RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 MARCH1Q8TCQ1 289 aa9.31□□□□□ -0.92
LSM2-214ENST00000493387 CD300LFQ8TDQ1 290 aa9.31□□□□□ -0.92
LSM2-214ENST00000493387 PITPNC1Q9UKF7 332 aa9.31□□□□□ -0.92
LSM2-214ENST00000493387 GPR132Q9UNW8 380 aa9.31□□□□□ -0.92
LSM2-214ENST00000493387 SOX21Q9Y651 276 aaPredicted RBP9.31□□□□□ -0.92
LSM2-214ENST00000493387 POMT1Q9Y6A1 747 aa9.31□□□□□ -0.92
LSM2-214ENST00000493387 ZNF469Q96JG9 3925 aaPredicted RBP9.31□□□□□ -0.92
LSM2-214ENST00000493387 FAM240BA0A1B0GVZ2 78 aa9.3□□□□□ -0.92
LSM2-214ENST00000493387 FAM90A9PA6NNJ1 464 aa9.3□□□□□ -0.92
LSM2-214ENST00000493387 H0YJW9 148 aa9.3□□□□□ -0.92
LSM2-214ENST00000493387 PGLYRP1O75594 196 aaPredicted RBP9.3□□□□□ -0.92
LSM2-214ENST00000493387 B3GALNT1O75752 331 aa9.3□□□□□ -0.92
LSM2-214ENST00000493387 NDUFB6O95139 128 aa9.3□□□□□ -0.92
LSM2-214ENST00000493387 IFNA2P01563 188 aa9.3□□□□□ -0.92
LSM2-214ENST00000493387 IER3P46695 156 aa9.3□□□□□ -0.92
LSM2-214ENST00000493387 IFITM3Q01628 133 aa9.3□□□□□ -0.92
LSM2-214ENST00000493387 BAMBIQ13145 260 aa9.3□□□□□ -0.92
LSM2-214ENST00000493387 EIF4EBP1Q13541 118 aaPredicted RBP9.3□□□□□ -0.92
LSM2-214ENST00000493387 DCTN2Q13561 401 aaKnown RBP9.3□□□□□ -0.92
LSM2-214ENST00000493387 PHLDA2Q53GA4 152 aa9.3□□□□□ -0.92
LSM2-214ENST00000493387 LIAT1Q6ZQX7 453 aa9.3□□□□□ -0.92
LSM2-214ENST00000493387 KCTD9Q7L273 389 aa9.3□□□□□ -0.92
LSM2-214ENST00000493387 PDPNQ86YL7 162 aa9.3□□□□□ -0.92
LSM2-214ENST00000493387 OR2T10Q8NGZ9 312 aa9.3□□□□□ -0.92
LSM2-214ENST00000493387 CAPSLQ8WWF8 208 aa9.3□□□□□ -0.92
LSM2-214ENST00000493387 CFHR4Q92496 578 aa9.3□□□□□ -0.92
LSM2-214ENST00000493387 C5orf30Q96GV9 206 aa9.3□□□□□ -0.92
LSM2-214ENST00000493387 ZNF48Q96MX3 618 aaPredicted RBP9.3□□□□□ -0.92
LSM2-214ENST00000493387 RNF5Q99942 180 aa9.3□□□□□ -0.92
LSM2-214ENST00000493387 TBC1D24Q9ULP9 559 aa9.3□□□□□ -0.92
LSM2-214ENST00000493387 WASHC3Q9Y3C0 194 aa9.3□□□□□ -0.92
LSM2-214ENST00000493387 MDFIC2A0A1B0GVS7 189 aa9.29□□□□□ -0.92
LSM2-214ENST00000493387 CLDN34H7C241 214 aa9.29□□□□□ -0.92
LSM2-214ENST00000493387 MPPED1O15442 326 aa9.29□□□□□ -0.92
LSM2-214ENST00000493387 VENTXO95231 258 aa9.29□□□□□ -0.92
LSM2-214ENST00000493387 MOSP00540 346 aa9.29□□□□□ -0.92
LSM2-214ENST00000493387 SLC6A1P30531 599 aa9.29□□□□□ -0.92
LSM2-214ENST00000493387 PIGPP57054 158 aa9.29□□□□□ -0.92
LSM2-214ENST00000493387 TAS2R31P59538 309 aa9.29□□□□□ -0.92
LSM2-214ENST00000493387 EBI3Q14213 229 aa9.29□□□□□ -0.92
LSM2-214ENST00000493387 DHRS7BQ6IAN0 325 aaPredicted RBP9.29□□□□□ -0.92
LSM2-214ENST00000493387 ZNF383Q8NA42 475 aa9.29□□□□□ -0.92
LSM2-214ENST00000493387 DRAXINQ8NBI3 349 aaPredicted RBP9.29□□□□□ -0.92
LSM2-214ENST00000493387 ENKURQ8TC29 256 aa9.29□□□□□ -0.92
LSM2-214ENST00000493387 TCTEX1D2Q8WW35 142 aa9.29□□□□□ -0.92
LSM2-214ENST00000493387 MRGPRFQ96AM1 343 aa9.29□□□□□ -0.92
LSM2-214ENST00000493387 SLC2A9Q9NRM0 540 aa9.29□□□□□ -0.92
LSM2-214ENST00000493387 FAM212BQ9NTI7 297 aaPredicted RBP9.29□□□□□ -0.92
LSM2-214ENST00000493387 SLC35D1Q9NTN3 355 aa9.29□□□□□ -0.92
LSM2-214ENST00000493387 LIN7CQ9NUP9 197 aaKnown RBP9.29□□□□□ -0.92
LSM2-214ENST00000493387 FN1P02751 2386 aaKnown RBP9.29□□□□□ -0.92
LSM2-214ENST00000493387 IGHV3-72A0A0B4J1Y9 119 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 H3BUX3 64 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 H7C2Y5 167 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 RBFOX2O43251 390 aaKnown RBP eCLIP9.28□□□□□ -0.92
LSM2-214ENST00000493387 TNFSF12O43508 249 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 TCRBP04435 133 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 SNRNP70P08621 437 aaKnown RBP9.28□□□□□ -0.92
LSM2-214ENST00000493387 F2RP25116 425 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 BTCP35070 178 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 LGALS7P47929 136 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 CCR6P51684 374 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 HILS1P60008 231 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 UBE2MP61081 183 aaKnown RBP9.28□□□□□ -0.92
LSM2-214ENST00000493387 HES1Q14469 280 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 GLDNQ6ZMI3 551 aaPredicted RBP9.28□□□□□ -0.92
LSM2-214ENST00000493387 C16orf82Q7Z2V1 217 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 TBC1D26Q86UD7 250 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 OR8H1Q8NGG4 311 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 OR4C13Q8NGP0 309 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 OR4S2Q8NH73 311 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 PIFOQ8TCI5 191 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 DDB2Q92466 427 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 FLYWCH2Q96CP2 140 aaKnown RBP9.28□□□□□ -0.92
LSM2-214ENST00000493387 AIFM2Q9BRQ8 373 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 RTBDNQ9BSG5 229 aaPredicted RBP9.28□□□□□ -0.92
LSM2-214ENST00000493387 C5orf66Q9H5L9 145 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 RAB18Q9NP72 206 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 C1RLQ9NZP8 487 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 TCF19Q9Y242 345 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 VSIG4Q9Y279 399 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 KCNIP3Q9Y2W7 256 aa9.28□□□□□ -0.92
LSM2-214ENST00000493387 MTORP42345 2549 aa9.27□□□□□ -0.93
LSM2-214ENST00000493387 PIGBOS1A0A0B4J2F0 54 aa9.27□□□□□ -0.93
LSM2-214ENST00000493387 TEX13DA0A0J9YY54 714 aaPredicted RBP9.27□□□□□ -0.93
LSM2-214ENST00000493387 A6NDX4 124 aa9.27□□□□□ -0.93
LSM2-214ENST00000493387 LINC00473A8K010 186 aa9.27□□□□□ -0.93
LSM2-214ENST00000493387 M0QZK8 103 aa9.27□□□□□ -0.93
LSM2-214ENST00000493387 HOXA3O43365 443 aaPredicted RBP9.27□□□□□ -0.93
LSM2-214ENST00000493387 TCF21O43680 179 aa9.27□□□□□ -0.93
LSM2-214ENST00000493387 FCGR3BO75015 233 aa9.27□□□□□ -0.93
LSM2-214ENST00000493387 IGKV1D-33P01593 117 aa9.27□□□□□ -0.93
LSM2-214ENST00000493387 IGKV1-33P01594 117 aa9.27□□□□□ -0.93
LSM2-214ENST00000493387 IGHV4-59P01825 116 aa9.27□□□□□ -0.93
LSM2-214ENST00000493387 RLN1P04808 185 aa9.27□□□□□ -0.93
LSM2-214ENST00000493387 TMEM11P17152 192 aa9.27□□□□□ -0.93
LSM2-214ENST00000493387 PI3P19957 117 aa9.27□□□□□ -0.93
LSM2-214ENST00000493387 PAX6P26367 422 aa9.27□□□□□ -0.93
LSM2-214ENST00000493387 RPL30P62888 115 aaKnown RBP9.27□□□□□ -0.93
LSM2-214ENST00000493387 SGPP2Q8IWX5 399 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms