RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 RANBP3Q9H6Z4 567 aaPredicted RBP13.69□□□□□ -0.22
HDAC6-235ENST00000495515 MOB4Q9Y3A3 225 aa13.69□□□□□ -0.22
HDAC6-235ENST00000495515 WASHC3Q9Y3C0 194 aa13.69□□□□□ -0.22
HDAC6-235ENST00000495515 ATRQ13535 2644 aa13.69□□□□□ -0.22
HDAC6-235ENST00000495515 ANKRD20A5PA0PJZ0 165 aa13.68□□□□□ -0.22
HDAC6-235ENST00000495515 DISC1C4P0D8 188 aa13.68□□□□□ -0.22
HDAC6-235ENST00000495515 H0YJW9 148 aa13.68□□□□□ -0.22
HDAC6-235ENST00000495515 CHST1O43916 411 aa13.68□□□□□ -0.22
HDAC6-235ENST00000495515 NDUFA7O95182 113 aa13.68□□□□□ -0.22
HDAC6-235ENST00000495515 RRASP10301 218 aa13.68□□□□□ -0.22
HDAC6-235ENST00000495515 FOXL1Q12952 345 aa13.68□□□□□ -0.22
HDAC6-235ENST00000495515 RTL8BQ17RB0 113 aa13.68□□□□□ -0.22
HDAC6-235ENST00000495515 GLDNQ6ZMI3 551 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-235ENST00000495515 PDPNQ86YL7 162 aa13.68□□□□□ -0.22
HDAC6-235ENST00000495515 TINAGL1Q9GZM7 467 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-235ENST00000495515 CCL28Q9NRJ3 127 aa13.68□□□□□ -0.22
HDAC6-235ENST00000495515 PRELID3BQ9Y3B1 194 aa13.68□□□□□ -0.22
HDAC6-235ENST00000495515 FGF16O43320 207 aa13.67□□□□□ -0.22
HDAC6-235ENST00000495515 AMY2AP04746 511 aa13.67□□□□□ -0.22
HDAC6-235ENST00000495515 S100GP29377 79 aa13.67□□□□□ -0.22
HDAC6-235ENST00000495515 DUTP33316 252 aaKnown RBP13.67□□□□□ -0.22
HDAC6-235ENST00000495515 FAUP35544 74 aaKnown RBP13.67□□□□□ -0.22
HDAC6-235ENST00000495515 INPP1P49441 399 aa13.67□□□□□ -0.22
HDAC6-235ENST00000495515 RAG2P55895 527 aa13.67□□□□□ -0.22
HDAC6-235ENST00000495515 ZNF66Q6ZN08 573 aa13.67□□□□□ -0.22
HDAC6-235ENST00000495515 CMTM1Q8IZ96 169 aa13.67□□□□□ -0.22
HDAC6-235ENST00000495515 TOMM5Q8N4H5 51 aa13.67□□□□□ -0.22
HDAC6-235ENST00000495515 ZNF383Q8NA42 475 aa13.67□□□□□ -0.22
HDAC6-235ENST00000495515 DEDD2Q8WXF8 326 aa13.67□□□□□ -0.22
HDAC6-235ENST00000495515 S100ZQ8WXG8 99 aa13.67□□□□□ -0.22
HDAC6-235ENST00000495515 RNF5Q99942 180 aa13.67□□□□□ -0.22
HDAC6-235ENST00000495515 PRSS22Q9GZN4 317 aa13.67□□□□□ -0.22
HDAC6-235ENST00000495515 SRRQ9GZT4 340 aa13.67□□□□□ -0.22
HDAC6-235ENST00000495515 SLC35D1Q9NTN3 355 aa13.67□□□□□ -0.22
HDAC6-235ENST00000495515 A0A1B0GUS0 222 aa13.66□□□□□ -0.22
HDAC6-235ENST00000495515 NCBP2LA6PVI3 153 aaKnown RBP13.66□□□□□ -0.22
HDAC6-235ENST00000495515 TSPAN9O75954 239 aa13.66□□□□□ -0.22
HDAC6-235ENST00000495515 UCP3P55916 312 aa13.66□□□□□ -0.22
HDAC6-235ENST00000495515 CATR1Q13166 79 aa13.66□□□□□ -0.22
HDAC6-235ENST00000495515 TRIQKQ629K1 86 aa13.66□□□□□ -0.22
HDAC6-235ENST00000495515 KCTD9Q7L273 389 aa13.66□□□□□ -0.22
HDAC6-235ENST00000495515 Q8N6K4 173 aa13.66□□□□□ -0.22
HDAC6-235ENST00000495515 FLYWCH2Q96CP2 140 aaKnown RBP13.66□□□□□ -0.22
HDAC6-235ENST00000495515 C5orf30Q96GV9 206 aa13.66□□□□□ -0.22
HDAC6-235ENST00000495515 BEX1Q9HBH7 125 aa13.66□□□□□ -0.22
HDAC6-235ENST00000495515 TMEM89A2RUT3 159 aa13.65□□□□□ -0.22
HDAC6-235ENST00000495515 IGLV2-14P01704 120 aa13.65□□□□□ -0.22
HDAC6-235ENST00000495515 GNRHRP30968 328 aa13.65□□□□□ -0.22
HDAC6-235ENST00000495515 ECI1P42126 302 aa13.65□□□□□ -0.22
HDAC6-235ENST00000495515 MMDQ15546 238 aa13.65□□□□□ -0.22
HDAC6-235ENST00000495515 SCGB2B2Q4G0G5 96 aa13.65□□□□□ -0.22
HDAC6-235ENST00000495515 SLC38A6Q8IZM9 456 aa13.65□□□□□ -0.22
HDAC6-235ENST00000495515 OR2T6Q8NHC8 308 aa13.65□□□□□ -0.22
HDAC6-235ENST00000495515 TERB2Q8NHR7 220 aa13.65□□□□□ -0.22
HDAC6-235ENST00000495515 TRIM63Q969Q1 353 aa13.65□□□□□ -0.22
HDAC6-235ENST00000495515 PRRT1Q99946 306 aa13.65□□□□□ -0.22
HDAC6-235ENST00000495515 FXYD6Q9H0Q3 95 aa13.65□□□□□ -0.22
HDAC6-235ENST00000495515 KIAA1456Q9P272 454 aa13.65□□□□□ -0.22
HDAC6-235ENST00000495515 CUBNO60494 3623 aa13.64□□□□□ -0.23
HDAC6-235ENST00000495515 GPR31O00270 319 aa13.64□□□□□ -0.23
HDAC6-235ENST00000495515 KIR2DS2P43631 304 aa13.64□□□□□ -0.23
HDAC6-235ENST00000495515 RPS16P62249 146 aaKnown RBP13.64□□□□□ -0.23
HDAC6-235ENST00000495515 ARSJQ5FYB0 599 aaPredicted RBP13.64□□□□□ -0.23
HDAC6-235ENST00000495515 ZNF57Q68EA5 555 aaPredicted RBP13.64□□□□□ -0.23
HDAC6-235ENST00000495515 C11orf88Q6PI97 169 aa13.64□□□□□ -0.23
HDAC6-235ENST00000495515 ZNF818PQ6ZRF7 136 aa13.64□□□□□ -0.23
HDAC6-235ENST00000495515 Q6ZSV7 163 aa13.64□□□□□ -0.23
HDAC6-235ENST00000495515 LHFPL1Q86WI0 220 aa13.64□□□□□ -0.23
HDAC6-235ENST00000495515 MFSD4AQ8N468 514 aa13.64□□□□□ -0.23
HDAC6-235ENST00000495515 POC5Q8NA72 575 aa13.64□□□□□ -0.23
HDAC6-235ENST00000495515 BVESQ8NE79 360 aa13.64□□□□□ -0.23
HDAC6-235ENST00000495515 OR4D10Q8NGI6 311 aa13.64□□□□□ -0.23
HDAC6-235ENST00000495515 OR4C16Q8NGL9 310 aa13.64□□□□□ -0.23
HDAC6-235ENST00000495515 SPATA3Q8NHX4 192 aa13.64□□□□□ -0.23
HDAC6-235ENST00000495515 TCTEX1D2Q8WW35 142 aa13.64□□□□□ -0.23
HDAC6-235ENST00000495515 TSNAXQ99598 290 aaKnown RBP13.64□□□□□ -0.23
HDAC6-235ENST00000495515 RASL11BQ9BPW5 248 aa13.64□□□□□ -0.23
HDAC6-235ENST00000495515 C16orf95Q9H693 158 aa13.64□□□□□ -0.23
HDAC6-235ENST00000495515 MCUBQ9NWR8 336 aa13.64□□□□□ -0.23
HDAC6-235ENST00000495515 SCP2D1Q9UJQ7 156 aa13.64□□□□□ -0.23
HDAC6-235ENST00000495515 LINC00473A8K010 186 aa13.63□□□□□ -0.23
HDAC6-235ENST00000495515 NBR2O15453 112 aa13.63□□□□□ -0.23
HDAC6-235ENST00000495515 PGAM2P15259 253 aa13.63□□□□□ -0.23
HDAC6-235ENST00000495515 LGALS7P47929 136 aa13.63□□□□□ -0.23
HDAC6-235ENST00000495515 LINC00205P59089 165 aa13.63□□□□□ -0.23
HDAC6-235ENST00000495515 RELBQ01201 579 aa13.63□□□□□ -0.23
HDAC6-235ENST00000495515 KLF9Q13886 244 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-235ENST00000495515 FBLN7Q53RD9 439 aa13.63□□□□□ -0.23
HDAC6-235ENST00000495515 AADACL3Q5VUY0 350 aa13.63□□□□□ -0.23
HDAC6-235ENST00000495515 C5orf56Q8N8D9 126 aa13.63□□□□□ -0.23
HDAC6-235ENST00000495515 ZFAND1Q8TCF1 268 aa13.63□□□□□ -0.23
HDAC6-235ENST00000495515 DDB2Q92466 427 aa13.63□□□□□ -0.23
HDAC6-235ENST00000495515 ZNF486Q96H40 463 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-235ENST00000495515 AKIP1Q9NQ31 210 aa13.63□□□□□ -0.23
HDAC6-235ENST00000495515 LIN7CQ9NUP9 197 aaKnown RBP13.63□□□□□ -0.23
HDAC6-235ENST00000495515 MMP24Q9Y5R2 645 aa13.63□□□□□ -0.23
HDAC6-235ENST00000495515 CLPSL1A2RUU4 121 aa13.62□□□□□ -0.23
HDAC6-235ENST00000495515 TNFSF12O43508 249 aa13.62□□□□□ -0.23
HDAC6-235ENST00000495515 FCGR3BO75015 233 aa13.62□□□□□ -0.23
HDAC6-235ENST00000495515 SPDEFO95238 335 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms