RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 OVCH2Q7RTZ1 564 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 MOB3BQ86TA1 216 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 MRPL52Q86TS9 123 aaKnown RBP7.18□□□□□ -1.26
HDAC3-212ENST00000492407 SELENOHQ8IZQ5 122 aaKnown RBP7.18□□□□□ -1.26
HDAC3-212ENST00000492407 FAM89BQ8N5H3 189 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 OR5M8Q8NGP6 311 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 RFESDQ8TAC1 157 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 PLPPR1Q8TBJ4 325 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 AP3S1Q92572 193 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 TMEM203Q969S6 136 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 ST6GALNAC6Q969X2 333 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 MRPS24Q96EL2 167 aaKnown RBP7.18□□□□□ -1.26
HDAC3-212ENST00000492407 PACRGQ96M98 296 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-212ENST00000492407 NOL4LQ96MY1 436 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-212ENST00000492407 S100A13Q99584 98 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 RASL11BQ9BPW5 248 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 PDCD1LG2Q9BQ51 273 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 ISG20L2Q9H9L3 353 aaKnown RBP7.18□□□□□ -1.26
HDAC3-212ENST00000492407 LSM4Q9Y4Z0 139 aaKnown RBP7.18□□□□□ -1.26
HDAC3-212ENST00000492407 IRGMA1A4Y4 181 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 NCBP2LA6PVI3 153 aaKnown RBP7.17□□□□□ -1.26
HDAC3-212ENST00000492407 C15orf65H3BRN8 121 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 HSPB6O14558 160 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 DLEU1O43261 78 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 WBP4O75554 376 aaKnown RBP7.17□□□□□ -1.26
HDAC3-212ENST00000492407 OR7C1O76099 320 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-212ENST00000492407 IGHG4P01861 327 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 MT-ND4P03905 459 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 NBEAP1P0C6P0 100 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 GTF2F2P13984 249 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 SSTR5P35346 364 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 ZNF93P35789 620 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-212ENST00000492407 ARL3P36405 182 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 ELLP55199 621 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-212ENST00000492407 RBM11P57052 281 aaKnown RBP7.17□□□□□ -1.26
HDAC3-212ENST00000492407 UBE2G2P60604 165 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 PPP3R1P63098 170 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 GPR50Q13585 617 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 DIAPH2-AS1Q14236 149 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 BAK1Q16611 211 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 BSXQ3C1V8 233 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 PIGYQ3MUY2 71 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 ZNF497Q6ZNH5 498 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 PACRGLQ8N7B6 248 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 Q8N9W7 124 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 DMBX1Q8NFW5 382 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 OR51A2Q8NGJ7 313 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 NEK7Q8TDX7 302 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 RTN4IP1Q8WWV3 396 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-212ENST00000492407 LEAP2Q969E1 77 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 ARL11Q969Q4 196 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 NUDT11Q96G61 164 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 RAX2Q96IS3 184 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 S1PR3Q99500 378 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 VCX2Q9H322 139 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 AUNIPQ9H7T9 357 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 FGF20Q9NP95 211 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-212ENST00000492407 PLSCR3Q9NRY6 295 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 MCUBQ9NWR8 336 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 GFOD1Q9NXC2 390 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 COPZ2Q9P299 210 aa7.17□□□□□ -1.26
HDAC3-212ENST00000492407 FAM90A10PA6NDY2 464 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 FAM90A7PA6NKC0 464 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 FAM90A23PA8MXZ1 464 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 SDCBPO00560 298 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-212ENST00000492407 SPINT2O43291 252 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 LIMS3P0CW19 117 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 LIMS4P0CW20 117 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 VDAC1P21796 283 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 MAS1LP35410 378 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 CFHR3Q02985 330 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 FGL1Q08830 312 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 FHL3Q13643 280 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 MED22Q15528 200 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 AKIRIN2Q53H80 203 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 CLLU1Q5K131 121 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 SPANXN2Q5MJ10 180 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 LY6G6FQ5SQ64 297 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 TMPRSS11AQ6ZMR5 421 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 SLC25A48Q6ZT89 311 aaKnown RBP7.16□□□□□ -1.26
HDAC3-212ENST00000492407 NOXA1Q86UR1 476 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 GAPTQ8N292 157 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 CBR4Q8N4T8 237 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 FAM71E2Q8N5Q1 922 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 OR52I1Q8NGK6 324 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 C4orf3Q8WVX3 66 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 PHYHIPQ92561 330 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 TMEM106AQ96A25 262 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 ISOC1Q96CN7 298 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 OR14A2Q96R54 314 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 RSRP1Q9BUV0 290 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 GGACTQ9BVM4 153 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 TAS2R4Q9NYW5 299 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 RCC2Q9P258 522 aaKnown RBP7.16□□□□□ -1.26
HDAC3-212ENST00000492407 ADAM30Q9UKF2 790 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 ING4Q9UNL4 249 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 U3KQK5 164 aa7.16□□□□□ -1.26
HDAC3-212ENST00000492407 DNAH9Q9NYC9 4486 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 LOC100130705A0A1B0GUX0 176 aa7.15□□□□□ -1.26
HDAC3-212ENST00000492407 LINC01548A6NM66 108 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms