RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 TAS2R46P59540 309 aa12.87□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 TAGLNQ01995 201 aaKnown RBP12.87□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 CBX3Q13185 183 aa12.87□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 C5orf64Q2M2E5 130 aa12.87□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 OR5AU1Q8NGC0 362 aa12.87□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 OR5H2Q8NGV7 314 aa12.87□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 CHPT1Q8WUD6 406 aa12.87□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 C15orf40Q8WUR7 153 aa12.87□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 GIMAP1Q8WWP7 306 aa12.87□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 HSPB9Q9BQS6 159 aa12.87□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 SLIRPQ9GZT3 109 aaKnown RBP12.87□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 C6orf62Q9GZU0 229 aaPredicted RBP12.87□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 RSL24D1Q9UHA3 163 aaKnown RBP12.87□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 RBMX2Q9Y388 322 aaKnown RBP12.87□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 AP4M1O00189 453 aa12.86□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 RRHO14718 337 aa12.86□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 PMP2P02689 132 aa12.86□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 RRASP10301 218 aa12.86□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 RPS16P62249 146 aaKnown RBP12.86□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 RTL8BQ17RB0 113 aa12.86□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 RNASE12Q5GAN4 147 aaKnown RBP12.86□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 PRR31Q5SQ13 230 aa12.86□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 HIST2H2BDQ6DRA6 164 aa12.86□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 OVCH2Q7RTZ1 564 aa12.86□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 SECTM1Q8WVN6 248 aa12.86□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 DDB2Q92466 427 aa12.86□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 FLYWCH2Q96CP2 140 aaKnown RBP12.86□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 NOL4LQ96MY1 436 aaPredicted RBP12.86□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 TSNAXQ99598 290 aaKnown RBP12.86□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 ZNF107Q9UII5 783 aaPredicted RBP12.86□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 PSMB11A5LHX3 300 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 LINC01548A6NM66 108 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 LINC00473A8K010 186 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 ZNF701M0R085 212 aaPredicted RBP12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 SPDEFO95238 335 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 IGLV2-14P01704 120 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 HLA-DRB1P01911 266 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 HLA-DMAP28067 261 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 HRH1P35367 487 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 RFX2P48378 723 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 FXYD4P59646 89 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 HERV-K104P61576 105 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 DYRK1AQ13627 763 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 PLGLAQ15195 96 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 MSMO1Q15800 293 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 C2orf68Q2NKX9 166 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 STPG2Q8N412 459 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 BVESQ8NE79 360 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 OR4X2Q8NGF9 303 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 MCFD2Q8NI22 146 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 ABHD1Q96SE0 405 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 FBXL15Q9H469 300 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 LINC00527Q9UJ94 153 aa12.85□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 TET2Q6N021 2002 aaPredicted RBP12.84□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 PSG5Q15238 335 aa12.84□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 LIN54Q6MZP7 749 aa12.84□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 C10orf99Q6UWK7 81 aa12.84□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 KCTD9Q7L273 389 aa12.84□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 LYSMD2Q8IV50 215 aa12.84□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 OR52I2Q8NH67 350 aa12.84□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 DIRAS2Q96HU8 199 aa12.84□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 HARBI1Q96MB7 349 aa12.84□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 HSD17B10Q99714 261 aaKnown RBP12.84□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 CITED2Q99967 270 aaPredicted RBP12.84□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 ZNF2Q9BSG1 426 aaPredicted RBP12.84□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 DCUN1D5Q9BTE7 237 aa12.84□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 SLC5A7Q9GZV3 580 aa12.84□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 NXF2Q9GZY0 626 aaKnown RBP12.84□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 METTL1Q9UBP6 276 aaKnown RBP12.84□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 PRELID3BQ9Y3B1 194 aa12.84□□□□□ -0.35
MSH5-SAPCD1-206ENST00000491552 IGHV7-81A0A0B4J1V7 117 aa12.83□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 LGALS7P47929 136 aa12.83□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 SLC35B1P78383 322 aa12.83□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 EIF4EBP1Q13541 118 aaPredicted RBP12.83□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 TMEM177Q53S58 311 aa12.83□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 ACTBL2Q562R1 376 aa12.83□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 ZNF660Q6AZW8 331 aaPredicted RBP12.83□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 DHRS11Q6UWP2 260 aa12.83□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 ZNF329Q86UD4 541 aa12.83□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 TMEM17Q86X19 198 aa12.83□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 NDUFA11Q86Y39 141 aa12.83□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 ZBTB34Q8NCN2 500 aa12.83□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 OR51J1Q9H342 316 aa12.83□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 CCL28Q9NRJ3 127 aa12.83□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 RABL2AQ9UBK7 228 aaPredicted RBP12.83□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 RABL2BQ9UNT1 228 aa12.83□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 SHOXO15266 292 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 SLC25A17O43808 307 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 CRYZL1O95825 349 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 TSPAN15O95858 294 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 OPN1MWP04001 364 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 IGF1P05019 195 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 CSF1P09603 554 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 OPN1MW2P0DN77 364 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 OPN1MW3P0DN78 364 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 RPL30P62888 115 aaKnown RBP12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 MRPS10P82664 201 aaKnown RBP12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 CD83Q01151 205 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 NSUN5P1Q3KNT7 163 aa12.82□□□□□ -0.36
MSH5-SAPCD1-206ENST00000491552 TCTEX1D4Q5JR98 221 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms