RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 ZNF56Q15929 161 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 RFTN2Q52LD8 501 aaPredicted RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 C1orf146Q5VVC0 180 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 METRNLQ641Q3 311 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 LCN8Q6JVE9 175 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 CCDC144NLQ6NUI1 221 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 AGTRAPQ6RW13 159 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 ARL9Q6T311 187 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 Q6ZPB1 254 aaPredicted RBP1.13□□□□□ -2.23
XRN1-214ENST00000498077 Q6ZSV7 163 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 CAMK2N1Q7Z7J9 78 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 ZNF101Q8IZC7 436 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 STPG2Q8N412 459 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 CELF2-AS1Q8N7Q2 184 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 CATSPER1Q8NEC5 780 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 OR10J5Q8NHC4 309 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 AGR3Q8TD06 166 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 DEFB129Q9H1M3 183 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 GLTPQ9NZD2 209 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 FOXJ3Q9UPW0 622 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 KALRNO60229 2985 aa1.13□□□□□ -2.23
XRN1-214ENST00000498077 TCRBV9S1A1TA0A576 114 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 ASPDHA6ND91 283 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 FAM86B1E9PN63 330 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 H0YAE9 185 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 H7C0C1 242 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 PDLIM1O00151 329 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 LGALS9O00182 355 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 SH2D1BO14796 132 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 CYB5BO43169 146 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 GOSR1O95249 250 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 IFNGP01579 166 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 AMBPP02760 352 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 RHOCP08134 193 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 FAM86B2P0C5J1 330 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 ZNF708P17019 499 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 MYL9P24844 172 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 CXCL12P48061 93 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 HERV-K104P63124 156 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 CTAG1AP78358 180 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 TMEM52BQ4KMG9 183 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 KRBOX4Q5JUW0 171 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 SUSD4Q5VX71 490 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 LAIR2Q6ISS4 152 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 DPPA4Q7L190 304 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 COMTD1Q86VU5 262 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 CCDC60Q8IWA6 550 aaPredicted RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 COX18Q8N8Q8 333 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 OR5AP2Q8NGF4 316 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 THEM6Q8WUY1 208 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 EXOSC8Q96B26 276 aaKnown RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 ISOC1Q96CN7 298 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 OR8B2Q96RD0 313 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 IL4I1Q96RQ9 567 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 LY9Q9HBG7 655 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 FBXL4Q9UKA2 621 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 CFAP20Q9Y6A4 193 aaKnown RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 KIF16BQ96L93 1317 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 TANC1Q9C0D5 1861 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 IGLV4-69A0A075B6H9 119 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 IGLV2-18A0A075B6J9 118 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 ZNF727A8MUV8 499 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 AKR7A2O43488 359 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 CST4P01036 141 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 IGF1P05019 195 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 SLC35E2BP0CK96 405 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 PTNP21246 168 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 ATP6V0CP27449 155 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 RPS13P62277 151 aaKnown RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 RPL8P62917 257 aaKnown RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 PSG4Q00888 419 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 ISXQ2M1V0 245 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 PRR30Q53SZ7 412 aaPredicted RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 ATAT1Q5SQI0 421 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 MFSD14BQ5SR56 506 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 FAM74A4Q5TZK3 123 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 FAM180BQ6P0A1 224 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 COX6B2Q6YFQ2 88 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 OR6V1Q8N148 313 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 TMEM254Q8TBM7 123 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 KLK6Q92876 244 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 TMEM203Q969S6 136 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 PERPQ96FX8 193 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 SLC41A2Q96JW4 573 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 PKNOX2Q96KN3 472 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 PGLYRP4Q96LB8 373 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 SCGB3A1Q96QR1 104 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 TMEM47Q9BQJ4 181 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 SRXN1Q9BYN0 137 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 FGF23Q9GZV9 251 aaPredicted RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 DEPPQ9NTK1 212 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 RABL2AQ9UBK7 228 aaPredicted RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 PISDQ9UG56 409 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 FBN1P35555 2871 aaKnown RBP1.12□□□□□ -2.23
XRN1-214ENST00000498077 KIAA1671Q9BY89 1806 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 CSMD1Q96PZ7 3565 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 TRBV5-5A0A0J9YX44 114 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 LOC102725191A0A1B0GVB3 256 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 A6NCN8 305 aa1.12□□□□□ -2.23
XRN1-214ENST00000498077 C15orf61A6NNL5 157 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms