RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 OR1A1Q9P1Q5 309 aa10.8□□□□□ -0.68
VARS-228ENST00000495010 OR11H12B2RN74 326 aa10.79□□□□□ -0.68
VARS-228ENST00000495010 M0R1X1 148 aa10.79□□□□□ -0.68
VARS-228ENST00000495010 BRI3O95415 125 aa10.79□□□□□ -0.68
VARS-228ENST00000495010 HTR2CP28335 458 aa10.79□□□□□ -0.68
VARS-228ENST00000495010 HLA-DRB3P79483 266 aa10.79□□□□□ -0.68
VARS-228ENST00000495010 PJVKQ0ZLH3 352 aa10.79□□□□□ -0.68
VARS-228ENST00000495010 GUCA2BQ16661 112 aa10.79□□□□□ -0.68
VARS-228ENST00000495010 CD300EQ496F6 205 aaPredicted RBP10.79□□□□□ -0.68
VARS-228ENST00000495010 GLT8D1Q68CQ7 371 aa10.79□□□□□ -0.68
VARS-228ENST00000495010 C10orf67Q8IYJ2 551 aa10.79□□□□□ -0.68
VARS-228ENST00000495010 LINC00476Q8WZB0 136 aa10.79□□□□□ -0.68
VARS-228ENST00000495010 RBMY1BA6NDE4 496 aaKnown RBP10.78□□□□□ -0.68
VARS-228ENST00000495010 RBMY1EA6NEQ0 496 aaKnown RBP10.78□□□□□ -0.68
VARS-228ENST00000495010 MPPED1O15442 326 aa10.78□□□□□ -0.68
VARS-228ENST00000495010 CD7P09564 240 aa10.78□□□□□ -0.68
VARS-228ENST00000495010 RBMY1DP0C7P1 496 aaKnown RBP10.78□□□□□ -0.68
VARS-228ENST00000495010 APELAP0DMC3 54 aa10.78□□□□□ -0.68
VARS-228ENST00000495010 CELP19835 753 aa10.78□□□□□ -0.68
VARS-228ENST00000495010 MECP2P51608 486 aaKnown RBP10.78□□□□□ -0.68
VARS-228ENST00000495010 LINC00205P59089 165 aa10.78□□□□□ -0.68
VARS-228ENST00000495010 PTX4Q96A99 478 aa10.78□□□□□ -0.68
VARS-228ENST00000495010 HARBI1Q96MB7 349 aa10.78□□□□□ -0.68
VARS-228ENST00000495010 NICN1Q9BSH3 213 aa10.78□□□□□ -0.68
VARS-228ENST00000495010 TRBV6-6A0A0A6YYG2 114 aa10.77□□□□□ -0.69
VARS-228ENST00000495010 SHOXO15266 292 aa10.77□□□□□ -0.69
VARS-228ENST00000495010 PROP1O75360 226 aa10.77□□□□□ -0.69
VARS-228ENST00000495010 TUSC2O75896 110 aa10.77□□□□□ -0.69
VARS-228ENST00000495010 SCTP09683 121 aa10.77□□□□□ -0.69
VARS-228ENST00000495010 ATP5G2Q06055 141 aa10.77□□□□□ -0.69
VARS-228ENST00000495010 TTC23Q5W5X9 447 aa10.77□□□□□ -0.69
VARS-228ENST00000495010 GGHQ92820 318 aa10.77□□□□□ -0.69
VARS-228ENST00000495010 TM2D1Q9BX74 207 aa10.77□□□□□ -0.69
VARS-228ENST00000495010 SMPD3Q9NY59 655 aaPredicted RBP10.77□□□□□ -0.69
VARS-228ENST00000495010 AK3Q9UIJ7 227 aa10.77□□□□□ -0.69
VARS-228ENST00000495010 HYDINQ4G0P3 5121 aa10.76□□□□□ -0.69
VARS-228ENST00000495010 CXorf65A6NEN9 183 aa10.76□□□□□ -0.69
VARS-228ENST00000495010 MSGN1A6NI15 193 aa10.76□□□□□ -0.69
VARS-228ENST00000495010 ZNF785A8K8V0 405 aa10.76□□□□□ -0.69
VARS-228ENST00000495010 MYL12BO14950 172 aa10.76□□□□□ -0.69
VARS-228ENST00000495010 IGLV2-23P01705 113 aa10.76□□□□□ -0.69
VARS-228ENST00000495010 CD1AP06126 327 aa10.76□□□□□ -0.69
VARS-228ENST00000495010 OR9G9P0C7N8 305 aa10.76□□□□□ -0.69
VARS-228ENST00000495010 SSBP2P81877 361 aaPredicted RBP10.76□□□□□ -0.69
VARS-228ENST00000495010 ST3GAL4Q11206 333 aa10.76□□□□□ -0.69
VARS-228ENST00000495010 EXOSC2Q13868 293 aaKnown RBP10.76□□□□□ -0.69
VARS-228ENST00000495010 TNXAQ16473 311 aa10.76□□□□□ -0.69
VARS-228ENST00000495010 RTL8BQ17RB0 113 aa10.76□□□□□ -0.69
VARS-228ENST00000495010 RBM48Q5RL73 367 aaKnown RBP10.76□□□□□ -0.69
VARS-228ENST00000495010 SLC16A13Q7RTY0 426 aa10.76□□□□□ -0.69
VARS-228ENST00000495010 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.76□□□□□ -0.69
VARS-228ENST00000495010 ZNF485Q8NCK3 441 aa10.76□□□□□ -0.69
VARS-228ENST00000495010 HDHD3Q9BSH5 251 aaPredicted RBP10.76□□□□□ -0.69
VARS-228ENST00000495010 URM1Q9BTM9 101 aaKnown RBP10.76□□□□□ -0.69
VARS-228ENST00000495010 ST6GALNAC5Q9BVH7 336 aa10.76□□□□□ -0.69
VARS-228ENST00000495010 WFDC10AQ9H1F0 79 aa10.76□□□□□ -0.69
VARS-228ENST00000495010 RDH8Q9NYR8 311 aa10.76□□□□□ -0.69
VARS-228ENST00000495010 EFCAB10A6NFE3 127 aa10.75□□□□□ -0.69
VARS-228ENST00000495010 FAM223BA6NKX1 122 aa10.75□□□□□ -0.69
VARS-228ENST00000495010 BMPR1BO00238 502 aa10.75□□□□□ -0.69
VARS-228ENST00000495010 BPNT1O95861 308 aa10.75□□□□□ -0.69
VARS-228ENST00000495010 CRYGBP07316 175 aa10.75□□□□□ -0.69
VARS-228ENST00000495010 RHOGP84095 191 aa10.75□□□□□ -0.69
VARS-228ENST00000495010 TAGLNQ01995 201 aaKnown RBP10.75□□□□□ -0.69
VARS-228ENST00000495010 UNC119Q13432 240 aa10.75□□□□□ -0.69
VARS-228ENST00000495010 PMS2P11Q13670 270 aa10.75□□□□□ -0.69
VARS-228ENST00000495010 DEFB114Q30KQ6 69 aa10.75□□□□□ -0.69
VARS-228ENST00000495010 VMA21Q3ZAQ7 101 aa10.75□□□□□ -0.69
VARS-228ENST00000495010 C1orf100Q5SVJ3 147 aa10.75□□□□□ -0.69
VARS-228ENST00000495010 FAM223AQ8IWN6 122 aa10.75□□□□□ -0.69
VARS-228ENST00000495010 ADAD2Q8NCV1 583 aaKnown RBP10.75□□□□□ -0.69
VARS-228ENST00000495010 DDB2Q92466 427 aa10.75□□□□□ -0.69
VARS-228ENST00000495010 KCTD12Q96CX2 325 aaKnown RBP10.75□□□□□ -0.69
VARS-228ENST00000495010 KCNK15Q9H427 330 aa10.75□□□□□ -0.69
VARS-228ENST00000495010 Q9N2K0 584 aa10.75□□□□□ -0.69
VARS-228ENST00000495010 C12orf4Q9NQ89 552 aa10.75□□□□□ -0.69
VARS-228ENST00000495010 TECRQ9NZ01 308 aaKnown RBP10.75□□□□□ -0.69
VARS-228ENST00000495010 NUPR2A6NF83 97 aa10.74□□□□□ -0.69
VARS-228ENST00000495010 SOCS1O15524 211 aa10.74□□□□□ -0.69
VARS-228ENST00000495010 RRASP10301 218 aa10.74□□□□□ -0.69
VARS-228ENST00000495010 SRMP19623 302 aa10.74□□□□□ -0.69
VARS-228ENST00000495010 WNT4P56705 351 aa10.74□□□□□ -0.69
VARS-228ENST00000495010 MRPS15P82914 257 aaKnown RBP10.74□□□□□ -0.69
VARS-228ENST00000495010 ACSM3Q53FZ2 586 aa10.74□□□□□ -0.69
VARS-228ENST00000495010 FAM209BQ5JX69 171 aa10.74□□□□□ -0.69
VARS-228ENST00000495010 SETD9Q8NE22 299 aa10.74□□□□□ -0.69
VARS-228ENST00000495010 CYGBQ8WWM9 190 aa10.74□□□□□ -0.69
VARS-228ENST00000495010 ACOT12Q8WYK0 555 aa10.74□□□□□ -0.69
VARS-228ENST00000495010 CMSS1Q9BQ75 279 aaKnown RBP10.74□□□□□ -0.69
VARS-228ENST00000495010 OR2D2Q9H210 308 aa10.74□□□□□ -0.69
VARS-228ENST00000495010 AKIP1Q9NQ31 210 aa10.74□□□□□ -0.69
VARS-228ENST00000495010 FAM53CQ9NYF3 392 aa10.74□□□□□ -0.69
VARS-228ENST00000495010 RBM7Q9Y580 266 aaKnown RBP10.74□□□□□ -0.69
VARS-228ENST00000495010 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.73□□□□□ -0.69
VARS-228ENST00000495010 A0A0A6YYD4 124 aa10.73□□□□□ -0.69
VARS-228ENST00000495010 TMEM14DPA8MWL7 114 aa10.73□□□□□ -0.69
VARS-228ENST00000495010 TRDCB7Z8K6 153 aa10.73□□□□□ -0.69
VARS-228ENST00000495010 ACTL6BO94805 426 aa10.73□□□□□ -0.69
VARS-228ENST00000495010 PRH1P02810 166 aa10.73□□□□□ -0.69
VARS-228ENST00000495010 FOLR2P14207 255 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms