RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 FBXO24O75426 580 aa12.85□□□□□ -0.35
YIF1A-209ENST00000494836 NDUFA3O95167 84 aa12.85□□□□□ -0.35
YIF1A-209ENST00000494836 PMP2P02689 132 aa12.85□□□□□ -0.35
YIF1A-209ENST00000494836 IGKV1-16P04430 117 aa12.85□□□□□ -0.35
YIF1A-209ENST00000494836 HLA-DMAP28067 261 aa12.85□□□□□ -0.35
YIF1A-209ENST00000494836 DUTP33316 252 aaKnown RBP12.85□□□□□ -0.35
YIF1A-209ENST00000494836 RFX2P48378 723 aa12.85□□□□□ -0.35
YIF1A-209ENST00000494836 CBX3Q13185 183 aa12.85□□□□□ -0.35
YIF1A-209ENST00000494836 RTL8BQ17RB0 113 aa12.85□□□□□ -0.35
YIF1A-209ENST00000494836 C5orf64Q2M2E5 130 aa12.85□□□□□ -0.35
YIF1A-209ENST00000494836 RNASE12Q5GAN4 147 aaKnown RBP12.85□□□□□ -0.35
YIF1A-209ENST00000494836 OVCH2Q7RTZ1 564 aa12.85□□□□□ -0.35
YIF1A-209ENST00000494836 CENPVQ7Z7K6 275 aaPredicted RBP12.85□□□□□ -0.35
YIF1A-209ENST00000494836 FOXRED2Q8IWF2 684 aa12.85□□□□□ -0.35
YIF1A-209ENST00000494836 WIPF2Q8TF74 440 aaPredicted RBP12.85□□□□□ -0.35
YIF1A-209ENST00000494836 SECTM1Q8WVN6 248 aa12.85□□□□□ -0.35
YIF1A-209ENST00000494836 GIMAP1Q8WWP7 306 aa12.85□□□□□ -0.35
YIF1A-209ENST00000494836 DIRAS2Q96HU8 199 aa12.85□□□□□ -0.35
YIF1A-209ENST00000494836 ABHD1Q96SE0 405 aa12.85□□□□□ -0.35
YIF1A-209ENST00000494836 DCUN1D5Q9BTE7 237 aa12.85□□□□□ -0.35
YIF1A-209ENST00000494836 RBMX2Q9Y388 322 aaKnown RBP12.85□□□□□ -0.35
YIF1A-209ENST00000494836 AP4M1O00189 453 aa12.84□□□□□ -0.35
YIF1A-209ENST00000494836 HRH1P35367 487 aa12.84□□□□□ -0.35
YIF1A-209ENST00000494836 FXYD4P59646 89 aa12.84□□□□□ -0.35
YIF1A-209ENST00000494836 HERV-K104P61576 105 aa12.84□□□□□ -0.35
YIF1A-209ENST00000494836 RPS16P62249 146 aaKnown RBP12.84□□□□□ -0.35
YIF1A-209ENST00000494836 DYRK1AQ13627 763 aa12.84□□□□□ -0.35
YIF1A-209ENST00000494836 PLGLAQ15195 96 aa12.84□□□□□ -0.35
YIF1A-209ENST00000494836 LYSMD2Q8IV50 215 aa12.84□□□□□ -0.35
YIF1A-209ENST00000494836 OR5AU1Q8NGC0 362 aa12.84□□□□□ -0.35
YIF1A-209ENST00000494836 FLYWCH2Q96CP2 140 aaKnown RBP12.84□□□□□ -0.35
YIF1A-209ENST00000494836 TSNAXQ99598 290 aaKnown RBP12.84□□□□□ -0.35
YIF1A-209ENST00000494836 NXF2Q9GZY0 626 aaKnown RBP12.84□□□□□ -0.35
YIF1A-209ENST00000494836 ZNF107Q9UII5 783 aaPredicted RBP12.84□□□□□ -0.35
YIF1A-209ENST00000494836 TRRAPQ9Y4A5 3859 aa12.84□□□□□ -0.35
YIF1A-209ENST00000494836 LINC00473A8K010 186 aa12.83□□□□□ -0.36
YIF1A-209ENST00000494836 M0QZ24 198 aa12.83□□□□□ -0.36
YIF1A-209ENST00000494836 RRHO14718 337 aa12.83□□□□□ -0.36
YIF1A-209ENST00000494836 SPDEFO95238 335 aa12.83□□□□□ -0.36
YIF1A-209ENST00000494836 IGLV2-14P01704 120 aa12.83□□□□□ -0.36
YIF1A-209ENST00000494836 HLA-DRB1P01911 266 aa12.83□□□□□ -0.36
YIF1A-209ENST00000494836 RRASP10301 218 aa12.83□□□□□ -0.36
YIF1A-209ENST00000494836 CD28P10747 220 aa12.83□□□□□ -0.36
YIF1A-209ENST00000494836 MSMO1Q15800 293 aa12.83□□□□□ -0.36
YIF1A-209ENST00000494836 KCTD9Q7L273 389 aa12.83□□□□□ -0.36
YIF1A-209ENST00000494836 TMEM17Q86X19 198 aa12.83□□□□□ -0.36
YIF1A-209ENST00000494836 BVESQ8NE79 360 aa12.83□□□□□ -0.36
YIF1A-209ENST00000494836 OR52I2Q8NH67 350 aa12.83□□□□□ -0.36
YIF1A-209ENST00000494836 CHPT1Q8WUD6 406 aa12.83□□□□□ -0.36
YIF1A-209ENST00000494836 FCAMRQ8WWV6 532 aa12.83□□□□□ -0.36
YIF1A-209ENST00000494836 DDB2Q92466 427 aa12.83□□□□□ -0.36
YIF1A-209ENST00000494836 NOL4LQ96MY1 436 aaPredicted RBP12.83□□□□□ -0.36
YIF1A-209ENST00000494836 HSPB9Q9BQS6 159 aa12.83□□□□□ -0.36
YIF1A-209ENST00000494836 SLC5A7Q9GZV3 580 aa12.83□□□□□ -0.36
YIF1A-209ENST00000494836 FBXL15Q9H469 300 aa12.83□□□□□ -0.36
YIF1A-209ENST00000494836 RABL2AQ9UBK7 228 aaPredicted RBP12.83□□□□□ -0.36
YIF1A-209ENST00000494836 RABL2BQ9UNT1 228 aa12.83□□□□□ -0.36
YIF1A-209ENST00000494836 PSMB11A5LHX3 300 aa12.82□□□□□ -0.36
YIF1A-209ENST00000494836 LINC01548A6NM66 108 aa12.82□□□□□ -0.36
YIF1A-209ENST00000494836 MRPS10P82664 201 aaKnown RBP12.82□□□□□ -0.36
YIF1A-209ENST00000494836 IL18Q14116 193 aa12.82□□□□□ -0.36
YIF1A-209ENST00000494836 PSG5Q15238 335 aa12.82□□□□□ -0.36
YIF1A-209ENST00000494836 ACTBL2Q562R1 376 aa12.82□□□□□ -0.36
YIF1A-209ENST00000494836 ZNF660Q6AZW8 331 aaPredicted RBP12.82□□□□□ -0.36
YIF1A-209ENST00000494836 PYHIN1Q6K0P9 492 aa12.82□□□□□ -0.36
YIF1A-209ENST00000494836 LIN54Q6MZP7 749 aa12.82□□□□□ -0.36
YIF1A-209ENST00000494836 DHRS11Q6UWP2 260 aa12.82□□□□□ -0.36
YIF1A-209ENST00000494836 STPG2Q8N412 459 aa12.82□□□□□ -0.36
YIF1A-209ENST00000494836 OR4X2Q8NGF9 303 aa12.82□□□□□ -0.36
YIF1A-209ENST00000494836 OR6F1Q8NGZ6 308 aa12.82□□□□□ -0.36
YIF1A-209ENST00000494836 HARBI1Q96MB7 349 aa12.82□□□□□ -0.36
YIF1A-209ENST00000494836 HSD17B10Q99714 261 aaKnown RBP12.82□□□□□ -0.36
YIF1A-209ENST00000494836 ZNF2Q9BSG1 426 aaPredicted RBP12.82□□□□□ -0.36
YIF1A-209ENST00000494836 CCL28Q9NRJ3 127 aa12.82□□□□□ -0.36
YIF1A-209ENST00000494836 TAS2R8Q9NYW2 309 aa12.82□□□□□ -0.36
YIF1A-209ENST00000494836 KLK11Q9UBX7 282 aa12.82□□□□□ -0.36
YIF1A-209ENST00000494836 MTFP1Q9UDX5 166 aa12.82□□□□□ -0.36
YIF1A-209ENST00000494836 LINC00527Q9UJ94 153 aa12.82□□□□□ -0.36
YIF1A-209ENST00000494836 PRELID3BQ9Y3B1 194 aa12.82□□□□□ -0.36
YIF1A-209ENST00000494836 TET2Q6N021 2002 aaPredicted RBP12.82□□□□□ -0.36
YIF1A-209ENST00000494836 GABARAPH6UMI1 98 aa12.81□□□□□ -0.36
YIF1A-209ENST00000494836 SHOXO15266 292 aa12.81□□□□□ -0.36
YIF1A-209ENST00000494836 LGALS7P47929 136 aa12.81□□□□□ -0.36
YIF1A-209ENST00000494836 TSPAN5P62079 268 aa12.81□□□□□ -0.36
YIF1A-209ENST00000494836 SLC35B1P78383 322 aa12.81□□□□□ -0.36
YIF1A-209ENST00000494836 DGCR2P98153 550 aa12.81□□□□□ -0.36
YIF1A-209ENST00000494836 C2orf68Q2NKX9 166 aa12.81□□□□□ -0.36
YIF1A-209ENST00000494836 TMEM177Q53S58 311 aa12.81□□□□□ -0.36
YIF1A-209ENST00000494836 PRR31Q5SQ13 230 aa12.81□□□□□ -0.36
YIF1A-209ENST00000494836 HIST2H2BDQ6DRA6 164 aa12.81□□□□□ -0.36
YIF1A-209ENST00000494836 ZNF66Q6ZN08 573 aa12.81□□□□□ -0.36
YIF1A-209ENST00000494836 ZBTB34Q8NCN2 500 aa12.81□□□□□ -0.36
YIF1A-209ENST00000494836 TCTEX1D2Q8WW35 142 aa12.81□□□□□ -0.36
YIF1A-209ENST00000494836 BORCS5Q969J3 196 aa12.81□□□□□ -0.36
YIF1A-209ENST00000494836 MOB3AQ96BX8 217 aa12.81□□□□□ -0.36
YIF1A-209ENST00000494836 MMP27Q9H306 513 aa12.81□□□□□ -0.36
YIF1A-209ENST00000494836 METTL1Q9UBP6 276 aaKnown RBP12.81□□□□□ -0.36
YIF1A-209ENST00000494836 IGHV7-81A0A0B4J1V7 117 aa12.8□□□□□ -0.36
YIF1A-209ENST00000494836 SLC25A17O43808 307 aa12.8□□□□□ -0.36
YIF1A-209ENST00000494836 CRYZL1O95825 349 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms