RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 FAM27BQ5VT28 67 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 ZNF705AQ6ZN79 300 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-234ENST00000493923 Q6ZR03 302 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 SLC16A9Q7RTY1 509 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 ZNF429Q86V71 674 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 HOGA1Q86XE5 327 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 ZNF679Q8IYX0 411 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 FAM185AQ8N0U4 392 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 C11orf42Q8N5U0 333 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 OR51A2Q8NGJ7 313 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 KLF14Q8TD94 323 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-234ENST00000493923 ABHD5Q8WTS1 349 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 C11orf40Q8WZ69 217 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 RGP1Q92546 391 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-234ENST00000493923 TNFRSF14Q92956 283 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 DVL3Q92997 716 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-234ENST00000493923 TMEM186Q96B77 213 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 RASD2Q96D21 266 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 FAM71F1Q96KD3 344 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-234ENST00000493923 SLC6A7Q99884 636 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 ALG12Q9BV10 488 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 HIPK2Q9H2X6 1198 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 ZNF665Q9H7R5 613 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 FBXL17Q9UF56 701 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 NAGKQ9UJ70 344 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 SIGLEC7Q9Y286 467 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 NSG2Q9Y328 171 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 WIPI2Q9Y4P8 454 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 DOCK11Q5JSL3 2073 aa6.83□□□□□ -1.32
HDAC6-234ENST00000493923 TGIF2-C20orf24A0A0A6YYL0 155 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 IGHV1-69-2A0A0G2JMI3 117 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 XKRY2A2RUG3 117 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 MSGN1A6NI15 193 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 DHRS7CA6NNS2 312 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 XKRYO14609 159 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 HSD17B6O14756 317 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 ZFPL1O95159 310 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 NDUFB2O95178 105 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 ABHD16AO95870 558 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 KNG1P01042 644 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 MSMBP08118 114 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 SRP19P09132 144 aaKnown RBP6.82□□□□□ -1.32
HDAC6-234ENST00000493923 OR13C7P0DN81 318 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 PTHLHP12272 177 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 FSTP19883 344 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 ANOS1P23352 680 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 ZFP36P26651 326 aaKnown RBP6.82□□□□□ -1.32
HDAC6-234ENST00000493923 RPL29P47914 159 aaKnown RBP6.82□□□□□ -1.32
HDAC6-234ENST00000493923 RAB7AP51149 207 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 SLC25A1P53007 311 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 PPP1CBP62140 327 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 VAMP2P63027 116 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 PLP2Q04941 152 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 EGR3Q06889 387 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 PSG7Q13046 419 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 MAJINQ3KP22 176 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 C2orf76Q3KRA6 126 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 LINC01559Q495D7 138 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 NRN1LQ496H8 165 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 VAX1Q5SQQ9 334 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 GFI1BQ5VTD9 330 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 ETFRF1Q6IPR1 90 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 FDX2Q6P4F2 183 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 ZNF676Q8N7Q3 588 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 CYB561A3Q8NBI2 242 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 OR51D1Q8NGF3 324 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 TMEM170AQ8WVE7 144 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 FAM46BQ96A09 425 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 MOB3AQ96BX8 217 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 SLC35E1Q96K37 410 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 SNX22Q96L94 193 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 FAAP24Q9BTP7 215 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.82□□□□□ -1.32
HDAC6-234ENST00000493923 C1orf123Q9NWV4 160 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 HSPB7Q9UBY9 170 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 RAB22AQ9UL26 194 aa6.82□□□□□ -1.32
HDAC6-234ENST00000493923 MEGF8Q7Z7M0 2845 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 FAM181BA6NEQ2 426 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 SOX15O60248 233 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 DEDDO75618 318 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 SCGB1D1O95968 90 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 TOMM40O96008 361 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 PNPP00491 289 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 DBHP09172 617 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 IRF2P14316 349 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 AKR1C4P17516 323 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 MSR1P21757 451 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 DTYMKP23919 212 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 CDKN2AP42771 156 aaKnown RBP6.81□□□□□ -1.32
HDAC6-234ENST00000493923 ERVFRD-1P60508 538 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 S100A10P60903 97 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 RPL19P84098 196 aaKnown RBP6.81□□□□□ -1.32
HDAC6-234ENST00000493923 HOXA4Q00056 320 aaPredicted RBP6.81□□□□□ -1.32
HDAC6-234ENST00000493923 IL15RAQ13261 267 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 UBE2V1Q13404 147 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 RAB32Q13637 225 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 ZNF266Q14584 549 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 MEP1BQ16820 701 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 ZNF718Q3SXZ3 478 aa6.81□□□□□ -1.32
HDAC6-234ENST00000493923 ZNF684Q5T5D7 378 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms