RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 RPL12P30050 165 aaKnown RBP6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 DUTP33316 252 aaKnown RBP6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 G6PCP35575 357 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 P2RY1P47900 373 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 THBS3P49746 956 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 ERVK-16P61578 105 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 POLR2GP62487 172 aaKnown RBP eCLIP6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 TMEM155Q4W5P6 130 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 HEPN1Q6WQI6 88 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 ZNF843Q8N446 348 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 OR4S2Q8NH73 311 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 STOML3Q8TAV4 291 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 SCARB1Q8WTV0 552 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 RAB1CQ92928 201 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 GPR146Q96CH1 333 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 ADTRPQ96IZ2 230 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 MAGT1Q9H0U3 335 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 CHODLQ9H9P2 273 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 FBXL17Q9UF56 701 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 MIOXQ9UGB7 285 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 PRELID3BQ9Y3B1 194 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 MMP24Q9Y5R2 645 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 CFAP46Q8IYW2 2715 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 RELNP78509 3460 aa6.64□□□□□ -1.35
PDZRN3-212ENST00000498048 A0A1W2PPH5 198 aa6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 RPS10-NUDT3A0A1W2PQS6 291 aa6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 MARCH11A6NNE9 402 aa6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 RBFOX2O43251 390 aaKnown RBP eCLIP6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 RNF224P0DH78 156 aa6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 GPR6P46095 362 aaPredicted RBP6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 CAV2P51636 162 aa6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 RAB14P61106 215 aa6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 IZUMO4Q1ZYL8 232 aa6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 CT45A1Q5HYN5 189 aa6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 UTF1Q5T230 341 aa6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 TMEM200BQ69YZ2 307 aa6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 SLC25A48Q6ZT89 311 aaKnown RBP6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 DMBX1Q8NFW5 382 aa6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 CT45A3Q8NHU0 189 aa6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 CD300LFQ8TDQ1 290 aa6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 R3HDM4Q96D70 268 aa6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 S1PR3Q99500 378 aa6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 SMIM3Q9BZL3 60 aa6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 NARFLQ9H6Q4 476 aa6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 RALYQ9UKM9 306 aaKnown RBP6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 KLF2Q9Y5W3 355 aaPredicted RBP6.63□□□□□ -1.35
PDZRN3-212ENST00000498048 ZFYVE26Q68DK2 2539 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 AKAP6Q13023 2319 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 IGSF23A1L1A6 192 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 FAM90A26D6RGX4 464 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 TAAR5O14804 337 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 PITX3O75364 302 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 HPRT1P00492 218 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 KRASP01116 189 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 APOA2P02652 100 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 P0C879 139 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 IAPPP10997 89 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 MMP9P14780 707 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 IL3RAP26951 378 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 ZNF134P52741 427 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 DLX6P56179 175 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 GNB2P62879 340 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 EIF5AP63241 154 aaKnown RBP6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 EWSR1Q01844 656 aaKnown RBP eCLIP6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 TLE4Q04727 773 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 RTL8BQ17RB0 113 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 CXorf66Q5JRM2 361 aaPredicted RBP6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 CLLU1Q5K131 121 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 WDR25Q64LD2 544 aaPredicted RBP6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 NCR3LG1Q68D85 454 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 FAM71F2Q6NXP2 309 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 H2BFWTQ7Z2G1 175 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 ODF3L1Q8IXM7 274 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 SLC7A5P1Q8MH63 180 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 OR2C3Q8N628 320 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 OR10X1Q8NGY0 326 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 PCNPQ8WW12 178 aaKnown RBP6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 PHYHIPLQ96FC7 376 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 CCL19Q99731 98 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 SLC25A31Q9H0C2 315 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 C11orf1Q9H5F2 150 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 LYRM2Q9NU23 88 aaPredicted RBP6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 COA4Q9NYJ1 87 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 ZNRD1Q9P1U0 126 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 ONECUT1Q9UBC0 465 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 GAB2Q9UQC2 676 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 SESN1Q9Y6P5 492 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 TNCP24821 2201 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 LRBAP50851 2863 aa6.62□□□□□ -1.35
PDZRN3-212ENST00000498048 NAV3Q8IVL0 2385 aa6.61□□□□□ -1.35
PDZRN3-212ENST00000498048 CR1P17927 2039 aa6.61□□□□□ -1.35
PDZRN3-212ENST00000498048 BORCS7-ASMTA0A0B4J1R7 106 aa6.61□□□□□ -1.35
PDZRN3-212ENST00000498048 H3BP45 60 aa6.61□□□□□ -1.35
PDZRN3-212ENST00000498048 TOR1AO14656 332 aa6.61□□□□□ -1.35
PDZRN3-212ENST00000498048 RBMXL2O75526 392 aaKnown RBP6.61□□□□□ -1.35
PDZRN3-212ENST00000498048 MED6O75586 246 aa6.61□□□□□ -1.35
PDZRN3-212ENST00000498048 CRYZL1O95825 349 aa6.61□□□□□ -1.35
PDZRN3-212ENST00000498048 RBP4P02753 201 aa6.61□□□□□ -1.35
PDZRN3-212ENST00000498048 GAPDHP04406 335 aaKnown RBP6.61□□□□□ -1.35
PDZRN3-212ENST00000498048 IGHV1-8P0DP01 117 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms