RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 ZNF562Q6V9R5 426 aa15.96■□□□□ 0.15
CLTA-208ENST00000493185 FLYWCH2Q96CP2 140 aaKnown RBP15.96■□□□□ 0.15
CLTA-208ENST00000493185 PRR25Q96S07 402 aa15.96■□□□□ 0.15
CLTA-208ENST00000493185 CABLES2Q9BTV7 478 aa15.96■□□□□ 0.15
CLTA-208ENST00000493185 TOLLIPQ9H0E2 274 aa15.96■□□□□ 0.15
CLTA-208ENST00000493185 MFNGO00587 321 aa15.95■□□□□ 0.14
CLTA-208ENST00000493185 DIRAS3O95661 229 aa15.95■□□□□ 0.14
CLTA-208ENST00000493185 CA2P00918 260 aa15.95■□□□□ 0.14
CLTA-208ENST00000493185 EGR2P11161 476 aaPredicted RBP15.95■□□□□ 0.14
CLTA-208ENST00000493185 HIST1H1DP16402 221 aaKnown RBP15.95■□□□□ 0.14
CLTA-208ENST00000493185 LINC00205P59089 165 aa15.95■□□□□ 0.14
CLTA-208ENST00000493185 AKIRIN2Q53H80 203 aa15.95■□□□□ 0.14
CLTA-208ENST00000493185 C22orf42Q6IC83 251 aa15.95■□□□□ 0.14
CLTA-208ENST00000493185 CASTOR1Q8WTX7 329 aa15.95■□□□□ 0.14
CLTA-208ENST00000493185 FAM103A1Q9BTL3 118 aaKnown RBP15.95■□□□□ 0.14
CLTA-208ENST00000493185 OR2D2Q9H210 308 aa15.95■□□□□ 0.14
CLTA-208ENST00000493185 SLC35D1Q9NTN3 355 aa15.95■□□□□ 0.14
CLTA-208ENST00000493185 GAB2Q9UQC2 676 aa15.95■□□□□ 0.14
CLTA-208ENST00000493185 RAB27BO00194 218 aa15.94■□□□□ 0.14
CLTA-208ENST00000493185 OR8U9P0C7N5 309 aa15.94■□□□□ 0.14
CLTA-208ENST00000493185 GSTT2P0CG29 244 aa15.94■□□□□ 0.14
CLTA-208ENST00000493185 GSTT2BP0CG30 244 aa15.94■□□□□ 0.14
CLTA-208ENST00000493185 TALDO1P37837 337 aa15.94■□□□□ 0.14
CLTA-208ENST00000493185 ARFRP1Q13795 201 aa15.94■□□□□ 0.14
CLTA-208ENST00000493185 IGSF11Q5DX21 431 aa15.94■□□□□ 0.14
CLTA-208ENST00000493185 LFNGQ8NES3 379 aa15.94■□□□□ 0.14
CLTA-208ENST00000493185 ARPC1AQ92747 370 aa15.94■□□□□ 0.14
CLTA-208ENST00000493185 GINS4Q9BRT9 223 aa15.94■□□□□ 0.14
CLTA-208ENST00000493185 CENPOQ9BU64 300 aa15.94■□□□□ 0.14
CLTA-208ENST00000493185 ALX4Q9H161 411 aaPredicted RBP15.94■□□□□ 0.14
CLTA-208ENST00000493185 RBM7Q9Y580 266 aaKnown RBP15.94■□□□□ 0.14
CLTA-208ENST00000493185 SORL1Q92673 2214 aa15.93■□□□□ 0.14
CLTA-208ENST00000493185 TRBV6-7A0A0A0MS04 114 aa15.93■□□□□ 0.14
CLTA-208ENST00000493185 A0A0B4J203 849 aa15.93■□□□□ 0.14
CLTA-208ENST00000493185 LINC01619G3V211 115 aa15.93■□□□□ 0.14
CLTA-208ENST00000493185 OVOL1O14753 267 aa15.93■□□□□ 0.14
CLTA-208ENST00000493185 SLC25A17O43808 307 aa15.93■□□□□ 0.14
CLTA-208ENST00000493185 LGALS1P09382 135 aaKnown RBP15.93■□□□□ 0.14
CLTA-208ENST00000493185 CBX3Q13185 183 aa15.93■□□□□ 0.14
CLTA-208ENST00000493185 DCUN1D4Q92564 292 aa15.93■□□□□ 0.14
CLTA-208ENST00000493185 ATG5Q9H1Y0 275 aa15.93■□□□□ 0.14
CLTA-208ENST00000493185 SDHAF2Q9NX18 166 aa15.93■□□□□ 0.14
CLTA-208ENST00000493185 ZNF230Q9UIE0 474 aaPredicted RBP15.93■□□□□ 0.14
CLTA-208ENST00000493185 ZNF256Q9Y2P7 627 aaPredicted RBP15.93■□□□□ 0.14
CLTA-208ENST00000493185 PSMB9P28065 219 aa15.92■□□□□ 0.14
CLTA-208ENST00000493185 LGALS7P47929 136 aa15.92■□□□□ 0.14
CLTA-208ENST00000493185 TPPP2P59282 170 aa15.92■□□□□ 0.14
CLTA-208ENST00000493185 TAGLNQ01995 201 aaKnown RBP15.92■□□□□ 0.14
CLTA-208ENST00000493185 FXYD3Q14802 87 aa15.92■□□□□ 0.14
CLTA-208ENST00000493185 ARL6IP1Q15041 203 aa15.92■□□□□ 0.14
CLTA-208ENST00000493185 UBE2UQ5VVX9 321 aa15.92■□□□□ 0.14
CLTA-208ENST00000493185 ZNF429Q86V71 674 aa15.92■□□□□ 0.14
CLTA-208ENST00000493185 GRPEL2Q8TAA5 225 aa15.92■□□□□ 0.14
CLTA-208ENST00000493185 MAFIPQ8WZ33 124 aa15.92■□□□□ 0.14
CLTA-208ENST00000493185 Q9H521 79 aa15.92■□□□□ 0.14
CLTA-208ENST00000493185 SLA2Q9H6Q3 261 aa15.92■□□□□ 0.14
CLTA-208ENST00000493185 TPSG1Q9NRR2 321 aa15.92■□□□□ 0.14
CLTA-208ENST00000493185 LSM4Q9Y4Z0 139 aaKnown RBP15.92■□□□□ 0.14
CLTA-208ENST00000493185 CNIH1O95406 144 aa15.91■□□□□ 0.14
CLTA-208ENST00000493185 ATP6V1G2O95670 118 aa15.91■□□□□ 0.14
CLTA-208ENST00000493185 LY86O95711 162 aa15.91■□□□□ 0.14
CLTA-208ENST00000493185 SRSF7Q16629 238 aaKnown RBP eCLIP15.91■□□□□ 0.14
CLTA-208ENST00000493185 RTL8BQ17RB0 113 aa15.91■□□□□ 0.14
CLTA-208ENST00000493185 FCGR1BQ92637 280 aa15.91■□□□□ 0.14
CLTA-208ENST00000493185 HARBI1Q96MB7 349 aa15.91■□□□□ 0.14
CLTA-208ENST00000493185 MS4A10Q96PG2 267 aa15.91■□□□□ 0.14
CLTA-208ENST00000493185 DNAH9Q9NYC9 4486 aa15.9■□□□□ 0.14
CLTA-208ENST00000493185 IGHV4OR15-8A0A075B7B6 117 aa15.9■□□□□ 0.14
CLTA-208ENST00000493185 A0A087WW49 117 aa15.9■□□□□ 0.14
CLTA-208ENST00000493185 SMIM30A4D0T7 59 aa15.9■□□□□ 0.14
CLTA-208ENST00000493185 IGHV3-11P01762 117 aa15.9■□□□□ 0.14
CLTA-208ENST00000493185 NHLRC4P0CG21 123 aaPredicted RBP15.9■□□□□ 0.14
CLTA-208ENST00000493185 SLURP1P55000 103 aa15.9■□□□□ 0.14
CLTA-208ENST00000493185 Q6ZS49 121 aa15.9■□□□□ 0.14
CLTA-208ENST00000493185 NR2C2APQ86WQ0 139 aa15.9■□□□□ 0.14
CLTA-208ENST00000493185 SPARTQ8N0X7 666 aa15.9■□□□□ 0.14
CLTA-208ENST00000493185 DLX4Q92988 240 aaPredicted RBP15.9■□□□□ 0.14
CLTA-208ENST00000493185 NOTOA8MTQ0 251 aa15.89■□□□□ 0.13
CLTA-208ENST00000493185 SHOXO15266 292 aa15.89■□□□□ 0.13
CLTA-208ENST00000493185 SAP30O75446 220 aa15.89■□□□□ 0.13
CLTA-208ENST00000493185 TRGV3P03979 118 aa15.89■□□□□ 0.13
CLTA-208ENST00000493185 HSPB1P04792 205 aaKnown RBP15.89■□□□□ 0.13
CLTA-208ENST00000493185 RRASP10301 218 aa15.89■□□□□ 0.13
CLTA-208ENST00000493185 SNRPBP14678 240 aaKnown RBP15.89■□□□□ 0.13
CLTA-208ENST00000493185 DTYMKP23919 212 aa15.89■□□□□ 0.13
CLTA-208ENST00000493185 FGF9P31371 208 aaPredicted RBP15.89■□□□□ 0.13
CLTA-208ENST00000493185 ADTRPQ96IZ2 230 aa15.89■□□□□ 0.13
CLTA-208ENST00000493185 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.89■□□□□ 0.13
CLTA-208ENST00000493185 ZNF355PQ9NSJ1 428 aa15.89■□□□□ 0.13
CLTA-208ENST00000493185 TXNL4BQ9NX01 149 aaKnown RBP15.89■□□□□ 0.13
CLTA-208ENST00000493185 STUB1Q9UNE7 303 aa15.89■□□□□ 0.13
CLTA-208ENST00000493185 ARPC1BO15143 372 aaKnown RBP15.88■□□□□ 0.13
CLTA-208ENST00000493185 IGLV2-23P01705 113 aa15.88■□□□□ 0.13
CLTA-208ENST00000493185 H1FOOQ8IZA3 346 aaPredicted RBP15.88■□□□□ 0.13
CLTA-208ENST00000493185 POC5Q8NA72 575 aa15.88■□□□□ 0.13
CLTA-208ENST00000493185 BVESQ8NE79 360 aa15.88■□□□□ 0.13
CLTA-208ENST00000493185 WWC2-AS2Q96NR7 200 aa15.88■□□□□ 0.13
CLTA-208ENST00000493185 YTHDF1Q9BYJ9 559 aaKnown RBP15.88■□□□□ 0.13
CLTA-208ENST00000493185 SSR3Q9UNL2 185 aa15.88■□□□□ 0.13
CLTA-208ENST00000493185 H3BUA1 57 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms