RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 HOXA1P49639 335 aaPredicted RBP9.22□□□□□ -0.93
CMSS1-208ENST00000496116 EDDM3BP56851 147 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 LINC00518Q8N0U6 118 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 CYB561D1Q8N8Q1 229 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 PRSS33Q8NF86 280 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 ISOC2Q96AB3 205 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 TMEM147Q9BVK8 224 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 MRPL37Q9BZE1 423 aaKnown RBP9.22□□□□□ -0.93
CMSS1-208ENST00000496116 CISD1Q9NZ45 108 aaKnown RBP9.22□□□□□ -0.93
CMSS1-208ENST00000496116 GNG13Q9P2W3 67 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 CLN8Q9UBY8 286 aa9.22□□□□□ -0.93
CMSS1-208ENST00000496116 IGHV3OR15-7A0A075B7D8 119 aa9.21□□□□□ -0.94
CMSS1-208ENST00000496116 CEBPZOSA8MTT3 80 aa9.21□□□□□ -0.94
CMSS1-208ENST00000496116 MKRN2OSH3BPM6 223 aa9.21□□□□□ -0.94
CMSS1-208ENST00000496116 F2RL2O00254 374 aa9.21□□□□□ -0.94
CMSS1-208ENST00000496116 ZG16O60844 167 aa9.21□□□□□ -0.94
CMSS1-208ENST00000496116 IFNA1P01562 189 aa9.21□□□□□ -0.94
CMSS1-208ENST00000496116 DAOP14920 347 aa9.21□□□□□ -0.94
CMSS1-208ENST00000496116 LCN15Q6UWW0 184 aa9.21□□□□□ -0.94
CMSS1-208ENST00000496116 ZNF429Q86V71 674 aa9.21□□□□□ -0.94
CMSS1-208ENST00000496116 ZFP82Q8N141 532 aa9.21□□□□□ -0.94
CMSS1-208ENST00000496116 ZNF561Q8N587 486 aa9.21□□□□□ -0.94
CMSS1-208ENST00000496116 ZNRF1Q8ND25 227 aa9.21□□□□□ -0.94
CMSS1-208ENST00000496116 C2CD4CQ8TF44 421 aa9.21□□□□□ -0.94
CMSS1-208ENST00000496116 ITLN1Q8WWA0 313 aa9.21□□□□□ -0.94
CMSS1-208ENST00000496116 R3HDM4Q96D70 268 aa9.21□□□□□ -0.94
CMSS1-208ENST00000496116 NCOR1P1Q9H4R4 102 aa9.21□□□□□ -0.94
CMSS1-208ENST00000496116 VSIRQ9H7M9 311 aa9.21□□□□□ -0.94
CMSS1-208ENST00000496116 A0A1W2PPE2 198 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 A0A1W2PPH5 198 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 ZFP92A6NM28 416 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 FAM90A9PA6NNJ1 464 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 A8MXE2 369 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 MBP02144 154 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 BCL2P10415 239 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 TNFSF4P23510 183 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 ELLP55199 621 aaPredicted RBP9.2□□□□□ -0.94
CMSS1-208ENST00000496116 CENPVQ7Z7K6 275 aaPredicted RBP9.2□□□□□ -0.94
CMSS1-208ENST00000496116 TVP23CQ96ET8 276 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 RCC1LQ96I51 464 aaKnown RBP9.2□□□□□ -0.94
CMSS1-208ENST00000496116 P2RX4Q99571 388 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 IL19Q9UHD0 177 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 A0A087WWC5 75 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 K7EM74 188 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 FCGR3BO75015 233 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 OR2C1O95371 312 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 ARG1P05089 322 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 RAB5AP20339 215 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 BMP5P22003 454 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 TAGLN2P37802 199 aaKnown RBP9.2□□□□□ -0.94
CMSS1-208ENST00000496116 NBL1P41271 181 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 KIR2DS2P43631 304 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 RAB7AP51149 207 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 RPP30P78346 268 aaKnown RBP9.2□□□□□ -0.94
CMSS1-208ENST00000496116 TNFAIP6P98066 277 aaPredicted RBP9.2□□□□□ -0.94
CMSS1-208ENST00000496116 NCR3LG1Q68D85 454 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 SLC35E3Q7Z769 313 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 FAM24BQ8N5W8 94 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 ZDHHC16Q969W1 377 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 RAB39BQ96DA2 213 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 TMUB1Q9BVT8 246 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 SLC39A9Q9NUM3 307 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 CALYQ9NYX4 217 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 RNF7Q9UBF6 113 aa9.2□□□□□ -0.94
CMSS1-208ENST00000496116 MAP1LC3B2A6NCE7 125 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 PMS2P5A8MQ11 134 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 M0R1X1 148 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 ITGB1BP1O14713 200 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 RBFOX2O43251 390 aaKnown RBP eCLIP9.19□□□□□ -0.941e-6■■■■■ 27.4
CMSS1-208ENST00000496116 S100A6P06703 90 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 FBP1P09467 338 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 AKR1D1P51857 326 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 LOXL3P58215 753 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 ERVK-16P61578 105 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 FAM27E3Q08E93 113 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 HABP2Q14520 560 aaPredicted RBP9.19□□□□□ -0.94
CMSS1-208ENST00000496116 ZNF726P1Q15940 193 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 SPRNQ5BIV9 151 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 MRGPRGQ86SM5 289 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 FAM222BQ8WU58 562 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 PLPPR2Q96GM1 343 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 MAP1LC3BQ9GZQ8 125 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 ZNF665Q9H7R5 613 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 C17orf112F2Z3M2 114 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 PRRG2O14669 202 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 IFNA17P01571 189 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 IFNA4P05014 189 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 CD55P08174 381 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 FGF7P21781 194 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 CD40P25942 277 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 FGF8P55075 233 aaPredicted RBP9.19□□□□□ -0.94
CMSS1-208ENST00000496116 LINC00205P59089 165 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 GNB2P62879 340 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 DLK1P80370 383 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 PRAMEF5Q5TYX0 476 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 RBMS3Q6XE24 437 aaKnown RBP9.19□□□□□ -0.94
CMSS1-208ENST00000496116 ZNF709Q8N972 641 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 OR4A16Q8NH70 328 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 S1PR3Q99500 378 aa9.19□□□□□ -0.94
CMSS1-208ENST00000496116 GCM1Q9NP62 436 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms