RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 SDSLQ96GA7 329 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 CIB3Q96Q77 187 aaPredicted RBP10.83□□□□□ -0.68
GARNL3-220ENST00000496711 OR4C12Q96R67 309 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 WDR61Q9GZS3 305 aaKnown RBP10.83□□□□□ -0.68
GARNL3-220ENST00000496711 IFI27L2Q9H2X8 130 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 SMCO4Q9NRQ5 59 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 CLN8Q9UBY8 286 aa10.83□□□□□ -0.68
GARNL3-220ENST00000496711 BOD1L1Q8NFC6 3051 aa10.82□□□□□ -0.68
GARNL3-220ENST00000496711 TRAV1-1A0A0B4J248 108 aa10.82□□□□□ -0.68
GARNL3-220ENST00000496711 CYB5R3P00387 301 aaPredicted RBP10.82□□□□□ -0.68
GARNL3-220ENST00000496711 OR13C7P0DN81 318 aa10.82□□□□□ -0.68
GARNL3-220ENST00000496711 SELLP14151 372 aa10.82□□□□□ -0.68
GARNL3-220ENST00000496711 PTAFRP25105 342 aa10.82□□□□□ -0.68
GARNL3-220ENST00000496711 LINC00205P59089 165 aa10.82□□□□□ -0.68
GARNL3-220ENST00000496711 SERF2P84101 59 aa10.82□□□□□ -0.68
GARNL3-220ENST00000496711 NCR3LG1Q68D85 454 aa10.82□□□□□ -0.68
GARNL3-220ENST00000496711 OR8G2PQ6IF36 304 aa10.82□□□□□ -0.68
GARNL3-220ENST00000496711 WFDC8Q8IUA0 241 aa10.82□□□□□ -0.68
GARNL3-220ENST00000496711 PLPPR2Q96GM1 343 aa10.82□□□□□ -0.68
GARNL3-220ENST00000496711 RPS10P5Q9NQ39 176 aa10.82□□□□□ -0.68
GARNL3-220ENST00000496711 ACACAQ13085 2346 aa10.82□□□□□ -0.68
GARNL3-220ENST00000496711 DOCK11Q5JSL3 2073 aa10.82□□□□□ -0.68
GARNL3-220ENST00000496711 M0R036 132 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 M0R1X1 148 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 ZG16O60844 167 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 FCGR3BO75015 233 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 RBMXL2O75526 392 aaKnown RBP10.81□□□□□ -0.68
GARNL3-220ENST00000496711 HPRT1P00492 218 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 CTRB1P17538 263 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 PAX6P26367 422 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 TBR1Q16650 682 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 HAGHQ16775 308 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 ZNF506Q5JVG8 444 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 CTRB2Q6GPI1 263 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 ETV3LQ6ZN32 361 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 GAFA1Q96PS6 74 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 UNKLQ9H9P5 680 aaKnown RBP10.81□□□□□ -0.68
GARNL3-220ENST00000496711 SH3BGRL2Q9UJC5 107 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 ZNF835Q9Y2P0 537 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 APC2O95996 2303 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 RP1L1Q8IWN7 2480 aaPredicted RBP10.81□□□□□ -0.68
GARNL3-220ENST00000496711 MGAQ8IWI9 3026 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 TRGV10A0A0A0MS01 117 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 C7orf77A4D0Y5 90 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 FAM90A9PA6NNJ1 464 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 ITGB1BP1O14713 200 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 RBFOX2O43251 390 aaKnown RBP eCLIP10.81□□□□□ -0.68
GARNL3-220ENST00000496711 PROP1O75360 226 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 SCAF4O95104 1147 aaKnown RBP10.81□□□□□ -0.68
GARNL3-220ENST00000496711 SNRNP70P08621 437 aaKnown RBP10.81□□□□□ -0.68
GARNL3-220ENST00000496711 CGB3P0DN86 165 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 CGB7P0DN87 165 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 IRF2P14316 349 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 RAB7AP51149 207 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 ICAM4Q14773 271 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 RHEBQ15382 184 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 ATP6V1FQ16864 119 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 C17orf58Q2M2W7 97 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 RPL39P5Q59GN2 51 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 SOHLH1Q5JUK2 328 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 CLDND2Q8NHS1 167 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 TAF15Q92804 592 aaKnown RBP eCLIP10.81□□□□□ -0.68
GARNL3-220ENST00000496711 ZDHHC16Q969W1 377 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 AIFM2Q9BRQ8 373 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 TMEM147Q9BVK8 224 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 FAM234AQ9H0X4 552 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 ZNF665Q9H7R5 613 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 RPRMQ9NS64 109 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 JKAMPQ9P055 326 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 MLXQ9UH92 298 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 TIMM9Q9Y5J7 89 aa10.81□□□□□ -0.68
GARNL3-220ENST00000496711 KBTBD11-OT1A0A1B0GTJ5 212 aa10.8□□□□□ -0.68
GARNL3-220ENST00000496711 CEBPZOSA8MTT3 80 aa10.8□□□□□ -0.68
GARNL3-220ENST00000496711 HSPB1P04792 205 aaKnown RBP10.8□□□□□ -0.68
GARNL3-220ENST00000496711 SRP19P09132 144 aaKnown RBP10.8□□□□□ -0.68
GARNL3-220ENST00000496711 KIR2DS2P43631 304 aa10.8□□□□□ -0.68
GARNL3-220ENST00000496711 ZNF134P52741 427 aa10.8□□□□□ -0.68
GARNL3-220ENST00000496711 TMEM41BQ5BJD5 291 aa10.8□□□□□ -0.68
GARNL3-220ENST00000496711 DUX4L9Q6RFH8 374 aaPredicted RBP10.8□□□□□ -0.68
GARNL3-220ENST00000496711 SSX8Q7RTT4 187 aa10.8□□□□□ -0.68
GARNL3-220ENST00000496711 C15orf54Q8N8G6 183 aa10.8□□□□□ -0.68
GARNL3-220ENST00000496711 RXFP4Q8TDU9 374 aa10.8□□□□□ -0.68
GARNL3-220ENST00000496711 PINX1Q96BK5 328 aaKnown RBP10.8□□□□□ -0.68
GARNL3-220ENST00000496711 DIRC2Q96SL1 478 aa10.8□□□□□ -0.68
GARNL3-220ENST00000496711 C20orf24Q9BUV8 137 aa10.8□□□□□ -0.68
GARNL3-220ENST00000496711 SCNM1Q9BWG6 230 aa10.8□□□□□ -0.68
GARNL3-220ENST00000496711 VSIRQ9H7M9 311 aa10.8□□□□□ -0.68
GARNL3-220ENST00000496711 GFOD1Q9NXC2 390 aa10.8□□□□□ -0.68
GARNL3-220ENST00000496711 PRELID3BQ9Y3B1 194 aa10.8□□□□□ -0.68
GARNL3-220ENST00000496711 DPRXA6NFQ7 191 aa10.79□□□□□ -0.68
GARNL3-220ENST00000496711 PMS2P5A8MQ11 134 aa10.79□□□□□ -0.68
GARNL3-220ENST00000496711 K7ENP7 123 aa10.79□□□□□ -0.68
GARNL3-220ENST00000496711 SLC31A2O15432 143 aa10.79□□□□□ -0.68
GARNL3-220ENST00000496711 OR9G9P0C7N8 305 aa10.79□□□□□ -0.68
GARNL3-220ENST00000496711 AKR1C3P42330 323 aa10.79□□□□□ -0.68
GARNL3-220ENST00000496711 ERVK-16P61578 105 aa10.79□□□□□ -0.68
GARNL3-220ENST00000496711 AARDQ4LEZ3 155 aa10.79□□□□□ -0.68
GARNL3-220ENST00000496711 PRAMEF5Q5TYX0 476 aa10.79□□□□□ -0.68
GARNL3-220ENST00000496711 TEX36Q5VZQ5 186 aa10.79□□□□□ -0.68
GARNL3-220ENST00000496711 ZNF787Q6DD87 383 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms