RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 CALYQ9NYX4 217 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 CACNG5Q9UF02 275 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 RNF150Q9ULK6 438 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 PSG11Q9UQ72 335 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 MMP24Q9Y5R2 645 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 C2CD3Q4AC94 2353 aa5.78□□□□□ -1.48
USP39-219ENST00000496047 NOTCH2Q04721 2471 aa5.77□□□□□ -1.48
USP39-219ENST00000496047 IGKV1D-17A0A075B6S4 117 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 PPIAL4EA0A075B759 164 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 IGHV3OR15-7A0A075B7D8 119 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 TRAV39A0A0B4J263 110 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 A0A1W2PPH5 198 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 FAM90A27PA6NNH2 459 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 FAM90A9PA6NNJ1 464 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 A8MXK9 166 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 B9A039 149 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 PPIAL4DF5H284 164 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 F2RL2O00254 374 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 RAB29O14966 203 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 SIGLEC5O15389 551 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 NDUFA2O43678 99 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 ZNF737O75373 536 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 CLDN14O95500 239 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 CRYZL1O95825 349 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 TSPAN15O95858 294 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 HPRT1P00492 218 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 LHBP01229 141 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 PPIAL4FP0DN26 164 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 APOBEC3AP31941 199 aaPredicted RBP5.77□□□□□ -1.49
USP39-219ENST00000496047 PPP1CCP36873 323 aaKnown RBP5.77□□□□□ -1.49
USP39-219ENST00000496047 THBS3P49746 956 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 SULT1A1P50225 295 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 MEF2CQ06413 473 aaPredicted RBP5.77□□□□□ -1.49
USP39-219ENST00000496047 FBXL19-AS1Q494R0 122 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 PRR30Q53SZ7 412 aaPredicted RBP5.77□□□□□ -1.49
USP39-219ENST00000496047 LRRC10Q5BKY1 277 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 NCMAPQ5T1S8 102 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 AKR1C8PQ5T2L2 129 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 TEX36Q5VZQ5 186 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 STUMQ69YW2 141 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 ADAM5Q6NVV9 412 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 DPPA3Q6W0C5 159 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 Q6ZRG5 221 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 TMEM252Q8N6L7 170 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 DMBX1Q8NFW5 382 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 UBALD1Q8TB05 177 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 SUN5Q8TC36 379 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 GPR146Q96CH1 333 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 SDSLQ96GA7 329 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 S1PR3Q99500 378 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 ATP5SQ99766 215 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 ABHD14AQ9BUJ0 271 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 TREM1Q9NP99 234 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.77□□□□□ -1.49
USP39-219ENST00000496047 PSENENQ9NZ42 101 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 RNF115Q9Y4L5 304 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 PPIAL4AQ9Y536 164 aa5.77□□□□□ -1.49
USP39-219ENST00000496047 LAMA5O15230 3695 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 IGHV3-43A0A0B4J1X8 118 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 BTBD17A6NE02 478 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 DPRXA6NFQ7 191 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 FAM24AA6NFZ4 105 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 RBFOX2O43251 390 aaKnown RBP eCLIP5.76□□□□□ -1.49
USP39-219ENST00000496047 KCNAB3O43448 404 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 NDUFB3O43676 98 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 CYB5R3P00387 301 aaPredicted RBP5.76□□□□□ -1.49
USP39-219ENST00000496047 HBE1P02100 147 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 IGHV3-43DP0DP04 118 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 SPP1P10451 314 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 DAOP14920 347 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 NDUFB7P17568 137 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 IL3RAP26951 378 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 ZNF616Q08AN1 781 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 ZNF816Q0VGE8 651 aaPredicted RBP5.76□□□□□ -1.49
USP39-219ENST00000496047 PJVKQ0ZLH3 352 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 CLINT1Q14677 625 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 ADIPOQQ15848 244 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 ATP6V1FQ16864 119 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 LTC4SQ16873 150 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 CR1LQ2VPA4 569 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 MORN2Q502X0 79 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 PXDC1Q5TGL8 231 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 PRAMEF5Q5TYX0 476 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 ZNF843Q8N446 348 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 TPRX1Q8N7U7 411 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 HSD17B11Q8NBQ5 300 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 OR5C1Q8NGR4 320 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 OR4S2Q8NH73 311 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 CA5BP1Q8WTZ4 195 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 SMIM8Q96KF7 97 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 GAFA1Q96PS6 74 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 REG4Q9BYZ8 158 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 MAGT1Q9H0U3 335 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 ARV1Q9H2C2 271 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 GFOD1Q9NXC2 390 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 IDI2-AS1Q9NZ38 188 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 SLC25A10Q9UBX3 287 aaPredicted RBP5.76□□□□□ -1.49
USP39-219ENST00000496047 GAB2Q9UQC2 676 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 LINC00312Q9Y6C7 94 aa5.76□□□□□ -1.49
USP39-219ENST00000496047 AKAP13Q12802 2813 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms