RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 DOLPP1Q86YN1 238 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 ZNF584Q8IVC4 421 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 OR1L1Q8NH94 360 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 DIRAS2Q96HU8 199 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 SLC35E1Q96K37 410 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 OR52E6Q96RD3 313 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 CDX2Q99626 313 aaPredicted RBP4.32□□□□□ -1.72
BRCA1-224ENST00000497488 ZNF436Q9C0F3 470 aaPredicted RBP4.32□□□□□ -1.72
BRCA1-224ENST00000497488 ENY2Q9NPA8 101 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 OPTCQ9UBM4 332 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 NUFIP1Q9UHK0 495 aaKnown RBP4.32□□□□□ -1.72
BRCA1-224ENST00000497488 BTRCQ9Y297 605 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 GBF1Q92538 1859 aa4.32□□□□□ -1.72
BRCA1-224ENST00000497488 TET1Q8NFU7 2136 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 REV3LO60673 3130 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 C5orf49A4QMS7 147 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 IFITM10A6NMD0 228 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 K7EPK0 472 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 LGALS9O00182 355 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 ISLRO14498 428 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 PI15O43692 258 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 SOD3P08294 240 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 ZBTB25P24278 435 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 ZNF136P52737 540 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 JOSD1Q15040 202 aaPredicted RBP4.31□□□□□ -1.72
BRCA1-224ENST00000497488 HENMT1Q5T8I9 393 aaKnown RBP4.31□□□□□ -1.72
BRCA1-224ENST00000497488 ZNF429Q86V71 674 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 NATD1Q8N6N6 113 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 C12orf29Q8N999 325 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 SUMF2Q8NBJ7 301 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 ZNRF2Q8NHG8 242 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 SLC35G5Q96KT7 338 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 YPEL4Q96NS1 127 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 OLFM3Q96PB7 478 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 OR7D2Q96RA2 312 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 CAMK2N2Q96S95 79 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 LXNQ9BS40 222 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 C6orf62Q9GZU0 229 aaPredicted RBP4.31□□□□□ -1.72
BRCA1-224ENST00000497488 CDC42EP4Q9H3Q1 356 aaKnown RBP4.31□□□□□ -1.72
BRCA1-224ENST00000497488 GINS2Q9Y248 185 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 ANGPT4Q9Y264 503 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 PRUNE2Q8WUY3 3088 aa4.31□□□□□ -1.72
BRCA1-224ENST00000497488 COL1A2P08123 1366 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 COL4A4P53420 1690 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-224ENST00000497488 IGKV6-21A0A0C4DH24 114 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 IGHV3-66A0A0C4DH42 116 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 ZFP92A6NM28 416 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 OR11H12B2RN74 326 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 BHLHE40O14503 412 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 TTRP02766 147 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 HIST1H1TP22492 207 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-224ENST00000497488 GATA2P23769 480 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-224ENST00000497488 CRISP3P54108 245 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 RAB2AP61019 212 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 LYZP61626 148 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 GNG3P63215 75 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 HLA-DRB3P79483 266 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 RUNX1Q01196 453 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 FABP5Q01469 135 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 IL17AQ16552 155 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 ZNF239Q16600 458 aaKnown RBP4.3□□□□□ -1.72
BRCA1-224ENST00000497488 MPV17L2Q567V2 206 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 FAM201AQ5SY85 155 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 FAM78BQ5VT40 261 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 SLC35F6Q8N357 371 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 SMIM20Q8N5G0 67 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 OR11H1Q8NG94 326 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 OR11H2Q8NH07 326 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 OR10J5Q8NHC4 309 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 MCFD2Q8NI22 146 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 BORCS7Q96B45 105 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 ZHX1-C8orf76Q96EF9 292 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 C16orf74Q96GX8 76 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 ACY3Q96HD9 319 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 TBL1XR1Q9BZK7 514 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 OR52D1Q9H346 318 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 MMP26Q9NRE1 261 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 UFC1Q9Y3C8 167 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 XIRP2A4UGR9 3374 aa4.3□□□□□ -1.72
BRCA1-224ENST00000497488 UNC80Q8N2C7 3258 aa4.29□□□□□ -1.72
BRCA1-224ENST00000497488 MICAL3Q7RTP6 2002 aa4.29□□□□□ -1.72
BRCA1-224ENST00000497488 IGHV1OR15-9A0A0B4J2B8 117 aa4.29□□□□□ -1.72
BRCA1-224ENST00000497488 TMEM72A0PK05 275 aa4.29□□□□□ -1.72
BRCA1-224ENST00000497488 SS18L1O75177 396 aaPredicted RBP4.29□□□□□ -1.72
BRCA1-224ENST00000497488 DHFRP00374 187 aa4.29□□□□□ -1.72
BRCA1-224ENST00000497488 INSP01308 110 aa4.29□□□□□ -1.72
BRCA1-224ENST00000497488 SCGB1C2P0DMR2 95 aa4.29□□□□□ -1.72
BRCA1-224ENST00000497488 IMPA1P29218 277 aa4.29□□□□□ -1.72
BRCA1-224ENST00000497488 MAP2K4P45985 399 aa4.29□□□□□ -1.72
BRCA1-224ENST00000497488 TMEM267Q0VDI3 215 aaPredicted RBP4.29□□□□□ -1.72
BRCA1-224ENST00000497488 TEX36Q5VZQ5 186 aa4.29□□□□□ -1.72
BRCA1-224ENST00000497488 ZNF440Q8IYI8 595 aa4.29□□□□□ -1.72
BRCA1-224ENST00000497488 SCGB1C1Q8TD33 95 aa4.29□□□□□ -1.72
BRCA1-224ENST00000497488 C15orf40Q8WUR7 153 aa4.29□□□□□ -1.72
BRCA1-224ENST00000497488 KCTD4Q8WVF5 259 aa4.29□□□□□ -1.72
BRCA1-224ENST00000497488 LINC00477Q96M19 166 aa4.29□□□□□ -1.72
BRCA1-224ENST00000497488 PPP1R2P1Q96PQ5 205 aa4.29□□□□□ -1.72
BRCA1-224ENST00000497488 FGF23Q9GZV9 251 aaPredicted RBP4.29□□□□□ -1.72
BRCA1-224ENST00000497488 BIN3Q9NQY0 253 aa4.29□□□□□ -1.72
BRCA1-224ENST00000497488 CA10Q9NS85 328 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms