RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 DUTP33316 252 aaKnown RBP10.92□□□□□ -0.66
CPNE1-227ENST00000498056 RAB13P51153 203 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 PIGPP57054 158 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 LINC00205P59089 165 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 DCTN2Q13561 401 aaKnown RBP10.92□□□□□ -0.66
CPNE1-227ENST00000498056 SURF2Q15527 256 aaPredicted RBP10.92□□□□□ -0.66
CPNE1-227ENST00000498056 LY6EQ16553 131 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 CCDC71LQ8N9Z2 235 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 ZNF383Q8NA42 475 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 ZBTB34Q8NCN2 500 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 BVESQ8NE79 360 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 ZFAND1Q8TCF1 268 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 CAPSLQ8WWF8 208 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 RBMXL1Q96E39 390 aaKnown RBP10.92□□□□□ -0.66
CPNE1-227ENST00000498056 ZNF486Q96H40 463 aaPredicted RBP10.92□□□□□ -0.66
CPNE1-227ENST00000498056 ADTRPQ96IZ2 230 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 DUX5Q96PT3 197 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 HSD17B10Q99714 261 aaKnown RBP10.92□□□□□ -0.66
CPNE1-227ENST00000498056 MEGF9Q9H1U4 602 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 PALMDQ9NP74 551 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 SLC35D1Q9NTN3 355 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 LIN7CQ9NUP9 197 aaKnown RBP10.92□□□□□ -0.66
CPNE1-227ENST00000498056 WASHC3Q9Y3C0 194 aa10.92□□□□□ -0.66
CPNE1-227ENST00000498056 MXRA5Q9NR99 2828 aa10.91□□□□□ -0.66
CPNE1-227ENST00000498056 FAM240BA0A1B0GVZ2 78 aa10.91□□□□□ -0.66
CPNE1-227ENST00000498056 DNAJC9-AS1A6NH13 148 aa10.91□□□□□ -0.66
CPNE1-227ENST00000498056 RNF212BA8MTL3 300 aa10.91□□□□□ -0.66
CPNE1-227ENST00000498056 H0YJW9 148 aa10.91□□□□□ -0.66
CPNE1-227ENST00000498056 ARPC1BO15143 372 aaKnown RBP10.91□□□□□ -0.66
CPNE1-227ENST00000498056 FCGR3BO75015 233 aa10.91□□□□□ -0.66
CPNE1-227ENST00000498056 NDUFB6O95139 128 aa10.91□□□□□ -0.66
CPNE1-227ENST00000498056 VENTXO95231 258 aa10.91□□□□□ -0.66
CPNE1-227ENST00000498056 RPL30P62888 115 aaKnown RBP10.91□□□□□ -0.66
CPNE1-227ENST00000498056 CBX3Q13185 183 aa10.91□□□□□ -0.66
CPNE1-227ENST00000498056 RTL8BQ17RB0 113 aa10.91□□□□□ -0.66
CPNE1-227ENST00000498056 Q6YL49 198 aa10.91□□□□□ -0.66
CPNE1-227ENST00000498056 ZNF66Q6ZN08 573 aa10.91□□□□□ -0.66
CPNE1-227ENST00000498056 TBC1D26Q86UD7 250 aa10.91□□□□□ -0.66
CPNE1-227ENST00000498056 ZDHHC22Q8N966 263 aa10.91□□□□□ -0.66
CPNE1-227ENST00000498056 SSMEM1Q8WWF3 244 aa10.91□□□□□ -0.66
CPNE1-227ENST00000498056 SCGB3A2Q96PL1 93 aa10.91□□□□□ -0.66
CPNE1-227ENST00000498056 SLC25A21Q9BQT8 299 aaPredicted RBP10.91□□□□□ -0.66
CPNE1-227ENST00000498056 C20orf85Q9H1P6 137 aa10.91□□□□□ -0.66
CPNE1-227ENST00000498056 GAB2Q9UQC2 676 aa10.91□□□□□ -0.66
CPNE1-227ENST00000498056 PRELID3BQ9Y3B1 194 aa10.91□□□□□ -0.66
CPNE1-227ENST00000498056 VGLL3A8MV65 326 aa10.9□□□□□ -0.66
CPNE1-227ENST00000498056 TMEM11P17152 192 aa10.9□□□□□ -0.66
CPNE1-227ENST00000498056 SLC6A1P30531 599 aa10.9□□□□□ -0.66
CPNE1-227ENST00000498056 EIF4EBP1Q13541 118 aaPredicted RBP10.9□□□□□ -0.66
CPNE1-227ENST00000498056 FBLN7Q53RD9 439 aa10.9□□□□□ -0.66
CPNE1-227ENST00000498056 TMEM219Q86XT9 240 aa10.9□□□□□ -0.66
CPNE1-227ENST00000498056 PDPNQ86YL7 162 aa10.9□□□□□ -0.66
CPNE1-227ENST00000498056 CENPSQ8N2Z9 138 aa10.9□□□□□ -0.66
CPNE1-227ENST00000498056 OR5R1Q8NH85 324 aa10.9□□□□□ -0.66
CPNE1-227ENST00000498056 C5orf66Q9H5L9 145 aa10.9□□□□□ -0.66
CPNE1-227ENST00000498056 NUDT15Q9NV35 164 aa10.9□□□□□ -0.66
CPNE1-227ENST00000498056 TCF19Q9Y242 345 aa10.9□□□□□ -0.66
CPNE1-227ENST00000498056 TRAV6A0A075B6T7 132 aa10.89□□□□□ -0.67
CPNE1-227ENST00000498056 TEX13DA0A0J9YY54 714 aaPredicted RBP10.89□□□□□ -0.67
CPNE1-227ENST00000498056 PEX14O75381 377 aa10.89□□□□□ -0.67
CPNE1-227ENST00000498056 PGLYRP1O75594 196 aaPredicted RBP10.89□□□□□ -0.67
CPNE1-227ENST00000498056 CRYZL1O95825 349 aa10.89□□□□□ -0.67
CPNE1-227ENST00000498056 TCRBP04435 133 aa10.89□□□□□ -0.67
CPNE1-227ENST00000498056 FAM106CPP0CH98 169 aa10.89□□□□□ -0.67
CPNE1-227ENST00000498056 AKR1C4P17516 323 aa10.89□□□□□ -0.67
CPNE1-227ENST00000498056 IER3P46695 156 aa10.89□□□□□ -0.67
CPNE1-227ENST00000498056 DYNLT3P51808 116 aa10.89□□□□□ -0.67
CPNE1-227ENST00000498056 RND3P61587 244 aa10.89□□□□□ -0.67
CPNE1-227ENST00000498056 HABP2Q14520 560 aaPredicted RBP10.89□□□□□ -0.67
CPNE1-227ENST00000498056 HNF4GQ14541 408 aa10.89□□□□□ -0.67
CPNE1-227ENST00000498056 AANATQ16613 207 aa10.89□□□□□ -0.67
CPNE1-227ENST00000498056 SPAG16Q8N0X2 631 aa10.89□□□□□ -0.67
CPNE1-227ENST00000498056 ADAD2Q8NCV1 583 aaKnown RBP10.89□□□□□ -0.67
CPNE1-227ENST00000498056 OR5AN1Q8NGI8 311 aa10.89□□□□□ -0.67
CPNE1-227ENST00000498056 OR4S2Q8NH73 311 aa10.89□□□□□ -0.67
CPNE1-227ENST00000498056 DDB2Q92466 427 aa10.89□□□□□ -0.67
CPNE1-227ENST00000498056 HARBI1Q96MB7 349 aa10.89□□□□□ -0.67
CPNE1-227ENST00000498056 RTBDNQ9BSG5 229 aaPredicted RBP10.89□□□□□ -0.67
CPNE1-227ENST00000498056 VPREB3Q9UKI3 123 aa10.89□□□□□ -0.67
CPNE1-227ENST00000498056 GPR132Q9UNW8 380 aa10.89□□□□□ -0.67
CPNE1-227ENST00000498056 FLVCR2Q9UPI3 526 aa10.89□□□□□ -0.67
CPNE1-227ENST00000498056 MOSP00540 346 aa10.88□□□□□ -0.67
CPNE1-227ENST00000498056 IGKV1-16P04430 117 aa10.88□□□□□ -0.67
CPNE1-227ENST00000498056 F2RP25116 425 aa10.88□□□□□ -0.67
CPNE1-227ENST00000498056 CD1BP29016 333 aa10.88□□□□□ -0.67
CPNE1-227ENST00000498056 MC5RP33032 325 aa10.88□□□□□ -0.67
CPNE1-227ENST00000498056 KIR2DS2P43631 304 aa10.88□□□□□ -0.67
CPNE1-227ENST00000498056 TAS2R31P59538 309 aa10.88□□□□□ -0.67
CPNE1-227ENST00000498056 MMDQ15546 238 aa10.88□□□□□ -0.67
CPNE1-227ENST00000498056 TET2Q6N021 2002 aaPredicted RBP10.88□□□□□ -0.67
CPNE1-227ENST00000498056 NRARPQ7Z6K4 114 aa10.88□□□□□ -0.67
CPNE1-227ENST00000498056 OR2T10Q8NGZ9 312 aa10.88□□□□□ -0.67
CPNE1-227ENST00000498056 TMEM230Q96A57 120 aa10.88□□□□□ -0.67
CPNE1-227ENST00000498056 PRDM13Q9H4Q3 707 aa10.88□□□□□ -0.67
CPNE1-227ENST00000498056 NAA60Q9H7X0 242 aa10.88□□□□□ -0.67
CPNE1-227ENST00000498056 BEX1Q9HBH7 125 aa10.88□□□□□ -0.67
CPNE1-227ENST00000498056 PITPNC1Q9UKF7 332 aa10.88□□□□□ -0.67
CPNE1-227ENST00000498056 CUBNO60494 3623 aa10.87□□□□□ -0.67
CPNE1-227ENST00000498056 C3orf85A0A1B0GTC6 90 aa10.87□□□□□ -0.67
CPNE1-227ENST00000498056 CRYM-AS1A6NIL9 109 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms