RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 CFHR3Q02985 330 aa12.95□□□□□ -0.34
PDLIM2-217ENST00000491330 RTL8BQ17RB0 113 aa12.95□□□□□ -0.34
PDLIM2-217ENST00000491330 ACTBL2Q562R1 376 aa12.95□□□□□ -0.34
PDLIM2-217ENST00000491330 GLDNQ6ZMI3 551 aaPredicted RBP12.95□□□□□ -0.34
PDLIM2-217ENST00000491330 C5orf24Q7Z6I8 188 aa12.95□□□□□ -0.34
PDLIM2-217ENST00000491330 PPP1R27Q86WC6 154 aa12.95□□□□□ -0.34
PDLIM2-217ENST00000491330 NR2C2APQ86WQ0 139 aa12.95□□□□□ -0.34
PDLIM2-217ENST00000491330 ADTRPQ96IZ2 230 aa12.95□□□□□ -0.34
PDLIM2-217ENST00000491330 CABLES2Q9BTV7 478 aa12.95□□□□□ -0.34
PDLIM2-217ENST00000491330 SLA2Q9H6Q3 261 aa12.95□□□□□ -0.34
PDLIM2-217ENST00000491330 SLC35D1Q9NTN3 355 aa12.95□□□□□ -0.34
PDLIM2-217ENST00000491330 DAPK2Q9UIK4 370 aa12.95□□□□□ -0.34
PDLIM2-217ENST00000491330 GAB2Q9UQC2 676 aa12.95□□□□□ -0.34
PDLIM2-217ENST00000491330 A3GALT2U3KPV4 340 aa12.95□□□□□ -0.34
PDLIM2-217ENST00000491330 TRIM64CA6NLI5 447 aa12.94□□□□□ -0.34
PDLIM2-217ENST00000491330 G3V318 75 aa12.94□□□□□ -0.34
PDLIM2-217ENST00000491330 K7EIL1 84 aa12.94□□□□□ -0.34
PDLIM2-217ENST00000491330 OR8U9P0C7N5 309 aa12.94□□□□□ -0.34
PDLIM2-217ENST00000491330 CNTFRP26992 372 aa12.94□□□□□ -0.34
PDLIM2-217ENST00000491330 PPIFP30405 207 aaKnown RBP12.94□□□□□ -0.34
PDLIM2-217ENST00000491330 RUNX1Q01196 453 aa12.94□□□□□ -0.34
PDLIM2-217ENST00000491330 DEFB136Q30KP8 78 aa12.94□□□□□ -0.34
PDLIM2-217ENST00000491330 AKIRIN2Q53H80 203 aa12.94□□□□□ -0.34
PDLIM2-217ENST00000491330 UNQ5815/PRO19632Q6UWF5 114 aa12.94□□□□□ -0.34
PDLIM2-217ENST00000491330 ZNF491Q8N8L2 437 aa12.94□□□□□ -0.34
PDLIM2-217ENST00000491330 MINDY2Q8NBR6 621 aa12.94□□□□□ -0.34
PDLIM2-217ENST00000491330 TMEM68Q96MH6 324 aa12.94□□□□□ -0.34
PDLIM2-217ENST00000491330 CLCC1Q96S66 551 aa12.94□□□□□ -0.34
PDLIM2-217ENST00000491330 ZNF355PQ9NSJ1 428 aa12.94□□□□□ -0.34
PDLIM2-217ENST00000491330 KCNK7Q9Y2U2 307 aa12.94□□□□□ -0.34
PDLIM2-217ENST00000491330 LOC100506127A0A0U1RQW1 187 aa12.93□□□□□ -0.34
PDLIM2-217ENST00000491330 SLC22A5O76082 557 aa12.93□□□□□ -0.34
PDLIM2-217ENST00000491330 IGLV1-40P01703 118 aa12.93□□□□□ -0.34
PDLIM2-217ENST00000491330 GNB3P16520 340 aa12.93□□□□□ -0.34
PDLIM2-217ENST00000491330 KRTAP10-11P60412 298 aa12.93□□□□□ -0.34
PDLIM2-217ENST00000491330 PSG5Q15238 335 aa12.93□□□□□ -0.34
PDLIM2-217ENST00000491330 ZNF260Q3ZCT1 412 aa12.93□□□□□ -0.34
PDLIM2-217ENST00000491330 HACD4Q5VWC8 232 aa12.93□□□□□ -0.34
PDLIM2-217ENST00000491330 DRAXINQ8NBI3 349 aaPredicted RBP12.93□□□□□ -0.34
PDLIM2-217ENST00000491330 RITA1Q96K30 269 aa12.93□□□□□ -0.34
PDLIM2-217ENST00000491330 TRBV6-7A0A0A0MS04 114 aa12.92□□□□□ -0.34
PDLIM2-217ENST00000491330 A0A0G2JLM5 398 aa12.92□□□□□ -0.34
PDLIM2-217ENST00000491330 WI2-2373I1.2A0A1W2PRP0 233 aa12.92□□□□□ -0.34
PDLIM2-217ENST00000491330 AIREO43918 545 aa12.92□□□□□ -0.34
PDLIM2-217ENST00000491330 CREBL2O60519 120 aaPredicted RBP12.92□□□□□ -0.34
PDLIM2-217ENST00000491330 ECI1P42126 302 aa12.92□□□□□ -0.34
PDLIM2-217ENST00000491330 CRIP2P52943 208 aaPredicted RBP12.92□□□□□ -0.34
PDLIM2-217ENST00000491330 MOGAT2Q3SYC2 334 aa12.92□□□□□ -0.34
PDLIM2-217ENST00000491330 VAX1Q5SQQ9 334 aa12.92□□□□□ -0.34
PDLIM2-217ENST00000491330 ZNF429Q86V71 674 aa12.92□□□□□ -0.34
PDLIM2-217ENST00000491330 ARPC1AQ92747 370 aa12.92□□□□□ -0.34
PDLIM2-217ENST00000491330 OR5B12Q96R08 314 aa12.92□□□□□ -0.34
PDLIM2-217ENST00000491330 OR2D2Q9H210 308 aa12.92□□□□□ -0.34
PDLIM2-217ENST00000491330 RHBDL2Q9NX52 303 aa12.92□□□□□ -0.34
PDLIM2-217ENST00000491330 SPATA2Q9UM82 520 aa12.92□□□□□ -0.34
PDLIM2-217ENST00000491330 LINC01619G3V211 115 aa12.91□□□□□ -0.34
PDLIM2-217ENST00000491330 SHOXO15266 292 aa12.91□□□□□ -0.34
PDLIM2-217ENST00000491330 ACTL6BO94805 426 aa12.91□□□□□ -0.34
PDLIM2-217ENST00000491330 LY86O95711 162 aa12.91□□□□□ -0.34
PDLIM2-217ENST00000491330 GSTT2P0CG29 244 aa12.91□□□□□ -0.34
PDLIM2-217ENST00000491330 GSTT2BP0CG30 244 aa12.91□□□□□ -0.34
PDLIM2-217ENST00000491330 FXYD3Q14802 87 aa12.91□□□□□ -0.34
PDLIM2-217ENST00000491330 VMA21Q3ZAQ7 101 aa12.91□□□□□ -0.34
PDLIM2-217ENST00000491330 LGALS14Q8TCE9 139 aa12.91□□□□□ -0.34
PDLIM2-217ENST00000491330 KCTD12Q96CX2 325 aaKnown RBP12.91□□□□□ -0.34
PDLIM2-217ENST00000491330 YIPF6Q96EC8 236 aa12.91□□□□□ -0.34
PDLIM2-217ENST00000491330 PARP12Q9H0J9 701 aaKnown RBP12.91□□□□□ -0.34
PDLIM2-217ENST00000491330 KLK15Q9H2R5 256 aa12.91□□□□□ -0.34
PDLIM2-217ENST00000491330 DIABLOQ9NR28 239 aa12.91□□□□□ -0.34
PDLIM2-217ENST00000491330 NUBP2Q9Y5Y2 271 aa12.91□□□□□ -0.34
PDLIM2-217ENST00000491330 TGP01266 2768 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 C13orf42A0A1B0GVH6 325 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 H3BUA1 57 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 I3L521 148 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 OVOL1O14753 267 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 CA2P00918 260 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 NHLRC4P0CG21 123 aaPredicted RBP12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 TPPP2P59282 170 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 GNG2P59768 71 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 GNB1P62873 340 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 PLA2G7Q13093 441 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 FHL3Q13643 280 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 CDNFQ49AH0 187 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 ZNF383Q8NA42 475 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 LFNGQ8NES3 379 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 GRPEL2Q8TAA5 225 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 MYOZ3Q8TDC0 251 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 HARBI1Q96MB7 349 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 B9D2Q9BPU9 175 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 ST6GALNAC5Q9BVH7 336 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 ELOVL1Q9BW60 279 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 PRELID3BQ9Y3B1 194 aa12.9□□□□□ -0.34
PDLIM2-217ENST00000491330 SLC25A17O43808 307 aa12.89□□□□□ -0.35
PDLIM2-217ENST00000491330 TRGV3P03979 118 aa12.89□□□□□ -0.35
PDLIM2-217ENST00000491330 LGALS1P09382 135 aaKnown RBP12.89□□□□□ -0.35
PDLIM2-217ENST00000491330 LUMP51884 338 aaPredicted RBP12.89□□□□□ -0.35
PDLIM2-217ENST00000491330 MXD1Q05195 221 aa12.89□□□□□ -0.35
PDLIM2-217ENST00000491330 TATDN3Q17R31 274 aa12.89□□□□□ -0.35
PDLIM2-217ENST00000491330 IGSF11Q5DX21 431 aa12.89□□□□□ -0.35
PDLIM2-217ENST00000491330 IDNKQ5T6J7 187 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms