RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 COMMD1Q8N668 190 aa11.31□□□□□ -0.6
CXCL12-208ENST00000496375 Q8N6K4 173 aa11.31□□□□□ -0.6
CXCL12-208ENST00000496375 OR6Q1Q8NGQ2 317 aa11.31□□□□□ -0.6
CXCL12-208ENST00000496375 MCFD2Q8NI22 146 aa11.31□□□□□ -0.6
CXCL12-208ENST00000496375 MAFIPQ8WZ33 124 aa11.31□□□□□ -0.6
CXCL12-208ENST00000496375 MCRIP2Q9BUT9 160 aaKnown RBP11.31□□□□□ -0.6
CXCL12-208ENST00000496375 SLIRPQ9GZT3 109 aaKnown RBP11.31□□□□□ -0.6
CXCL12-208ENST00000496375 NXF2Q9GZY0 626 aaKnown RBP11.31□□□□□ -0.6
CXCL12-208ENST00000496375 C11orf54Q9H0W9 315 aaPredicted RBP11.31□□□□□ -0.6
CXCL12-208ENST00000496375 RDH8Q9NYR8 311 aa11.31□□□□□ -0.6
CXCL12-208ENST00000496375 ANXA10Q9UJ72 324 aa11.31□□□□□ -0.6
CXCL12-208ENST00000496375 GAB2Q9UQC2 676 aa11.31□□□□□ -0.6
CXCL12-208ENST00000496375 SAA2-SAA4A0A096LPE2 208 aa11.3□□□□□ -0.6
CXCL12-208ENST00000496375 AP4M1O00189 453 aa11.3□□□□□ -0.6
CXCL12-208ENST00000496375 RAB29O14966 203 aa11.3□□□□□ -0.6
CXCL12-208ENST00000496375 HSPA12AO43301 675 aa11.3□□□□□ -0.6
CXCL12-208ENST00000496375 SAA2P0DJI9 122 aaPredicted RBP11.3□□□□□ -0.6
CXCL12-208ENST00000496375 NAT1P18440 290 aa11.3□□□□□ -0.6
CXCL12-208ENST00000496375 CD1BP29016 333 aa11.3□□□□□ -0.6
CXCL12-208ENST00000496375 GPR12P47775 334 aa11.3□□□□□ -0.6
CXCL12-208ENST00000496375 ZNF695Q8IW36 515 aa11.3□□□□□ -0.6
CXCL12-208ENST00000496375 H1FOOQ8IZA3 346 aaPredicted RBP11.3□□□□□ -0.6
CXCL12-208ENST00000496375 Q8N9W7 124 aa11.3□□□□□ -0.6
CXCL12-208ENST00000496375 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.3□□□□□ -0.6
CXCL12-208ENST00000496375 OR2T10Q8NGZ9 312 aa11.3□□□□□ -0.6
CXCL12-208ENST00000496375 OR10J5Q8NHC4 309 aa11.3□□□□□ -0.6
CXCL12-208ENST00000496375 DUX3Q96PT4 197 aa11.3□□□□□ -0.6
CXCL12-208ENST00000496375 P2RX4Q99571 388 aa11.3□□□□□ -0.6
CXCL12-208ENST00000496375 MIXL1Q9H2W2 232 aa11.3□□□□□ -0.6
CXCL12-208ENST00000496375 SCPEP1Q9HB40 452 aa11.3□□□□□ -0.6
CXCL12-208ENST00000496375 AKIP1Q9NQ31 210 aa11.3□□□□□ -0.6
CXCL12-208ENST00000496375 LIN7CQ9NUP9 197 aaKnown RBP11.3□□□□□ -0.6
CXCL12-208ENST00000496375 NBEAL2Q6ZNJ1 2754 aa11.29□□□□□ -0.6
CXCL12-208ENST00000496375 A0A1B0GVG6 124 aa11.29□□□□□ -0.6
CXCL12-208ENST00000496375 ST8SIA5O15466 376 aa11.29□□□□□ -0.6
CXCL12-208ENST00000496375 PROP1O75360 226 aa11.29□□□□□ -0.6
CXCL12-208ENST00000496375 PTHLHP12272 177 aa11.29□□□□□ -0.6
CXCL12-208ENST00000496375 CD69Q07108 199 aa11.29□□□□□ -0.6
CXCL12-208ENST00000496375 TEX38Q6PEX7 206 aa11.29□□□□□ -0.6
CXCL12-208ENST00000496375 BEST4Q8NFU0 473 aa11.29□□□□□ -0.6
CXCL12-208ENST00000496375 GPX8Q8TED1 209 aa11.29□□□□□ -0.6
CXCL12-208ENST00000496375 SNAPC3Q92966 411 aa11.29□□□□□ -0.6
CXCL12-208ENST00000496375 RAX2Q96IS3 184 aa11.29□□□□□ -0.6
CXCL12-208ENST00000496375 NABP2Q9BQ15 211 aa11.29□□□□□ -0.6
CXCL12-208ENST00000496375 ST6GALNAC5Q9BVH7 336 aa11.29□□□□□ -0.6
CXCL12-208ENST00000496375 ZNF736B4DX44 427 aaPredicted RBP11.28□□□□□ -0.6
CXCL12-208ENST00000496375 SULT1C2O00338 296 aa11.28□□□□□ -0.6
CXCL12-208ENST00000496375 BET1O15155 118 aa11.28□□□□□ -0.6
CXCL12-208ENST00000496375 TUSC2O75896 110 aa11.28□□□□□ -0.6
CXCL12-208ENST00000496375 MOSP00540 346 aa11.28□□□□□ -0.6
CXCL12-208ENST00000496375 RPLP1P05386 114 aaKnown RBP11.28□□□□□ -0.6
CXCL12-208ENST00000496375 PRSS3P35030 304 aa11.28□□□□□ -0.6
CXCL12-208ENST00000496375 RAB25P57735 213 aa11.28□□□□□ -0.6
CXCL12-208ENST00000496375 Q6ZNX1 250 aa11.28□□□□□ -0.6
CXCL12-208ENST00000496375 GVQW1Q8N7I0 195 aa11.28□□□□□ -0.6
CXCL12-208ENST00000496375 PPP1R14BQ96C90 147 aa11.28□□□□□ -0.6
CXCL12-208ENST00000496375 S1PR3Q99500 378 aa11.28□□□□□ -0.6
CXCL12-208ENST00000496375 B9D2Q9BPU9 175 aa11.28□□□□□ -0.6
CXCL12-208ENST00000496375 RASL11BQ9BPW5 248 aa11.28□□□□□ -0.6
CXCL12-208ENST00000496375 PLSCR3Q9NRY6 295 aa11.28□□□□□ -0.6
CXCL12-208ENST00000496375 CCL24O00175 119 aa11.27□□□□□ -0.61
CXCL12-208ENST00000496375 CTDSP2O14595 271 aa11.27□□□□□ -0.61
CXCL12-208ENST00000496375 CD40LGP29965 261 aa11.27□□□□□ -0.61
CXCL12-208ENST00000496375 S100A5P33763 92 aa11.27□□□□□ -0.61
CXCL12-208ENST00000496375 OR3A3P47888 321 aa11.27□□□□□ -0.61
CXCL12-208ENST00000496375 CXorf66Q5JRM2 361 aaPredicted RBP11.27□□□□□ -0.61
CXCL12-208ENST00000496375 LCNL1Q6ZST4 164 aa11.27□□□□□ -0.61
CXCL12-208ENST00000496375 LAX1Q8IWV1 398 aa11.27□□□□□ -0.61
CXCL12-208ENST00000496375 MINDY2Q8NBR6 621 aa11.27□□□□□ -0.61
CXCL12-208ENST00000496375 OR5AP2Q8NGF4 316 aa11.27□□□□□ -0.61
CXCL12-208ENST00000496375 C15orf40Q8WUR7 153 aa11.27□□□□□ -0.61
CXCL12-208ENST00000496375 RBMXL1Q96E39 390 aaKnown RBP11.27□□□□□ -0.61
CXCL12-208ENST00000496375 ABHD14BQ96IU4 210 aa11.27□□□□□ -0.61
CXCL12-208ENST00000496375 GINS4Q9BRT9 223 aa11.27□□□□□ -0.61
CXCL12-208ENST00000496375 GON7Q9BXV9 100 aa11.27□□□□□ -0.61
CXCL12-208ENST00000496375 MRPL20Q9BYC9 149 aaKnown RBP11.27□□□□□ -0.61
CXCL12-208ENST00000496375 RABL2AQ9UBK7 228 aaPredicted RBP11.27□□□□□ -0.61
CXCL12-208ENST00000496375 RABL2BQ9UNT1 228 aa11.27□□□□□ -0.61
CXCL12-208ENST00000496375 OR5H14A6NHG9 310 aa11.26□□□□□ -0.61
CXCL12-208ENST00000496375 PPP5CP53041 499 aa11.26□□□□□ -0.61
CXCL12-208ENST00000496375 DGCR2P98153 550 aa11.26□□□□□ -0.61
CXCL12-208ENST00000496375 ZNF45Q02386 682 aa11.26□□□□□ -0.61
CXCL12-208ENST00000496375 FOXE3Q13461 319 aa11.26□□□□□ -0.61
CXCL12-208ENST00000496375 RGS21Q2M5E4 152 aa11.26□□□□□ -0.61
CXCL12-208ENST00000496375 DEFB136Q30KP8 78 aa11.26□□□□□ -0.61
CXCL12-208ENST00000496375 RPL39P5Q59GN2 51 aa11.26□□□□□ -0.61
CXCL12-208ENST00000496375 OR8H1Q8NGG4 311 aa11.26□□□□□ -0.61
CXCL12-208ENST00000496375 OR5AN1Q8NGI8 311 aa11.26□□□□□ -0.61
CXCL12-208ENST00000496375 OR8U1Q8NH10 309 aa11.26□□□□□ -0.61
CXCL12-208ENST00000496375 HSPB9Q9BQS6 159 aa11.26□□□□□ -0.61
CXCL12-208ENST00000496375 EXTL2Q9UBQ6 330 aa11.26□□□□□ -0.61
CXCL12-208ENST00000496375 ZMAT5Q9UDW3 170 aaKnown RBP11.26□□□□□ -0.61
CXCL12-208ENST00000496375 ZNF221Q9UK13 617 aa11.26□□□□□ -0.61
CXCL12-208ENST00000496375 OR2W1Q9Y3N9 320 aa11.26□□□□□ -0.61
CXCL12-208ENST00000496375 FAM25AB3EWG3 89 aa11.25□□□□□ -0.61
CXCL12-208ENST00000496375 FAM25CB3EWG5 89 aa11.25□□□□□ -0.61
CXCL12-208ENST00000496375 FAM25GB3EWG6 89 aa11.25□□□□□ -0.61
CXCL12-208ENST00000496375 J3QRK9 145 aa11.25□□□□□ -0.61
CXCL12-208ENST00000496375 ELANEP08246 267 aa11.25□□□□□ -0.61
CXCL12-208ENST00000496375 OR8U9P0C7N5 309 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms