RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 APOA2P02652 100 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 CTSDP07339 412 aaPredicted RBP17.49■□□□□ 0.39
C9orf3-222ENST00000496567 FAM106CPP0CH98 169 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 RAB13P51153 203 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 CCR6P51684 374 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 CATR1Q13166 79 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 EIF4EBP1Q13541 118 aaPredicted RBP17.49■□□□□ 0.39
C9orf3-222ENST00000496567 THNSL2Q86YJ6 484 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 ZNF383Q8NA42 475 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 OR5AN1Q8NGI8 311 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 CAPSLQ8WWF8 208 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 GPR132Q9UNW8 380 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 PRELID3BQ9Y3B1 194 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 POMT1Q9Y6A1 747 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 IGHV3-72A0A0B4J1Y9 119 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 RNF212BA8MTL3 300 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 HOXA3O43365 443 aaPredicted RBP17.49■□□□□ 0.39
C9orf3-222ENST00000496567 TNFSF12O43508 249 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 IGHV4-59P01825 116 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 BTCP35070 178 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 PHLDA2Q53GA4 152 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 GLDNQ6ZMI3 551 aaPredicted RBP17.49■□□□□ 0.39
C9orf3-222ENST00000496567 KCTD9Q7L273 389 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 TMEM86BQ8N661 226 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 ZDHHC22Q8N966 263 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 JMJD8Q96S16 334 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 SLC2A9Q9NRM0 540 aa17.49■□□□□ 0.39
C9orf3-222ENST00000496567 H0YJW9 148 aa17.48■□□□□ 0.39
C9orf3-222ENST00000496567 PGLYRP1O75594 196 aaPredicted RBP17.48■□□□□ 0.39
C9orf3-222ENST00000496567 SNRNP70P08621 437 aaKnown RBP17.48■□□□□ 0.39
C9orf3-222ENST00000496567 RND3P61587 244 aa17.48■□□□□ 0.39
C9orf3-222ENST00000496567 CCDC71LQ8N9Z2 235 aa17.48■□□□□ 0.39
C9orf3-222ENST00000496567 PIFOQ8TCI5 191 aa17.48■□□□□ 0.39
C9orf3-222ENST00000496567 TCTEX1D2Q8WW35 142 aa17.48■□□□□ 0.39
C9orf3-222ENST00000496567 COPZ2Q9P299 210 aa17.48■□□□□ 0.39
C9orf3-222ENST00000496567 PITPNC1Q9UKF7 332 aa17.48■□□□□ 0.39
C9orf3-222ENST00000496567 WASHC3Q9Y3C0 194 aa17.48■□□□□ 0.39
C9orf3-222ENST00000496567 A0A0A6YYJ9 748 aa17.47■□□□□ 0.39
C9orf3-222ENST00000496567 LINC00473A8K010 186 aa17.47■□□□□ 0.39
C9orf3-222ENST00000496567 NDUFB6O95139 128 aa17.47■□□□□ 0.39
C9orf3-222ENST00000496567 VENTXO95231 258 aa17.47■□□□□ 0.39
C9orf3-222ENST00000496567 RRASP10301 218 aa17.47■□□□□ 0.39
C9orf3-222ENST00000496567 PI3P19957 117 aa17.47■□□□□ 0.39
C9orf3-222ENST00000496567 PIGPP57054 158 aa17.47■□□□□ 0.39
C9orf3-222ENST00000496567 LINC00205P59089 165 aa17.47■□□□□ 0.39
C9orf3-222ENST00000496567 CBX3Q13185 183 aa17.47■□□□□ 0.39
C9orf3-222ENST00000496567 HES1Q14469 280 aa17.47■□□□□ 0.39
C9orf3-222ENST00000496567 CHPT1Q8WUD6 406 aa17.47■□□□□ 0.39
C9orf3-222ENST00000496567 DDB2Q92466 427 aa17.47■□□□□ 0.39
C9orf3-222ENST00000496567 SLC35D1Q9NTN3 355 aa17.47■□□□□ 0.39
C9orf3-222ENST00000496567 FAM240BA0A1B0GVZ2 78 aa17.46■□□□□ 0.39
C9orf3-222ENST00000496567 H7C2Y5 167 aa17.46■□□□□ 0.39
C9orf3-222ENST00000496567 PTTG1O95997 202 aa17.46■□□□□ 0.39
C9orf3-222ENST00000496567 IGKV1D-33P01593 117 aa17.46■□□□□ 0.39
C9orf3-222ENST00000496567 IGKV1-33P01594 117 aa17.46■□□□□ 0.39
C9orf3-222ENST00000496567 RLN1P04808 185 aa17.46■□□□□ 0.39
C9orf3-222ENST00000496567 CD24P25063 80 aa17.46■□□□□ 0.39
C9orf3-222ENST00000496567 SLC6A1P30531 599 aa17.46■□□□□ 0.39
C9orf3-222ENST00000496567 HILS1P60008 231 aa17.46■□□□□ 0.39
C9orf3-222ENST00000496567 RPL30P62888 115 aaKnown RBP17.46■□□□□ 0.39
C9orf3-222ENST00000496567 EBI3Q14213 229 aa17.46■□□□□ 0.39
C9orf3-222ENST00000496567 OXA1LQ15070 435 aa17.46■□□□□ 0.39
C9orf3-222ENST00000496567 RTL8BQ17RB0 113 aa17.46■□□□□ 0.39
C9orf3-222ENST00000496567 PDPNQ86YL7 162 aa17.46■□□□□ 0.39
C9orf3-222ENST00000496567 CENPSQ8N2Z9 138 aa17.46■□□□□ 0.39
C9orf3-222ENST00000496567 OR2T10Q8NGZ9 312 aa17.46■□□□□ 0.39
C9orf3-222ENST00000496567 GPHA2Q96T91 129 aa17.46■□□□□ 0.39
C9orf3-222ENST00000496567 RTBDNQ9BSG5 229 aaPredicted RBP17.46■□□□□ 0.39
C9orf3-222ENST00000496567 C5orf66Q9H5L9 145 aa17.46■□□□□ 0.39
C9orf3-222ENST00000496567 TCF19Q9Y242 345 aa17.46■□□□□ 0.39
C9orf3-222ENST00000496567 VSIG4Q9Y279 399 aa17.46■□□□□ 0.39
C9orf3-222ENST00000496567 MOSP00540 346 aa17.45■□□□□ 0.38
C9orf3-222ENST00000496567 IFNA2P01563 188 aa17.45■□□□□ 0.38
C9orf3-222ENST00000496567 SPNP16150 400 aa17.45■□□□□ 0.38
C9orf3-222ENST00000496567 KIR2DS2P43631 304 aa17.45■□□□□ 0.38
C9orf3-222ENST00000496567 TRIM16LQ309B1 348 aa17.45■□□□□ 0.38
C9orf3-222ENST00000496567 NRARPQ7Z6K4 114 aa17.45■□□□□ 0.38
C9orf3-222ENST00000496567 TBC1D26Q86UD7 250 aa17.45■□□□□ 0.38
C9orf3-222ENST00000496567 OR51H1Q8NH63 302 aa17.45■□□□□ 0.38
C9orf3-222ENST00000496567 ZFHX3Q15911 3703 aa17.45■□□□□ 0.38
C9orf3-222ENST00000496567 MPPED1O15442 326 aa17.45■□□□□ 0.38
C9orf3-222ENST00000496567 TCF21O43680 179 aa17.45■□□□□ 0.38
C9orf3-222ENST00000496567 TCTEX1D1Q8N7M0 179 aa17.45■□□□□ 0.38
C9orf3-222ENST00000496567 LIN7CQ9NUP9 197 aaKnown RBP17.45■□□□□ 0.38
C9orf3-222ENST00000496567 VPREB3Q9UKI3 123 aa17.45■□□□□ 0.38
C9orf3-222ENST00000496567 DNAJC9-AS1A6NH13 148 aa17.44■□□□□ 0.38
C9orf3-222ENST00000496567 CLDN34H7C241 214 aa17.44■□□□□ 0.38
C9orf3-222ENST00000496567 FCGR3BO75015 233 aa17.44■□□□□ 0.38
C9orf3-222ENST00000496567 TMEM11P17152 192 aa17.44■□□□□ 0.38
C9orf3-222ENST00000496567 F2RP25116 425 aa17.44■□□□□ 0.38
C9orf3-222ENST00000496567 SLC9A3R2Q15599 337 aa17.44■□□□□ 0.38
C9orf3-222ENST00000496567 LY6EQ16553 131 aa17.44■□□□□ 0.38
C9orf3-222ENST00000496567 DHRS7BQ6IAN0 325 aaPredicted RBP17.44■□□□□ 0.38
C9orf3-222ENST00000496567 LIAT1Q6ZQX7 453 aa17.44■□□□□ 0.38
C9orf3-222ENST00000496567 ENKURQ8TC29 256 aa17.44■□□□□ 0.38
C9orf3-222ENST00000496567 CD300LFQ8TDQ1 290 aa17.44■□□□□ 0.38
C9orf3-222ENST00000496567 EAF1Q96JC9 268 aaPredicted RBP17.44■□□□□ 0.38
C9orf3-222ENST00000496567 TNFRSF19Q9NS68 423 aa17.44■□□□□ 0.38
C9orf3-222ENST00000496567 A6NDX4 124 aa17.43■□□□□ 0.38
C9orf3-222ENST00000496567 OR4C13Q8NGP0 309 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms