RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 SLC25A17O43808 307 aa11.5□□□□□ -0.57
ATG4B-224ENST00000494132 SCAND1P57086 179 aa11.5□□□□□ -0.57
ATG4B-224ENST00000494132 CX3CL1P78423 397 aa11.5□□□□□ -0.57
ATG4B-224ENST00000494132 PITPNAQ00169 270 aa11.5□□□□□ -0.57
ATG4B-224ENST00000494132 PSG5Q15238 335 aa11.5□□□□□ -0.57
ATG4B-224ENST00000494132 SRSF7Q16629 238 aaKnown RBP eCLIP11.5□□□□□ -0.57
ATG4B-224ENST00000494132 PDPNQ86YL7 162 aa11.5□□□□□ -0.57
ATG4B-224ENST00000494132 ZNF695Q8IW36 515 aa11.5□□□□□ -0.57
ATG4B-224ENST00000494132 MRPL41Q8IXM3 137 aaKnown RBP11.5□□□□□ -0.57
ATG4B-224ENST00000494132 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.5□□□□□ -0.57
ATG4B-224ENST00000494132 BVESQ8NE79 360 aa11.5□□□□□ -0.57
ATG4B-224ENST00000494132 NAA50Q9GZZ1 169 aaKnown RBP11.5□□□□□ -0.57
ATG4B-224ENST00000494132 DCSTAMPQ9H295 470 aa11.5□□□□□ -0.57
ATG4B-224ENST00000494132 KLK15Q9H2R5 256 aa11.5□□□□□ -0.57
ATG4B-224ENST00000494132 ZFP57Q9NU63 452 aa11.5□□□□□ -0.57
ATG4B-224ENST00000494132 PRKDCP78527 4128 aaKnown RBP11.5□□□□□ -0.57
ATG4B-224ENST00000494132 TRAV41A0A0B4J266 112 aa11.49□□□□□ -0.57
ATG4B-224ENST00000494132 IGKV1D-13A0A0B4J2D9 117 aa11.49□□□□□ -0.57
ATG4B-224ENST00000494132 LINC00473A8K010 186 aa11.49□□□□□ -0.57
ATG4B-224ENST00000494132 RBBP9O75884 186 aa11.49□□□□□ -0.57
ATG4B-224ENST00000494132 DIRAS3O95661 229 aa11.49□□□□□ -0.57
ATG4B-224ENST00000494132 CA2P00918 260 aa11.49□□□□□ -0.57
ATG4B-224ENST00000494132 IGHG4P01861 327 aa11.49□□□□□ -0.57
ATG4B-224ENST00000494132 ELANEP08246 267 aa11.49□□□□□ -0.57
ATG4B-224ENST00000494132 IGKV1-13P0DP09 117 aa11.49□□□□□ -0.57
ATG4B-224ENST00000494132 PPIFP30405 207 aaKnown RBP11.49□□□□□ -0.57
ATG4B-224ENST00000494132 THBS3P49746 956 aa11.49□□□□□ -0.57
ATG4B-224ENST00000494132 FOXE3Q13461 319 aa11.49□□□□□ -0.57
ATG4B-224ENST00000494132 SAMD12Q8N8I0 201 aa11.49□□□□□ -0.57
ATG4B-224ENST00000494132 LINC00482Q8N8I6 264 aa11.49□□□□□ -0.57
ATG4B-224ENST00000494132 WFDC9Q8NEX5 89 aa11.49□□□□□ -0.57
ATG4B-224ENST00000494132 OR13F1Q8NGS4 319 aa11.49□□□□□ -0.57
ATG4B-224ENST00000494132 FLYWCH2Q96CP2 140 aaKnown RBP11.49□□□□□ -0.57
ATG4B-224ENST00000494132 AUNIPQ9H7T9 357 aa11.49□□□□□ -0.57
ATG4B-224ENST00000494132 DIABLOQ9NR28 239 aa11.49□□□□□ -0.57
ATG4B-224ENST00000494132 ANXA10Q9UJ72 324 aa11.49□□□□□ -0.57
ATG4B-224ENST00000494132 A0A1W2PN81 502 aa11.48□□□□□ -0.57
ATG4B-224ENST00000494132 IGLV2-23P01705 113 aa11.48□□□□□ -0.57
ATG4B-224ENST00000494132 OR5H8P0DN80 308 aa11.48□□□□□ -0.57
ATG4B-224ENST00000494132 PSMB8P28062 276 aa11.48□□□□□ -0.57
ATG4B-224ENST00000494132 DUTP33316 252 aaKnown RBP11.48□□□□□ -0.57
ATG4B-224ENST00000494132 CHRNA7P36544 502 aa11.48□□□□□ -0.57
ATG4B-224ENST00000494132 LUMP51884 338 aaPredicted RBP11.48□□□□□ -0.57
ATG4B-224ENST00000494132 RAB25P57735 213 aa11.48□□□□□ -0.57
ATG4B-224ENST00000494132 ARPC4P59998 168 aa11.48□□□□□ -0.57
ATG4B-224ENST00000494132 OR2B11Q5JQS5 317 aa11.48□□□□□ -0.57
ATG4B-224ENST00000494132 UBE2NLQ5JXB2 153 aa11.48□□□□□ -0.57
ATG4B-224ENST00000494132 CNIH2Q6PI25 160 aa11.48□□□□□ -0.57
ATG4B-224ENST00000494132 BEST4Q8NFU0 473 aa11.48□□□□□ -0.57
ATG4B-224ENST00000494132 RAX2Q96IS3 184 aa11.48□□□□□ -0.57
ATG4B-224ENST00000494132 HARBI1Q96MB7 349 aa11.48□□□□□ -0.57
ATG4B-224ENST00000494132 OR5B12Q96R08 314 aa11.48□□□□□ -0.57
ATG4B-224ENST00000494132 TSNAXQ99598 290 aaKnown RBP11.48□□□□□ -0.57
ATG4B-224ENST00000494132 OR2W1Q9Y3N9 320 aa11.48□□□□□ -0.57
ATG4B-224ENST00000494132 SHOXO15266 292 aa11.47□□□□□ -0.57
ATG4B-224ENST00000494132 SOX15O60248 233 aa11.47□□□□□ -0.57
ATG4B-224ENST00000494132 EIF4EP06730 217 aaKnown RBP11.47□□□□□ -0.57
ATG4B-224ENST00000494132 CTXN2P0C2S0 81 aa11.47□□□□□ -0.57
ATG4B-224ENST00000494132 EGR2P11161 476 aaPredicted RBP11.47□□□□□ -0.57
ATG4B-224ENST00000494132 GNB1P62873 340 aa11.47□□□□□ -0.57
ATG4B-224ENST00000494132 PJVKQ0ZLH3 352 aa11.47□□□□□ -0.57
ATG4B-224ENST00000494132 KPRPQ5T749 579 aaPredicted RBP11.47□□□□□ -0.57
ATG4B-224ENST00000494132 FOXB2Q5VYV0 432 aa11.47□□□□□ -0.57
ATG4B-224ENST00000494132 CROCCP3Q8IVE0 287 aa11.47□□□□□ -0.57
ATG4B-224ENST00000494132 RNF152Q8N8N0 203 aa11.47□□□□□ -0.57
ATG4B-224ENST00000494132 SLC25A46Q96AG3 418 aa11.47□□□□□ -0.57
ATG4B-224ENST00000494132 GPHA2Q96T91 129 aa11.47□□□□□ -0.57
ATG4B-224ENST00000494132 P2RX4Q99571 388 aa11.47□□□□□ -0.57
ATG4B-224ENST00000494132 GNB4Q9HAV0 340 aa11.47□□□□□ -0.57
ATG4B-224ENST00000494132 COMMD3Q9UBI1 195 aa11.47□□□□□ -0.57
ATG4B-224ENST00000494132 ZNF580Q9UK33 172 aa11.47□□□□□ -0.57
ATG4B-224ENST00000494132 A0A0A6YYH2 397 aa11.46□□□□□ -0.57
ATG4B-224ENST00000494132 A6NJ64 397 aa11.46□□□□□ -0.57
ATG4B-224ENST00000494132 SRRM4A7MD48 611 aaKnown RBP11.46□□□□□ -0.57
ATG4B-224ENST00000494132 CCL24O00175 119 aa11.46□□□□□ -0.57
ATG4B-224ENST00000494132 ARPC1BO15143 372 aaKnown RBP11.46□□□□□ -0.57
ATG4B-224ENST00000494132 XRCC3O43542 346 aa11.46□□□□□ -0.57
ATG4B-224ENST00000494132 TUSC2O75896 110 aa11.46□□□□□ -0.57
ATG4B-224ENST00000494132 CRYZL1O95825 349 aa11.46□□□□□ -0.57
ATG4B-224ENST00000494132 HLA-DQB1P01920 261 aa11.46□□□□□ -0.57
ATG4B-224ENST00000494132 HOXD3P31249 432 aaPredicted RBP11.46□□□□□ -0.57
ATG4B-224ENST00000494132 MYCNOSP40205 109 aa11.46□□□□□ -0.57
ATG4B-224ENST00000494132 RTL8BQ17RB0 113 aa11.46□□□□□ -0.57
ATG4B-224ENST00000494132 TMEM69Q5SWH9 247 aa11.46□□□□□ -0.57
ATG4B-224ENST00000494132 ZNF660Q6AZW8 331 aaPredicted RBP11.46□□□□□ -0.57
ATG4B-224ENST00000494132 TMEM65Q6PI78 240 aa11.46□□□□□ -0.57
ATG4B-224ENST00000494132 UNQ5815/PRO19632Q6UWF5 114 aa11.46□□□□□ -0.57
ATG4B-224ENST00000494132 PPP1R27Q86WC6 154 aa11.46□□□□□ -0.57
ATG4B-224ENST00000494132 HOGA1Q86XE5 327 aa11.46□□□□□ -0.57
ATG4B-224ENST00000494132 ZNF645Q8N7E2 425 aa11.46□□□□□ -0.57
ATG4B-224ENST00000494132 LFNGQ8NES3 379 aa11.46□□□□□ -0.57
ATG4B-224ENST00000494132 GRPEL2Q8TAA5 225 aa11.46□□□□□ -0.57
ATG4B-224ENST00000494132 DDB2Q92466 427 aa11.46□□□□□ -0.57
ATG4B-224ENST00000494132 SNAPC3Q92966 411 aa11.46□□□□□ -0.57
ATG4B-224ENST00000494132 S100A16Q96FQ6 103 aaKnown RBP11.46□□□□□ -0.57
ATG4B-224ENST00000494132 RNF5Q99942 180 aa11.46□□□□□ -0.57
ATG4B-224ENST00000494132 SPDEFO95238 335 aa11.45□□□□□ -0.58
ATG4B-224ENST00000494132 IGLV1-40P01703 118 aa11.45□□□□□ -0.58
ATG4B-224ENST00000494132 IGLV2-14P01704 120 aa11.45□□□□□ -0.58
ATG4B-224ENST00000494132 AADACP22760 399 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms