RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 CCL3P10147 92 aa1.13□□□□□ -2.23
PSPC1-205ENST00000497722 CCR2P41597 374 aa1.13□□□□□ -2.23
PSPC1-205ENST00000497722 RPL27AP46776 148 aaKnown RBP1.13□□□□□ -2.23
PSPC1-205ENST00000497722 GABRA2P47869 451 aa1.13□□□□□ -2.23
PSPC1-205ENST00000497722 AP1S1P61966 158 aa1.13□□□□□ -2.23
PSPC1-205ENST00000497722 HPCAP84074 193 aa1.13□□□□□ -2.23
PSPC1-205ENST00000497722 TMEM267Q0VDI3 215 aaPredicted RBP1.13□□□□□ -2.23
PSPC1-205ENST00000497722 GNA13Q14344 377 aa1.13□□□□□ -2.23
PSPC1-205ENST00000497722 HLA-DRB5Q30154 266 aa1.13□□□□□ -2.23
PSPC1-205ENST00000497722 N4BP2L1Q5TBK1 243 aaPredicted RBP1.13□□□□□ -2.23
PSPC1-205ENST00000497722 LCN8Q6JVE9 175 aa1.13□□□□□ -2.23
PSPC1-205ENST00000497722 COA5Q86WW8 74 aa1.13□□□□□ -2.23
PSPC1-205ENST00000497722 MS4A6EQ96DS6 147 aa1.13□□□□□ -2.23
PSPC1-205ENST00000497722 OR52A5Q9H2C5 316 aa1.13□□□□□ -2.23
PSPC1-205ENST00000497722 NRBP2Q9NSY0 501 aa1.13□□□□□ -2.23
PSPC1-205ENST00000497722 BABAM2Q9NXR7 383 aa1.13□□□□□ -2.23
PSPC1-205ENST00000497722 CD300AQ9UGN4 299 aa1.13□□□□□ -2.23
PSPC1-205ENST00000497722 HHLA3Q9XRX5 114 aa1.13□□□□□ -2.23
PSPC1-205ENST00000497722 KDM5BQ9UGL1 1544 aa1.13□□□□□ -2.23
PSPC1-205ENST00000497722 RGS12O14924 1447 aa1.13□□□□□ -2.23
PSPC1-205ENST00000497722 NPATQ14207 1427 aa1.13□□□□□ -2.23
PSPC1-205ENST00000497722 CHD2O14647 1828 aaKnown RBP1.12□□□□□ -2.23
PSPC1-205ENST00000497722 NYNRINQ9P2P1 1898 aaKnown RBP1.12□□□□□ -2.23
PSPC1-205ENST00000497722 CREBL2O60519 120 aaPredicted RBP1.12□□□□□ -2.23
PSPC1-205ENST00000497722 ORM1P02763 201 aa1.12□□□□□ -2.23
PSPC1-205ENST00000497722 HLA-DQB2P05538 268 aa1.12□□□□□ -2.23
PSPC1-205ENST00000497722 ZNF728P0DKX0 622 aa1.12□□□□□ -2.23
PSPC1-205ENST00000497722 CD79BP40259 229 aa1.12□□□□□ -2.23
PSPC1-205ENST00000497722 DAPP51397 102 aa1.12□□□□□ -2.23
PSPC1-205ENST00000497722 ZNF705AQ6ZN79 300 aaPredicted RBP1.12□□□□□ -2.23
PSPC1-205ENST00000497722 PPCDCQ96CD2 204 aa1.12□□□□□ -2.23
PSPC1-205ENST00000497722 NMNAT3Q96T66 252 aa1.12□□□□□ -2.23
PSPC1-205ENST00000497722 DOHHQ9BU89 302 aa1.12□□□□□ -2.23
PSPC1-205ENST00000497722 TMEM109Q9BVC6 243 aa1.12□□□□□ -2.23
PSPC1-205ENST00000497722 ZNF471Q9BX82 626 aaPredicted RBP1.12□□□□□ -2.23
PSPC1-205ENST00000497722 TMEM222Q9H0R3 208 aa1.12□□□□□ -2.23
PSPC1-205ENST00000497722 CST9LQ9H4G1 147 aa1.12□□□□□ -2.23
PSPC1-205ENST00000497722 SPANXB1Q9NS25 103 aaPredicted RBP1.12□□□□□ -2.23
PSPC1-205ENST00000497722 TIMM9Q9Y5J7 89 aa1.12□□□□□ -2.23
PSPC1-205ENST00000497722 NCKAP5O14513 1909 aa1.12□□□□□ -2.23
PSPC1-205ENST00000497722 TMEM94Q12767 1356 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 TMSB15BA0A087X1C1 80 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 C5orf49A4QMS7 147 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 FAM25EA8MYX2 175 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 FTCDNL1E5RQL4 147 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 MKRN2OSH3BPM6 223 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 M0R381 172 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 BHLHE40O14503 412 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 AZIN1O14977 448 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 NDUFB2O95178 105 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 NAPSAO96009 420 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 NPYP01303 97 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 ANGP03950 147 aaKnown RBP1.11□□□□□ -2.23
PSPC1-205ENST00000497722 OCMP0CE72 109 aaPredicted RBP1.11□□□□□ -2.23
PSPC1-205ENST00000497722 FXYD7P58549 80 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 TMED1Q13445 227 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 SDHAF4Q5VUM1 108 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 C1orf174Q8IYL3 243 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 OR5L1Q8NGL2 311 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 OR10D3Q8NH80 312 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 RNF133Q8WVZ7 376 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 CPNE2Q96FN4 548 aaPredicted RBP1.11□□□□□ -2.23
PSPC1-205ENST00000497722 ZNF514Q96K75 400 aaPredicted RBP1.11□□□□□ -2.23
PSPC1-205ENST00000497722 ATP6V1G3Q96LB4 118 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 CFAP53Q96M91 514 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 C7orf50Q9BRJ6 194 aaKnown RBP1.11□□□□□ -2.23
PSPC1-205ENST00000497722 BBS2Q9BXC9 721 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 NSRP1Q9H0G5 558 aaKnown RBP1.11□□□□□ -2.23
PSPC1-205ENST00000497722 ZNHIT6Q9NWK9 470 aaKnown RBP1.11□□□□□ -2.23
PSPC1-205ENST00000497722 PCYT1BQ9Y5K3 369 aaPredicted RBP1.11□□□□□ -2.23
PSPC1-205ENST00000497722 FAM215AQ9Y5M1 114 aa1.11□□□□□ -2.23
PSPC1-205ENST00000497722 NUP153P49790 1475 aaKnown RBP1.11□□□□□ -2.23
PSPC1-205ENST00000497722 GOLGA6L10A6NI86 522 aa1.1□□□□□ -2.23
PSPC1-205ENST00000497722 MT-CO2P00403 227 aa1.1□□□□□ -2.23
PSPC1-205ENST00000497722 NPPAP01160 153 aa1.1□□□□□ -2.23
PSPC1-205ENST00000497722 ATP5G1P05496 136 aa1.1□□□□□ -2.23
PSPC1-205ENST00000497722 CD24P25063 80 aa1.1□□□□□ -2.23
PSPC1-205ENST00000497722 TAS2R20P59543 309 aa1.1□□□□□ -2.23
PSPC1-205ENST00000497722 TBPL1P62380 186 aa1.1□□□□□ -2.23
PSPC1-205ENST00000497722 HOXC5Q00444 222 aa1.1□□□□□ -2.23
PSPC1-205ENST00000497722 SLC51BQ86UW2 128 aa1.1□□□□□ -2.23
PSPC1-205ENST00000497722 RPS19BP1Q86WX3 136 aaKnown RBP1.1□□□□□ -2.23
PSPC1-205ENST00000497722 PACRGLQ8N7B6 248 aa1.1□□□□□ -2.23
PSPC1-205ENST00000497722 OR51T1Q8NGJ9 327 aa1.1□□□□□ -2.23
PSPC1-205ENST00000497722 SLC7A6Q92536 515 aa1.1□□□□□ -2.23
PSPC1-205ENST00000497722 SFRP2Q96HF1 295 aa1.1□□□□□ -2.23
PSPC1-205ENST00000497722 PRO2289Q9P1D8 64 aa1.1□□□□□ -2.23
PSPC1-205ENST00000497722 DSCAML1Q8TD84 2053 aa1.1□□□□□ -2.23
PSPC1-205ENST00000497722 ZNF532Q9HCE3 1301 aa1.1□□□□□ -2.23
PSPC1-205ENST00000497722 IGHV3-64A0A075B6Q5 118 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 MEIKINA0A087WXM9 373 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 TEX50A0A1B0GTY4 177 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 TMEM213A2RRL7 107 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 UGT2B7P16662 529 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 CXCL3P19876 107 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 MIPP30301 263 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 SLCO1A2P46721 670 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 HAAOP46952 286 aa1.09□□□□□ -2.23
PSPC1-205ENST00000497722 IDH3GP51553 393 aaPredicted RBP1.09□□□□□ -2.23
PSPC1-205ENST00000497722 EMP1P54849 157 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms