLM5 398 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 A0A1B0GTI1 187 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 METTL15A6NJ78 407 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 FAM183AA6NL82 134 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 TRIM64CA6NLI5 447 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 M0R129 80 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 GNGT2O14610 69 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 ITGB1BP1O14713 200 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 HSD17B6O14756 317 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 LANCL1O43813 399 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 AIREO43918 545 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 RBBP9O75884 186 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 OR2H2O95918 312 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 TSHBP01222 138 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 HLA-DRB1P01911 266 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 GYPBP06028 91 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 CD2P06729 351 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 CLUP10909 449 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 PSKH1P11801 424 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 ATF1P18846 271 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 ZP3P21754 424 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 HTR1FP30939 366 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 MC5RP33032 325 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 SOX6P35712 828 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 RAB13P51153 203 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 CRISP1P54107 249 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 DLX1P56177 255 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 CXCR4P61073 352 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 MFGE8Q08431 387 aaPredicted RBP2.96□□□□□ -1.94
USP54-217ENST00000498213 ZNF616Q08AN1 781 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 TATDN3Q17R31 274 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 CCDC58Q4VC31 144 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 KRBOX4Q5JUW0 171 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 FFAR4Q5NUL3 377 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 LDLRAD2Q5SZI1 272 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 AADACL4Q5VUY2 407 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 ZNF660Q6AZW8 331 aaPredicted RBP2.96□□□□□ -1.94
USP54-217ENST00000498213 CD200R1LQ6Q8B3 271 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 C10orf99Q6UWK7 81 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 ASCL4Q6XD76 172 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 CATSPERDQ86XM0 798 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 SERPINA12Q8IW75 414 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 SGPP2Q8IWX5 399 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 RDH10Q8IZV5 341 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 SYS1Q8N2H4 156 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 FGFRL1Q8N441 504 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 OR10X1Q8NGY0 326 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 APH1BQ8WW43 257 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 CYGBQ8WWM9 190 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 TMEM106AQ96A25 262 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 NOL4LQ96MY1 436 aaPredicted RBP2.96□□□□□ -1.94
USP54-217ENST00000498213 OPALINQ96PE5 141 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 AMELYQ99218 206 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 OPRPNQ99935 248 aaPredicted RBP2.96□□□□□ -1.94
USP54-217ENST00000498213 RASL11BQ9BPW5 248 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 NABP2Q9BQ15 211 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 SULT4A1Q9BR01 284 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 GABARAPL3Q9BY60 117 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 VCX3BQ9H321 246 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 ELL3Q9HB65 397 aaPredicted RBP2.96□□□□□ -1.94
USP54-217ENST00000498213 ADGRL4Q9HBW9 690 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 IDI2-AS1Q9NZ38 188 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 N6AMT1Q9Y5N5 214 aa2.96□□□□□ -1.94
USP54-217ENST00000498213 IGHV1-3A0A0C4DH29 117 aa2.95□□□□□ -1.94
USP54-217ENST00000498213 FAM230AA0A1W2PPH8 454 aa2.95□□□□□ -1.94
USP54-217ENST00000498213 TMEM30CPA0ZSE6 113 aa2.95□□□□□ -1.94
USP54-217ENST00000498213 NDUFAF8A1L188 74 aa2.95□□□□□ -1.94
USP54-217ENST00000498213 TMEM212A6NML5 194 aa2.95□□□□□ -1.94
USP54-217ENST00000498213 I3L521 148 aa2.95□□□□□ -1.94
USP54-217ENST00000498213 SLC33A1O00400 549 aaPredicted RBP2.95□□□□□ -1.94
USP54-217ENST00000498213 OVOL1O14753 267 aa2.95□□□□□ -1.94
USP54-217ENST00000498213 DEGS1O15121 323 aa2.95□□□□□ -1.94
USP54-217ENST00000498213 OGG1O15527 345 aa2.95□□□□□ -1.94
USP54-217ENST00000498213 XRCC3O43542 346 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms