RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 SLC25A31Q9H0C2 315 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 LYNX1G3V0Z9 82 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 ACACBO00763 2458 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 TOR1AO14656 332 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 SYNGR2O43760 224 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 FGF2P09038 288 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 LYNX1P0DP58 116 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 COL8A2P25067 703 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 PPOXP50336 477 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 TMEM30BQ3MIR4 351 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 TMEM200BQ69YZ2 307 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 LRRC20Q8TCA0 184 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 DDB2Q92466 427 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 RAB40CQ96S21 281 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 SAA2-SAA4A0A096LPE2 208 aa13.59□□□□□ -0.23
ATG4B-225ENST00000494465 FBXO24O75426 580 aa13.59□□□□□ -0.23
ATG4B-225ENST00000494465 SAA2P0DJI9 122 aaPredicted RBP13.59□□□□□ -0.23
ATG4B-225ENST00000494465 HFEQ30201 348 aa13.59□□□□□ -0.23
ATG4B-225ENST00000494465 HSD17B13Q7Z5P4 300 aaPredicted RBP13.59□□□□□ -0.23
ATG4B-225ENST00000494465 EIF4E3Q8N5X7 224 aaKnown RBP13.59□□□□□ -0.23
ATG4B-225ENST00000494465 CD300LFQ8TDQ1 290 aa13.59□□□□□ -0.23
ATG4B-225ENST00000494465 GINS3Q9BRX5 216 aa13.59□□□□□ -0.23
ATG4B-225ENST00000494465 WSB1Q9Y6I7 421 aa13.59□□□□□ -0.23
ATG4B-225ENST00000494465 A8MXK9 166 aa13.59□□□□□ -0.23
ATG4B-225ENST00000494465 DVL1O14640 695 aa13.59□□□□□ -0.23
ATG4B-225ENST00000494465 TXNL1O43396 289 aa13.59□□□□□ -0.23
ATG4B-225ENST00000494465 NDUFB3O43676 98 aa13.59□□□□□ -0.23
ATG4B-225ENST00000494465 CST7O76096 145 aa13.59□□□□□ -0.23
ATG4B-225ENST00000494465 CCL3L1P16619 93 aa13.59□□□□□ -0.23
ATG4B-225ENST00000494465 OR1S2Q8NGQ3 325 aa13.59□□□□□ -0.23
ATG4B-225ENST00000494465 FAM122AQ96E09 287 aa13.59□□□□□ -0.23
ATG4B-225ENST00000494465 LPAR3Q9UBY5 353 aa13.59□□□□□ -0.23
ATG4B-225ENST00000494465 BORCS7-ASMTA0A0B4J1R7 106 aa13.58□□□□□ -0.24
ATG4B-225ENST00000494465 FAM90A26D6RGX4 464 aa13.58□□□□□ -0.24
ATG4B-225ENST00000494465 H3BP45 60 aa13.58□□□□□ -0.24
ATG4B-225ENST00000494465 FCGR3BO75015 233 aa13.58□□□□□ -0.24
ATG4B-225ENST00000494465 BAXQ07812 192 aa13.58□□□□□ -0.24
ATG4B-225ENST00000494465 LRRC10Q5BKY1 277 aa13.58□□□□□ -0.24
ATG4B-225ENST00000494465 EIF5AL1Q6IS14 154 aaKnown RBP13.58□□□□□ -0.24
ATG4B-225ENST00000494465 SLC25A48Q6ZT89 311 aaKnown RBP13.58□□□□□ -0.24
ATG4B-225ENST00000494465 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.58□□□□□ -0.24
ATG4B-225ENST00000494465 HSPB7Q9UBY9 170 aa13.58□□□□□ -0.24
ATG4B-225ENST00000494465 LAMP3Q9UQV4 416 aa13.58□□□□□ -0.24
ATG4B-225ENST00000494465 CFAP46Q8IYW2 2715 aa13.58□□□□□ -0.24
ATG4B-225ENST00000494465 MARCH11A6NNE9 402 aa13.58□□□□□ -0.24
ATG4B-225ENST00000494465 RAB29O14966 203 aa13.58□□□□□ -0.24
ATG4B-225ENST00000494465 ATG12O94817 140 aa13.58□□□□□ -0.24
ATG4B-225ENST00000494465 IAPPP10997 89 aa13.58□□□□□ -0.24
ATG4B-225ENST00000494465 SULT1A2P50226 295 aa13.58□□□□□ -0.24
ATG4B-225ENST00000494465 DYNLT3P51808 116 aa13.58□□□□□ -0.24
ATG4B-225ENST00000494465 C11orf71Q6IPW1 123 aa13.58□□□□□ -0.24
ATG4B-225ENST00000494465 OR10A7Q8NGE5 316 aa13.58□□□□□ -0.24
ATG4B-225ENST00000494465 OR5C1Q8NGR4 320 aa13.58□□□□□ -0.24
ATG4B-225ENST00000494465 GAL3ST2Q9H3Q3 398 aa13.58□□□□□ -0.24
ATG4B-225ENST00000494465 IGSF10Q6WRI0 2623 aa13.57□□□□□ -0.24
ATG4B-225ENST00000494465 DOCK11Q5JSL3 2073 aa13.57□□□□□ -0.24
ATG4B-225ENST00000494465 RBFOX2O43251 390 aaKnown RBP eCLIP13.57□□□□□ -0.244e-7■■□□□ 14.2
ATG4B-225ENST00000494465 NDUFA2O43678 99 aa13.57□□□□□ -0.24
ATG4B-225ENST00000494465 SPP1P10451 314 aa13.57□□□□□ -0.24
ATG4B-225ENST00000494465 GNG10P50151 68 aa13.57□□□□□ -0.24
ATG4B-225ENST00000494465 TNFRSF9Q07011 255 aa13.57□□□□□ -0.24
ATG4B-225ENST00000494465 CLINT1Q14677 625 aa13.57□□□□□ -0.24
ATG4B-225ENST00000494465 HEPN1Q6WQI6 88 aa13.57□□□□□ -0.24
ATG4B-225ENST00000494465 SMIM8Q96KF7 97 aa13.57□□□□□ -0.24
ATG4B-225ENST00000494465 ZNF714Q96N38 554 aa13.57□□□□□ -0.24
ATG4B-225ENST00000494465 ZNRD1Q9P1U0 126 aa13.57□□□□□ -0.24
ATG4B-225ENST00000494465 FSTL3O95633 263 aa13.57□□□□□ -0.24
ATG4B-225ENST00000494465 HPRT1P00492 218 aa13.57□□□□□ -0.24
ATG4B-225ENST00000494465 PLA2G5P39877 138 aa13.57□□□□□ -0.24
ATG4B-225ENST00000494465 RPL23AP62750 156 aaKnown RBP13.57□□□□□ -0.24
ATG4B-225ENST00000494465 H2BFWTQ7Z2G1 175 aa13.57□□□□□ -0.24
ATG4B-225ENST00000494465 LYG1Q8N1E2 194 aa13.57□□□□□ -0.24
ATG4B-225ENST00000494465 H1FXQ92522 213 aaKnown RBP13.57□□□□□ -0.24
ATG4B-225ENST00000494465 R3HDM4Q96D70 268 aa13.57□□□□□ -0.24
ATG4B-225ENST00000494465 A0A1W2PPR1 153 aa13.56□□□□□ -0.24
ATG4B-225ENST00000494465 ZNF705EA8MWA4 302 aaPredicted RBP13.56□□□□□ -0.24
ATG4B-225ENST00000494465 SOD3P08294 240 aa13.56□□□□□ -0.24
ATG4B-225ENST00000494465 SEC11BP0C7V7 166 aa13.56□□□□□ -0.24
ATG4B-225ENST00000494465 AGAP20933 346 aa13.56□□□□□ -0.24
ATG4B-225ENST00000494465 DLX6P56179 175 aa13.56□□□□□ -0.24
ATG4B-225ENST00000494465 UBE2KP61086 200 aa13.56□□□□□ -0.24
ATG4B-225ENST00000494465 TMEM217Q8N7C4 229 aa13.56□□□□□ -0.24
ATG4B-225ENST00000494465 SH3BGRL3Q9H299 93 aa13.56□□□□□ -0.24
ATG4B-225ENST00000494465 RBKSQ9H477 322 aa13.56□□□□□ -0.24
ATG4B-225ENST00000494465 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.56□□□□□ -0.24
ATG4B-225ENST00000494465 CBLN4Q9NTU7 201 aa13.56□□□□□ -0.24
ATG4B-225ENST00000494465 IGHV2-70P01814 119 aa13.56□□□□□ -0.24
ATG4B-225ENST00000494465 TAS2R30P59541 319 aa13.56□□□□□ -0.24
ATG4B-225ENST00000494465 MRPS11P82912 194 aaKnown RBP13.56□□□□□ -0.24
ATG4B-225ENST00000494465 SAT2Q96F10 170 aaPredicted RBP13.56□□□□□ -0.24
ATG4B-225ENST00000494465 PSENENQ9NZ42 101 aa13.56□□□□□ -0.24
ATG4B-225ENST00000494465 DAOP14920 347 aa13.55□□□□□ -0.24
ATG4B-225ENST00000494465 SULT1A1P50225 295 aa13.55□□□□□ -0.24
ATG4B-225ENST00000494465 TMEM267Q0VDI3 215 aaPredicted RBP13.55□□□□□ -0.24
ATG4B-225ENST00000494465 ZNF266Q14584 549 aa13.55□□□□□ -0.24
ATG4B-225ENST00000494465 ZNF383Q8NA42 475 aa13.55□□□□□ -0.24
ATG4B-225ENST00000494465 HSD17B11Q8NBQ5 300 aa13.55□□□□□ -0.24
ATG4B-225ENST00000494465 S1PR3Q99500 378 aa13.55□□□□□ -0.24
ATG4B-225ENST00000494465 PRELID3BQ9Y3B1 194 aa13.55□□□□□ -0.24
ATG4B-225ENST00000494465 OR9G9P0C7N8 305 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms