RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 ELOVL1Q9BW60 279 aa12.8□□□□□ -0.36
PTPRU-208ENST00000493601 C13orf42A0A1B0GVH6 325 aa12.79□□□□□ -0.36
PTPRU-208ENST00000493601 ERICH4A6NGS2 130 aa12.79□□□□□ -0.36
PTPRU-208ENST00000493601 H3BUA1 57 aa12.79□□□□□ -0.36
PTPRU-208ENST00000493601 DENRO43583 198 aaKnown RBP12.79□□□□□ -0.36
PTPRU-208ENST00000493601 FRMD6-AS1P0C7T7 363 aa12.79□□□□□ -0.36
PTPRU-208ENST00000493601 PSMD7P51665 324 aa12.79□□□□□ -0.36
PTPRU-208ENST00000493601 AQP4P55087 323 aa12.79□□□□□ -0.36
PTPRU-208ENST00000493601 CLDN12P56749 244 aa12.79□□□□□ -0.36
PTPRU-208ENST00000493601 PLAC9Q5JTB6 97 aa12.79□□□□□ -0.36
PTPRU-208ENST00000493601 SBSPONQ8IVN8 264 aa12.79□□□□□ -0.36
PTPRU-208ENST00000493601 POC5Q8NA72 575 aa12.79□□□□□ -0.36
PTPRU-208ENST00000493601 RHOVQ96L33 236 aa12.79□□□□□ -0.36
PTPRU-208ENST00000493601 DUSP21Q9H596 190 aa12.79□□□□□ -0.36
PTPRU-208ENST00000493601 ACOT13Q9NPJ3 140 aa12.79□□□□□ -0.36
PTPRU-208ENST00000493601 ZNF355PQ9NSJ1 428 aa12.79□□□□□ -0.36
PTPRU-208ENST00000493601 SLC35D1Q9NTN3 355 aa12.79□□□□□ -0.36
PTPRU-208ENST00000493601 STUB1Q9UNE7 303 aa12.79□□□□□ -0.36
PTPRU-208ENST00000493601 V9GY05 133 aa12.79□□□□□ -0.36
PTPRU-208ENST00000493601 FABP7O15540 132 aa12.78□□□□□ -0.36
PTPRU-208ENST00000493601 CNIH1O95406 144 aa12.78□□□□□ -0.36
PTPRU-208ENST00000493601 CD3GP09693 182 aa12.78□□□□□ -0.36
PTPRU-208ENST00000493601 ZP3P21754 424 aa12.78□□□□□ -0.36
PTPRU-208ENST00000493601 LINC00205P59089 165 aa12.78□□□□□ -0.36
PTPRU-208ENST00000493601 FABP5Q01469 135 aa12.78□□□□□ -0.36
PTPRU-208ENST00000493601 CBX3Q13185 183 aa12.78□□□□□ -0.36
PTPRU-208ENST00000493601 C2orf76Q3KRA6 126 aa12.78□□□□□ -0.36
PTPRU-208ENST00000493601 OVCH2Q7RTZ1 564 aa12.78□□□□□ -0.36
PTPRU-208ENST00000493601 MUC7Q8TAX7 377 aa12.78□□□□□ -0.36
PTPRU-208ENST00000493601 CCDC90BQ9GZT6 254 aa12.78□□□□□ -0.36
PTPRU-208ENST00000493601 OR2D2Q9H210 308 aa12.78□□□□□ -0.36
PTPRU-208ENST00000493601 RAB22AQ9UL26 194 aa12.78□□□□□ -0.36
PTPRU-208ENST00000493601 A0A0G2JLM5 398 aa12.77□□□□□ -0.37
PTPRU-208ENST00000493601 TMEM272A0A1B0GTI8 110 aa12.77□□□□□ -0.37
PTPRU-208ENST00000493601 TRIM64CA6NLI5 447 aa12.77□□□□□ -0.37
PTPRU-208ENST00000493601 BET1O15155 118 aa12.77□□□□□ -0.37
PTPRU-208ENST00000493601 LDLRAD4O15165 306 aa12.77□□□□□ -0.37
PTPRU-208ENST00000493601 DIRAS3O95661 229 aa12.77□□□□□ -0.37
PTPRU-208ENST00000493601 FCGR3AP08637 254 aa12.77□□□□□ -0.37
PTPRU-208ENST00000493601 LGALS7P47929 136 aa12.77□□□□□ -0.37
PTPRU-208ENST00000493601 TAGLNQ01995 201 aaKnown RBP12.77□□□□□ -0.37
PTPRU-208ENST00000493601 MOGAT2Q3SYC2 334 aa12.77□□□□□ -0.37
PTPRU-208ENST00000493601 PRSS48Q7RTY5 328 aa12.77□□□□□ -0.37
PTPRU-208ENST00000493601 OR10J5Q8NHC4 309 aa12.77□□□□□ -0.37
PTPRU-208ENST00000493601 RAB3CQ96E17 227 aa12.77□□□□□ -0.37
PTPRU-208ENST00000493601 HARBI1Q96MB7 349 aa12.77□□□□□ -0.37
PTPRU-208ENST00000493601 MGLLQ99685 303 aa12.77□□□□□ -0.37
PTPRU-208ENST00000493601 CABLES2Q9BTV7 478 aa12.77□□□□□ -0.37
PTPRU-208ENST00000493601 ZMAT4Q9H898 229 aa12.77□□□□□ -0.37
PTPRU-208ENST00000493601 RANGRFQ9HD47 186 aaPredicted RBP12.77□□□□□ -0.37
PTPRU-208ENST00000493601 NKX1-2Q9UD57 310 aaPredicted RBP12.77□□□□□ -0.37
PTPRU-208ENST00000493601 IGLV2-23P01705 113 aa12.76□□□□□ -0.37
PTPRU-208ENST00000493601 SNRPBP14678 240 aaKnown RBP12.76□□□□□ -0.37
PTPRU-208ENST00000493601 GADD45AP24522 165 aa12.76□□□□□ -0.37
PTPRU-208ENST00000493601 SRSF7Q16629 238 aaKnown RBP eCLIP12.76□□□□□ -0.37
PTPRU-208ENST00000493601 RTL8BQ17RB0 113 aa12.76□□□□□ -0.37
PTPRU-208ENST00000493601 HES5Q5TA89 166 aa12.76□□□□□ -0.37
PTPRU-208ENST00000493601 ANKRD13BQ86YJ7 626 aa12.76□□□□□ -0.37
PTPRU-208ENST00000493601 TMEM68Q96MH6 324 aa12.76□□□□□ -0.37
PTPRU-208ENST00000493601 RSRP1Q9BUV0 290 aa12.76□□□□□ -0.37
PTPRU-208ENST00000493601 SDHAF2Q9NX18 166 aa12.76□□□□□ -0.37
PTPRU-208ENST00000493601 KCNK7Q9Y2U2 307 aa12.76□□□□□ -0.37
PTPRU-208ENST00000493601 TRBV6-7A0A0A0MS04 114 aa12.75□□□□□ -0.37
PTPRU-208ENST00000493601 PDCD5O14737 125 aa12.75□□□□□ -0.37
PTPRU-208ENST00000493601 IGLV1-51P01701 117 aa12.75□□□□□ -0.37
PTPRU-208ENST00000493601 CRHBPP24387 322 aa12.75□□□□□ -0.37
PTPRU-208ENST00000493601 SSBP2P81877 361 aaPredicted RBP12.75□□□□□ -0.37
PTPRU-208ENST00000493601 IGSF11Q5DX21 431 aa12.75□□□□□ -0.37
PTPRU-208ENST00000493601 HUWE1Q7Z6Z7 4374 aaKnown RBP12.75□□□□□ -0.37
PTPRU-208ENST00000493601 OR5T1Q8NG75 326 aa12.75□□□□□ -0.37
PTPRU-208ENST00000493601 NRG4Q8WWG1 115 aa12.75□□□□□ -0.37
PTPRU-208ENST00000493601 ANKRD65E5RJM6 399 aa12.74□□□□□ -0.37
PTPRU-208ENST00000493601 SHOXO15266 292 aa12.74□□□□□ -0.37
PTPRU-208ENST00000493601 BRI3O95415 125 aa12.74□□□□□ -0.37
PTPRU-208ENST00000493601 CRYGBP07316 175 aa12.74□□□□□ -0.37
PTPRU-208ENST00000493601 RRASP10301 218 aa12.74□□□□□ -0.37
PTPRU-208ENST00000493601 AADACP22760 399 aa12.74□□□□□ -0.37
PTPRU-208ENST00000493601 PJVKQ0ZLH3 352 aa12.74□□□□□ -0.37
PTPRU-208ENST00000493601 PLA2G7Q13093 441 aa12.74□□□□□ -0.37
PTPRU-208ENST00000493601 TBCEQ15813 527 aaPredicted RBP12.74□□□□□ -0.37
PTPRU-208ENST00000493601 CASC10Q5T4H9 136 aa12.74□□□□□ -0.37
PTPRU-208ENST00000493601 ZNF367Q7RTV3 350 aa12.74□□□□□ -0.37
PTPRU-208ENST00000493601 HAPLN4Q86UW8 402 aa12.74□□□□□ -0.37
PTPRU-208ENST00000493601 OR10R2Q8NGX6 335 aa12.74□□□□□ -0.37
PTPRU-208ENST00000493601 GINS4Q9BRT9 223 aa12.74□□□□□ -0.37
PTPRU-208ENST00000493601 CENPOQ9BU64 300 aa12.74□□□□□ -0.37
PTPRU-208ENST00000493601 RBM7Q9Y580 266 aaKnown RBP12.74□□□□□ -0.37
PTPRU-208ENST00000493601 TRAV1-2A0A0B4J238 106 aa12.73□□□□□ -0.37
PTPRU-208ENST00000493601 ANKRD34BA5PLL1 514 aa12.73□□□□□ -0.37
PTPRU-208ENST00000493601 MFNGO00587 321 aa12.73□□□□□ -0.37
PTPRU-208ENST00000493601 GSTT2P0CG29 244 aa12.73□□□□□ -0.37
PTPRU-208ENST00000493601 GSTT2BP0CG30 244 aa12.73□□□□□ -0.37
PTPRU-208ENST00000493601 IGHV4-30-4P0DP06 118 aa12.73□□□□□ -0.37
PTPRU-208ENST00000493601 HIST1H1DP16402 221 aaKnown RBP12.73□□□□□ -0.37
PTPRU-208ENST00000493601 GNB3P16520 340 aa12.73□□□□□ -0.37
PTPRU-208ENST00000493601 RAB6AP20340 208 aa12.73□□□□□ -0.37
PTPRU-208ENST00000493601 MYL9P24844 172 aa12.73□□□□□ -0.37
PTPRU-208ENST00000493601 MAP2K4P45985 399 aa12.73□□□□□ -0.37
PTPRU-208ENST00000493601 TMEM177Q53S58 311 aa12.73□□□□□ -0.37
PTPRU-208ENST00000493601 SGPP2Q8IWX5 399 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms