RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 CLDN14O95500 239 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 IFNW1P05000 195 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 OR7A5Q15622 319 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 C1orf140Q5VVS0 124 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 Q6ZN92 141 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 TCEANCQ8N8B7 351 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 BLNKQ8WV28 456 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 EMG1Q92979 244 aaKnown RBP9.84□□□□□ -0.83
BRCA1-222ENST00000493919 FGGYQ96C11 551 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 RNF183Q96D59 192 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 BTF3L4Q96K17 158 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 NDFIP1Q9BT67 221 aa9.84□□□□□ -0.83
BRCA1-222ENST00000493919 CACNA1CQ13936 2221 aa9.83□□□□□ -0.84
BRCA1-222ENST00000493919 IGHV2-26A0A0B4J1V2 119 aa9.83□□□□□ -0.84
BRCA1-222ENST00000493919 A0A1B0GUS0 222 aa9.83□□□□□ -0.84
BRCA1-222ENST00000493919 PSMB11A5LHX3 300 aa9.83□□□□□ -0.84
BRCA1-222ENST00000493919 MSTNO14793 375 aa9.83□□□□□ -0.84
BRCA1-222ENST00000493919 RS1O15537 224 aa9.83□□□□□ -0.84
BRCA1-222ENST00000493919 NDUFB6O95139 128 aa9.83□□□□□ -0.84
BRCA1-222ENST00000493919 PMS2P2O95744 297 aa9.83□□□□□ -0.84
BRCA1-222ENST00000493919 FKBP2P26885 142 aaKnown RBP9.83□□□□□ -0.84
BRCA1-222ENST00000493919 LRRC75AQ8NAA5 344 aa9.83□□□□□ -0.84
BRCA1-222ENST00000493919 OR51A2Q8NGJ7 313 aa9.83□□□□□ -0.84
BRCA1-222ENST00000493919 OR4X1Q8NH49 305 aa9.83□□□□□ -0.84
BRCA1-222ENST00000493919 RNF128Q8TEB7 428 aa9.83□□□□□ -0.84
BRCA1-222ENST00000493919 HIST1H2AAQ96QV6 131 aa9.83□□□□□ -0.84
BRCA1-222ENST00000493919 PPDPFQ9H3Y8 114 aa9.83□□□□□ -0.84
BRCA1-222ENST00000493919 UBTD1Q9HAC8 227 aa9.83□□□□□ -0.84
BRCA1-222ENST00000493919 DCAF13Q9NV06 445 aaKnown RBP9.83□□□□□ -0.84
BRCA1-222ENST00000493919 THYN1Q9P016 225 aa9.83□□□□□ -0.84
BRCA1-222ENST00000493919 INTS1Q8N201 2190 aaKnown RBP9.83□□□□□ -0.84
BRCA1-222ENST00000493919 CRYBG3Q68DQ2 2970 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 B5MCH6 92 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 F5H768 121 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 J3KTA2 159 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 CLDN1O95832 211 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 IGLC2P0DOY2 106 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 IGLC3P0DOY3 106 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 GATA3P23771 443 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 CTRLP40313 264 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 SULT1A2P50226 295 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 HIST1H1AQ02539 215 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-222ENST00000493919 NIPAL3Q6P499 406 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 TGIF2LYQ8IUE0 185 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 OR52I1Q8NGK6 324 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 OR52I2Q8NH67 350 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 LGALS14Q8TCE9 139 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 SMIM4Q8WVI0 70 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 SFXN3Q9BWM7 321 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 TMEM126AQ9H061 195 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 EGLN3Q9H6Z9 239 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 KLHL13Q9P2N7 655 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 PRSS50Q9UI38 385 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 SIGLEC9Q9Y336 463 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 IGKV1D-42A0A075B6H8 117 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 LOC100509620A0A075B734 347 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-222ENST00000493919 C15orf65H3BRN8 121 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 HIST1H1EP10412 219 aaKnown RBP9.82□□□□□ -0.84
BRCA1-222ENST00000493919 OPRM1P35372 400 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 MEF2BQ02080 365 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-222ENST00000493919 FOXE3Q13461 319 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 TMEM78Q5T7P6 136 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 AMMECR1LQ6DCA0 310 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 UFSP1Q6NVU6 142 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 ZNF788Q6ZQV5 615 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 MUC15Q8N387 334 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 POC1AQ8NBT0 407 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 GMPPAQ96IJ6 420 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-222ENST00000493919 TMEM106BQ9NUM4 274 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 EMC9Q9Y3B6 208 aa9.82□□□□□ -0.84
BRCA1-222ENST00000493919 ICE1Q9Y2F5 2266 aa9.81□□□□□ -0.84
BRCA1-222ENST00000493919 TRAV36DV7A0A075B6V5 113 aa9.81□□□□□ -0.84
BRCA1-222ENST00000493919 TAX1BP3O14907 124 aa9.81□□□□□ -0.84
BRCA1-222ENST00000493919 THBS3P49746 956 aa9.81□□□□□ -0.84
BRCA1-222ENST00000493919 GPM6AP51674 278 aa9.81□□□□□ -0.84
BRCA1-222ENST00000493919 RPL24P83731 157 aaKnown RBP9.81□□□□□ -0.84
BRCA1-222ENST00000493919 RNPS1Q15287 305 aaKnown RBP9.81□□□□□ -0.84
BRCA1-222ENST00000493919 ACKR1Q16570 336 aa9.81□□□□□ -0.84
BRCA1-222ENST00000493919 UTF1Q5T230 341 aa9.81□□□□□ -0.84
BRCA1-222ENST00000493919 FOXI2Q6ZQN5 318 aa9.81□□□□□ -0.84
BRCA1-222ENST00000493919 C19orf35Q6ZS72 473 aa9.81□□□□□ -0.84
BRCA1-222ENST00000493919 FAM214BQ7L5A3 538 aa9.81□□□□□ -0.84
BRCA1-222ENST00000493919 LFNGQ8NES3 379 aa9.81□□□□□ -0.84
BRCA1-222ENST00000493919 SDSLQ96GA7 329 aa9.81□□□□□ -0.84
BRCA1-222ENST00000493919 GRAMD2BQ96HH9 432 aa9.81□□□□□ -0.84
BRCA1-222ENST00000493919 MED29Q9NX70 200 aa9.81□□□□□ -0.84
BRCA1-222ENST00000493919 NAT8BQ9UHF3 227 aa9.81□□□□□ -0.84
BRCA1-222ENST00000493919 PAM16Q9Y3D7 125 aa9.81□□□□□ -0.84
BRCA1-222ENST00000493919 ASH1LQ9NR48 2969 aaKnown RBP9.81□□□□□ -0.84
BRCA1-222ENST00000493919 NBPF19A0A087WUL8 3843 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 DNPH1O43598 174 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 PLPP2O43688 288 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 RAMP1O60894 148 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 SS18L1O75177 396 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-222ENST00000493919 NPIPB7O75200 414 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 DIRAS1O95057 198 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 ORM1P02763 201 aa9.8□□□□□ -0.84
BRCA1-222ENST00000493919 USF1P22415 310 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-222ENST00000493919 GUCA1AP43080 201 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms