RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 CLEC9AQ6UXN8 241 aa11.58□□□□□ -0.56
PTPN7-216ENST00000492977 EIF4E3Q8N5X7 224 aaKnown RBP11.58□□□□□ -0.56
PTPN7-216ENST00000492977 ZNF439Q8NDP4 499 aa11.58□□□□□ -0.56
PTPN7-216ENST00000492977 BARX1Q9HBU1 254 aaPredicted RBP11.58□□□□□ -0.56
PTPN7-216ENST00000492977 WFDC1Q9HC57 220 aa11.58□□□□□ -0.56
PTPN7-216ENST00000492977 C19orf12Q9NSK7 152 aa11.58□□□□□ -0.56
PTPN7-216ENST00000492977 PRELID3BQ9Y3B1 194 aa11.58□□□□□ -0.56
PTPN7-216ENST00000492977 SLC31A2O15432 143 aa11.57□□□□□ -0.56
PTPN7-216ENST00000492977 NXPH3O95157 252 aa11.57□□□□□ -0.56
PTPN7-216ENST00000492977 HPRT1P00492 218 aa11.57□□□□□ -0.56
PTPN7-216ENST00000492977 NFYBP25208 207 aa11.57□□□□□ -0.56
PTPN7-216ENST00000492977 PLA2G5P39877 138 aa11.57□□□□□ -0.56
PTPN7-216ENST00000492977 LYPD2Q6UXB3 125 aa11.57□□□□□ -0.56
PTPN7-216ENST00000492977 HSD17B13Q7Z5P4 300 aaPredicted RBP11.57□□□□□ -0.56
PTPN7-216ENST00000492977 SAT2Q96F10 170 aaPredicted RBP11.57□□□□□ -0.56
PTPN7-216ENST00000492977 SMIM8Q96KF7 97 aa11.57□□□□□ -0.56
PTPN7-216ENST00000492977 ZNF714Q96N38 554 aa11.57□□□□□ -0.56
PTPN7-216ENST00000492977 GINS3Q9BRX5 216 aa11.57□□□□□ -0.56
PTPN7-216ENST00000492977 RAB1BQ9H0U4 201 aa11.57□□□□□ -0.56
PTPN7-216ENST00000492977 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.57□□□□□ -0.56
PTPN7-216ENST00000492977 CBLN4Q9NTU7 201 aa11.57□□□□□ -0.56
PTPN7-216ENST00000492977 SESN1Q9Y6P5 492 aa11.57□□□□□ -0.56
PTPN7-216ENST00000492977 ANKHD1Q8IWZ3 2542 aaKnown RBP11.56□□□□□ -0.56
PTPN7-216ENST00000492977 NBASA2RRP1 2371 aa11.56□□□□□ -0.56
PTPN7-216ENST00000492977 I3L521 148 aa11.56□□□□□ -0.56
PTPN7-216ENST00000492977 DVL1O14640 695 aa11.56□□□□□ -0.56
PTPN7-216ENST00000492977 MED6O75586 246 aa11.56□□□□□ -0.56
PTPN7-216ENST00000492977 FCN3O75636 299 aa11.56□□□□□ -0.56
PTPN7-216ENST00000492977 IGHV3-7P01780 117 aa11.56□□□□□ -0.56
PTPN7-216ENST00000492977 DAOP14920 347 aa11.56□□□□□ -0.56
PTPN7-216ENST00000492977 GNLYP22749 145 aa11.56□□□□□ -0.56
PTPN7-216ENST00000492977 ARHGDIBP52566 201 aa11.56□□□□□ -0.56
PTPN7-216ENST00000492977 ZNF266Q14584 549 aa11.56□□□□□ -0.56
PTPN7-216ENST00000492977 ZNF273Q14593 569 aa11.56□□□□□ -0.56
PTPN7-216ENST00000492977 RPL39P5Q59GN2 51 aa11.56□□□□□ -0.56
PTPN7-216ENST00000492977 TMEM200BQ69YZ2 307 aa11.56□□□□□ -0.56
PTPN7-216ENST00000492977 HEPN1Q6WQI6 88 aa11.56□□□□□ -0.56
PTPN7-216ENST00000492977 SLC25A48Q6ZT89 311 aaKnown RBP11.56□□□□□ -0.56
PTPN7-216ENST00000492977 H2BFWTQ7Z2G1 175 aa11.56□□□□□ -0.56
PTPN7-216ENST00000492977 ITLN2Q8WWU7 325 aaPredicted RBP11.56□□□□□ -0.56
PTPN7-216ENST00000492977 LEAP2Q969E1 77 aa11.56□□□□□ -0.56
PTPN7-216ENST00000492977 ADTRPQ96IZ2 230 aa11.56□□□□□ -0.56
PTPN7-216ENST00000492977 S1PR3Q99500 378 aa11.56□□□□□ -0.56
PTPN7-216ENST00000492977 ZZEF1O43149 2961 aa11.55□□□□□ -0.56
PTPN7-216ENST00000492977 FAM90A9PA6NNJ1 464 aa11.55□□□□□ -0.56
PTPN7-216ENST00000492977 TXNL1O43396 289 aa11.55□□□□□ -0.56
PTPN7-216ENST00000492977 ZG16O60844 167 aa11.55□□□□□ -0.56
PTPN7-216ENST00000492977 MMP23AO75900 390 aa11.55□□□□□ -0.56
PTPN7-216ENST00000492977 SEC11BP0C7V7 166 aa11.55□□□□□ -0.56
PTPN7-216ENST00000492977 COL8A2P25067 703 aa11.55□□□□□ -0.56
PTPN7-216ENST00000492977 SULT1A2P50226 295 aa11.55□□□□□ -0.56
PTPN7-216ENST00000492977 LINC00205P59089 165 aa11.55□□□□□ -0.56
PTPN7-216ENST00000492977 MRPS11P82912 194 aaKnown RBP11.55□□□□□ -0.56
PTPN7-216ENST00000492977 MIDNQ504T8 468 aa11.55□□□□□ -0.56
PTPN7-216ENST00000492977 TOR2AQ5JU69 321 aa11.55□□□□□ -0.56
PTPN7-216ENST00000492977 UTF1Q5T230 341 aa11.55□□□□□ -0.56
PTPN7-216ENST00000492977 PRAMEF5Q5TYX0 476 aa11.55□□□□□ -0.56
PTPN7-216ENST00000492977 STX12Q86Y82 276 aa11.55□□□□□ -0.56
PTPN7-216ENST00000492977 ODF3L1Q8IXM7 274 aa11.55□□□□□ -0.56
PTPN7-216ENST00000492977 DDB2Q92466 427 aa11.55□□□□□ -0.56
PTPN7-216ENST00000492977 RAB39BQ96DA2 213 aa11.55□□□□□ -0.56
PTPN7-216ENST00000492977 CTSZQ9UBR2 303 aa11.55□□□□□ -0.56
PTPN7-216ENST00000492977 HSPB7Q9UBY9 170 aa11.55□□□□□ -0.56
PTPN7-216ENST00000492977 SAA2-SAA4A0A096LPE2 208 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 MARCH11A6NNE9 402 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 A8MXK9 166 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 B8ZZF3 427 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 FCGR3BO75015 233 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 FBXO24O75426 580 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 FGF2P09038 288 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 SAA2P0DJI9 122 aaPredicted RBP11.54□□□□□ -0.56
PTPN7-216ENST00000492977 SPP1P10451 314 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 UQCRFS1P47985 274 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 THBS3P49746 956 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 SULT1A1P50225 295 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 UBE2KP61086 200 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 TNFRSF9Q07011 255 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 C11orf71Q6IPW1 123 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 LYG1Q8N1E2 194 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 H1FXQ92522 213 aaKnown RBP11.54□□□□□ -0.56
PTPN7-216ENST00000492977 R3HDM4Q96D70 268 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 ZNF251Q9BRH9 671 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 PSENENQ9NZ42 101 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 YLPM1P49750 1951 aaKnown RBP11.54□□□□□ -0.56
PTPN7-216ENST00000492977 A0A1W2PPE3 182 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 ZNF705EA8MWA4 302 aaPredicted RBP11.54□□□□□ -0.56
PTPN7-216ENST00000492977 NUDT19A8MXV4 375 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 CST7O76096 145 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 BLOC1S1P78537 153 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 OR5C1Q8NGR4 320 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 OR4S2Q8NH73 311 aa11.54□□□□□ -0.56
PTPN7-216ENST00000492977 TPRP12270 2363 aaKnown RBP11.53□□□□□ -0.56
PTPN7-216ENST00000492977 TRBV23-1A0A0A0MS06 115 aa11.53□□□□□ -0.56
PTPN7-216ENST00000492977 DFFBO76075 338 aa11.53□□□□□ -0.56
PTPN7-216ENST00000492977 IGHV2-70P01814 119 aa11.53□□□□□ -0.56
PTPN7-216ENST00000492977 NQO2P16083 231 aa11.53□□□□□ -0.56
PTPN7-216ENST00000492977 GNG10P50151 68 aa11.53□□□□□ -0.56
PTPN7-216ENST00000492977 DYNLT3P51808 116 aa11.53□□□□□ -0.56
PTPN7-216ENST00000492977 ERVK-16P61578 105 aa11.53□□□□□ -0.56
PTPN7-216ENST00000492977 CLINT1Q14677 625 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms