RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 TM2D3Q9BRN9 247 aa16.93■□□□□ 0.3
HDDC3-203ENST00000494993 RSRP1Q9BUV0 290 aa16.93■□□□□ 0.3
HDDC3-203ENST00000494993 PECRQ9BY49 303 aa16.93■□□□□ 0.3
HDDC3-203ENST00000494993 RANGRFQ9HD47 186 aaPredicted RBP16.93■□□□□ 0.3
HDDC3-203ENST00000494993 RDH8Q9NYR8 311 aa16.93■□□□□ 0.3
HDDC3-203ENST00000494993 IGHV4-30-4P0DP06 118 aa16.92■□□□□ 0.3
HDDC3-203ENST00000494993 ZP3P21754 424 aa16.92■□□□□ 0.3
HDDC3-203ENST00000494993 VEGFCP49767 419 aa16.92■□□□□ 0.3
HDDC3-203ENST00000494993 IRF3Q14653 427 aa16.92■□□□□ 0.3
HDDC3-203ENST00000494993 TMEM91Q6ZNR0 172 aa16.92■□□□□ 0.3
HDDC3-203ENST00000494993 ANKRD13BQ86YJ7 626 aa16.92■□□□□ 0.3
HDDC3-203ENST00000494993 Q8N1Y9 231 aa16.92■□□□□ 0.3
HDDC3-203ENST00000494993 SLC35D1Q9NTN3 355 aa16.92■□□□□ 0.3
HDDC3-203ENST00000494993 AK6Q9Y3D8 172 aaKnown RBP16.92■□□□□ 0.3
HDDC3-203ENST00000494993 STARD9Q9P2P6 4700 aa16.92■□□□□ 0.3
HDDC3-203ENST00000494993 CSMD3Q7Z407 3707 aa16.92■□□□□ 0.3
HDDC3-203ENST00000494993 C13orf42A0A1B0GVH6 325 aa16.91■□□□□ 0.3
HDDC3-203ENST00000494993 TRDCB7Z8K6 153 aa16.91■□□□□ 0.3
HDDC3-203ENST00000494993 M0R1X1 148 aa16.91■□□□□ 0.3
HDDC3-203ENST00000494993 LDLRAD4O15165 306 aa16.91■□□□□ 0.3
HDDC3-203ENST00000494993 SSBP2P81877 361 aaPredicted RBP16.91■□□□□ 0.3
HDDC3-203ENST00000494993 RAB11BQ15907 218 aa16.91■□□□□ 0.3
HDDC3-203ENST00000494993 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.91■□□□□ 0.3
HDDC3-203ENST00000494993 OR5T1Q8NG75 326 aa16.91■□□□□ 0.3
HDDC3-203ENST00000494993 VCXQ9H320 206 aa16.91■□□□□ 0.3
HDDC3-203ENST00000494993 PALMDQ9NP74 551 aa16.91■□□□□ 0.3
HDDC3-203ENST00000494993 SCN3BQ9NY72 215 aa16.91■□□□□ 0.3
HDDC3-203ENST00000494993 A0A0G2JLM5 398 aa16.9■□□□□ 0.3
HDDC3-203ENST00000494993 A8MZ25 164 aa16.9■□□□□ 0.3
HDDC3-203ENST00000494993 CNIH1O95406 144 aa16.9■□□□□ 0.3
HDDC3-203ENST00000494993 MOGAT2Q3SYC2 334 aa16.9■□□□□ 0.3
HDDC3-203ENST00000494993 PLAC9Q5JTB6 97 aa16.9■□□□□ 0.3
HDDC3-203ENST00000494993 SGPP2Q8IWX5 399 aa16.9■□□□□ 0.3
HDDC3-203ENST00000494993 OR56B1Q8NGI3 324 aa16.9■□□□□ 0.3
HDDC3-203ENST00000494993 C19orf73Q9NVV2 129 aa16.9■□□□□ 0.3
HDDC3-203ENST00000494993 ANKRD34BA5PLL1 514 aa16.89■□□□□ 0.29
HDDC3-203ENST00000494993 ARL6IP5O75915 188 aa16.89■□□□□ 0.29
HDDC3-203ENST00000494993 IGLV2-23P01705 113 aa16.89■□□□□ 0.29
HDDC3-203ENST00000494993 SERPINB10P48595 397 aa16.89■□□□□ 0.29
HDDC3-203ENST00000494993 CLDN12P56749 244 aa16.89■□□□□ 0.29
HDDC3-203ENST00000494993 RPS25P62851 125 aaKnown RBP16.89■□□□□ 0.29
HDDC3-203ENST00000494993 PJVKQ0ZLH3 352 aa16.89■□□□□ 0.29
HDDC3-203ENST00000494993 TPBGQ13641 420 aa16.89■□□□□ 0.29
HDDC3-203ENST00000494993 OR4A4PQ8NGN8 299 aa16.89■□□□□ 0.29
HDDC3-203ENST00000494993 CRYGBP07316 175 aa16.88■□□□□ 0.29
HDDC3-203ENST00000494993 LGALS7P47929 136 aa16.88■□□□□ 0.29
HDDC3-203ENST00000494993 KLF5Q13887 457 aaPredicted RBP16.88■□□□□ 0.29
HDDC3-203ENST00000494993 TRAM1Q15629 374 aa16.88■□□□□ 0.29
HDDC3-203ENST00000494993 FAM3DQ96BQ1 224 aa16.88■□□□□ 0.29
HDDC3-203ENST00000494993 HARBI1Q96MB7 349 aa16.88■□□□□ 0.29
HDDC3-203ENST00000494993 TMEM68Q96MH6 324 aa16.88■□□□□ 0.29
HDDC3-203ENST00000494993 OR2D2Q9H210 308 aa16.88■□□□□ 0.29
HDDC3-203ENST00000494993 FABP7O15540 132 aa16.87■□□□□ 0.29
HDDC3-203ENST00000494993 BRI3O95415 125 aa16.87■□□□□ 0.29
HDDC3-203ENST00000494993 HSMCR30P0CW71 290 aa16.87■□□□□ 0.29
HDDC3-203ENST00000494993 C2orf76Q3KRA6 126 aa16.87■□□□□ 0.29
HDDC3-203ENST00000494993 OR9G4Q8NGQ1 327 aa16.87■□□□□ 0.29
HDDC3-203ENST00000494993 CABLES2Q9BTV7 478 aa16.87■□□□□ 0.29
HDDC3-203ENST00000494993 SDHAF2Q9NX18 166 aa16.87■□□□□ 0.29
HDDC3-203ENST00000494993 BET1O15155 118 aa16.86■□□□□ 0.29
HDDC3-203ENST00000494993 DENRO43583 198 aaKnown RBP16.86■□□□□ 0.29
HDDC3-203ENST00000494993 CD3GP09693 182 aa16.86■□□□□ 0.29
HDDC3-203ENST00000494993 PSMA1P25786 263 aaKnown RBP16.86■□□□□ 0.29
HDDC3-203ENST00000494993 CALRP27797 417 aaKnown RBP16.86■□□□□ 0.29
HDDC3-203ENST00000494993 DEFA5Q01523 94 aa16.86■□□□□ 0.29
HDDC3-203ENST00000494993 IL34Q6ZMJ4 242 aa16.86■□□□□ 0.29
HDDC3-203ENST00000494993 TINAGL1Q9GZM7 467 aaPredicted RBP16.86■□□□□ 0.29
HDDC3-203ENST00000494993 EDA2RQ9HAV5 297 aa16.86■□□□□ 0.29
HDDC3-203ENST00000494993 H0Y980 276 aa16.85■□□□□ 0.29
HDDC3-203ENST00000494993 AADACP22760 399 aa16.85■□□□□ 0.29
HDDC3-203ENST00000494993 RANBP1P43487 201 aa16.85■□□□□ 0.29
HDDC3-203ENST00000494993 SYNJ2BPP57105 145 aa16.85■□□□□ 0.29
HDDC3-203ENST00000494993 MRPS15P82914 257 aaKnown RBP16.85■□□□□ 0.29
HDDC3-203ENST00000494993 PLA2G7Q13093 441 aa16.85■□□□□ 0.29
HDDC3-203ENST00000494993 CBX3Q13185 183 aa16.85■□□□□ 0.29
HDDC3-203ENST00000494993 TMEM177Q53S58 311 aa16.85■□□□□ 0.29
HDDC3-203ENST00000494993 IGSF11Q5DX21 431 aa16.85■□□□□ 0.29
HDDC3-203ENST00000494993 ZFAND6Q6FIF0 208 aa16.85■□□□□ 0.29
HDDC3-203ENST00000494993 ISOC1Q96CN7 298 aa16.85■□□□□ 0.29
HDDC3-203ENST00000494993 C5orf30Q96GV9 206 aa16.85■□□□□ 0.29
HDDC3-203ENST00000494993 GAR1Q9NY12 217 aaKnown RBP16.85■□□□□ 0.29
HDDC3-203ENST00000494993 PEF1Q9UBV8 284 aaKnown RBP16.85■□□□□ 0.29
HDDC3-203ENST00000494993 KCNK7Q9Y2U2 307 aa16.85■□□□□ 0.29
HDDC3-203ENST00000494993 TPRKBQ9Y3C4 175 aa16.85■□□□□ 0.29
HDDC3-203ENST00000494993 V9GY05 133 aa16.85■□□□□ 0.29
HDDC3-203ENST00000494993 TRBV6-7A0A0A0MS04 114 aa16.84■□□□□ 0.29
HDDC3-203ENST00000494993 LCE6AA0A183 80 aa16.84■□□□□ 0.29
HDDC3-203ENST00000494993 TMEM272A0A1B0GTI8 110 aa16.84■□□□□ 0.29
HDDC3-203ENST00000494993 SHOXO15266 292 aa16.84■□□□□ 0.29
HDDC3-203ENST00000494993 FCGR3AP08637 254 aa16.84■□□□□ 0.29
HDDC3-203ENST00000494993 GSTT2P0CG29 244 aa16.84■□□□□ 0.29
HDDC3-203ENST00000494993 GSTT2BP0CG30 244 aa16.84■□□□□ 0.29
HDDC3-203ENST00000494993 FABP5Q01469 135 aa16.84■□□□□ 0.29
HDDC3-203ENST00000494993 TAGLNQ01995 201 aaKnown RBP16.84■□□□□ 0.29
HDDC3-203ENST00000494993 MLLT11Q13015 90 aaPredicted RBP16.84■□□□□ 0.29
HDDC3-203ENST00000494993 ZNF343Q6P1L6 599 aa16.84■□□□□ 0.29
HDDC3-203ENST00000494993 BVESQ8NE79 360 aa16.84■□□□□ 0.29
HDDC3-203ENST00000494993 OR10J5Q8NHC4 309 aa16.84■□□□□ 0.29
HDDC3-203ENST00000494993 DUSP21Q9H596 190 aa16.84■□□□□ 0.29
HDDC3-203ENST00000494993 RAB22AQ9UL26 194 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms