RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ZNF695Q8IW36 515 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 GCSAMQ8N6F7 178 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 RND1Q92730 232 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 BADQ92934 168 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 BORCS7Q96B45 105 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 DYNLL2Q96FJ2 89 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 GMPPAQ96IJ6 420 aaPredicted RBP2.57□□□□□ -2
SNRNP48-202ENST00000496946 YPEL2Q96QA6 119 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 GFI1Q99684 422 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 SPIN2AQ99865 258 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 SPIN2BQ9BPZ2 258 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 MRPL45Q9BRJ2 306 aaKnown RBP2.57□□□□□ -2
SNRNP48-202ENST00000496946 RPP25Q9BUL9 199 aaKnown RBP2.57□□□□□ -2
SNRNP48-202ENST00000496946 TM2D2Q9BX73 214 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 RERGLQ9H628 205 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 EDA2RQ9HAV5 297 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 TMEM106BQ9NUM4 274 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 AIG1Q9NVV5 245 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 EHFQ9NZC4 300 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 CLCF1Q9UBD9 225 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 MARCOQ9UEW3 520 aaPredicted RBP2.57□□□□□ -2
SNRNP48-202ENST00000496946 AK3Q9UIJ7 227 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 PILRAQ9UKJ1 303 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 FZR1Q9UM11 496 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 SIRT4Q9Y6E7 314 aaPredicted RBP2.57□□□□□ -2
SNRNP48-202ENST00000496946 MARF1Q9Y4F3 1742 aaKnown RBP2.57□□□□□ -2
SNRNP48-202ENST00000496946 ADAMTS13Q76LX8 1427 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 PTPN23Q9H3S7 1636 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 PLIN4Q96Q06 1357 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 CACNA1FO60840 1977 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 GPATCH8Q9UKJ3 1502 aaKnown RBP2.57□□□□□ -2
SNRNP48-202ENST00000496946 TRGV10A0A0A0MS01 117 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 RBFOX3A6NFN3 312 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 OR51F1A6NGY5 319 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 RHODO00212 210 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 ZNF593O00488 134 aaPredicted RBP2.57□□□□□ -2
SNRNP48-202ENST00000496946 ZNF195O14628 629 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 RER1O15258 196 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 TAPBPO15533 448 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 C1orf105O95561 183 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 HLA-DQA2P01906 255 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 GPX1P07203 203 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 CXCL1P09341 107 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 TPT1P13693 172 aaKnown RBP2.57□□□□□ -2
SNRNP48-202ENST00000496946 CPMP14384 443 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 GATA1P15976 413 aaPredicted RBP2.57□□□□□ -2
SNRNP48-202ENST00000496946 IGFBP3P17936 291 aaPredicted RBP2.57□□□□□ -2
SNRNP48-202ENST00000496946 BCL3P20749 454 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 DUTP33316 252 aaKnown RBP2.57□□□□□ -2
SNRNP48-202ENST00000496946 FABP6P51161 128 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 KIAA0040Q15053 153 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 ZNF672Q499Z4 452 aaPredicted RBP2.57□□□□□ -2
SNRNP48-202ENST00000496946 SPATA45Q537H7 98 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 DMKNQ6E0U4 476 aaPredicted RBP2.57□□□□□ -2
SNRNP48-202ENST00000496946 STAC2Q6ZMT1 411 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 SLC22A18ASQ8N1D0 253 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 TSSK6Q9BXA6 273 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 VSIRQ9H7M9 311 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 NOP16Q9Y3C1 178 aaKnown RBP2.57□□□□□ -2
SNRNP48-202ENST00000496946 YTHDF2Q9Y5A9 579 aaKnown RBP2.57□□□□□ -2
SNRNP48-202ENST00000496946 TUBGCP6Q96RT7 1819 aa2.57□□□□□ -2
SNRNP48-202ENST00000496946 MYO3AQ8NEV4 1616 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 CICQ96RK0 1608 aaPredicted RBP2.56□□□□□ -2
SNRNP48-202ENST00000496946 TRAV8-6A0A0B4J262 113 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 UMAD1C9J7I0 102 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 ZNF670-ZNF695F2Z2N8 137 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 CREBL2O60519 120 aaPredicted RBP2.56□□□□□ -2
SNRNP48-202ENST00000496946 REM1O75628 298 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 RENP00797 406 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 CGAP01215 116 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 TTRP02766 147 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 IL5P05113 134 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 IL3P08700 152 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 SEC11BP0C7V7 166 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 IFITM1P13164 125 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 ZNF93P35789 620 aaPredicted RBP2.56□□□□□ -2
SNRNP48-202ENST00000496946 TAS2R19P59542 299 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 HILS1P60008 231 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 ZNF146Q15072 292 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 DUSP5Q16690 384 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 ALG10Q5BKT4 473 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 TTC32Q5I0X7 151 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 TSPO2Q5TGU0 170 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 TMEM64Q6YI46 380 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 Q6ZUT4 128 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 ZNF534Q76KX8 674 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 CEACAM19Q7Z692 300 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 CMC1Q7Z7K0 106 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 PIP4P1Q86T03 277 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 C1orf174Q8IYL3 243 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 OR5AR1Q8NGP9 310 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 OR10D3Q8NH80 312 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 TMEM170AQ8WVE7 144 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 TWIST2Q8WVJ9 160 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 MS4A6EQ96DS6 147 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 RTP4Q96DX8 246 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 TMEM222Q9H0R3 208 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 RPRMQ9NS64 109 aa2.56□□□□□ -2
SNRNP48-202ENST00000496946 TECRQ9NZ01 308 aaKnown RBP2.56□□□□□ -2
SNRNP48-202ENST00000496946 RNF7Q9UBF6 113 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms