RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 GADD45AP24522 165 aa13.95□□□□□ -0.18
HMGN1-219ENST00000491183 FGF9P31371 208 aaPredicted RBP13.95□□□□□ -0.18
HMGN1-219ENST00000491183 ZNF616Q08AN1 781 aa13.95□□□□□ -0.18
HMGN1-219ENST00000491183 C11orf87Q6NUJ2 197 aa13.95□□□□□ -0.18
HMGN1-219ENST00000491183 ZNF562Q6V9R5 426 aa13.95□□□□□ -0.18
HMGN1-219ENST00000491183 PPP1R27Q86WC6 154 aa13.95□□□□□ -0.18
HMGN1-219ENST00000491183 PDPNQ86YL7 162 aa13.95□□□□□ -0.18
HMGN1-219ENST00000491183 OR10J5Q8NHC4 309 aa13.95□□□□□ -0.18
HMGN1-219ENST00000491183 C5orf30Q96GV9 206 aa13.95□□□□□ -0.18
HMGN1-219ENST00000491183 TSNAXQ99598 290 aaKnown RBP13.95□□□□□ -0.18
HMGN1-219ENST00000491183 ALX4Q9H161 411 aaPredicted RBP13.95□□□□□ -0.18
HMGN1-219ENST00000491183 TPSG1Q9NRR2 321 aa13.95□□□□□ -0.18
HMGN1-219ENST00000491183 TXNL4BQ9NX01 149 aaKnown RBP13.95□□□□□ -0.18
HMGN1-219ENST00000491183 SDHAF2Q9NX18 166 aa13.95□□□□□ -0.18
HMGN1-219ENST00000491183 IGKV1D-8A0A087WSZ0 117 aa13.94□□□□□ -0.18
HMGN1-219ENST00000491183 METTL21EPA6NDL7 271 aa13.94□□□□□ -0.18
HMGN1-219ENST00000491183 SPDEFO95238 335 aa13.94□□□□□ -0.18
HMGN1-219ENST00000491183 CA2P00918 260 aa13.94□□□□□ -0.18
HMGN1-219ENST00000491183 OR8U8P0C7N1 319 aa13.94□□□□□ -0.18
HMGN1-219ENST00000491183 PSMB9P28065 219 aa13.94□□□□□ -0.18
HMGN1-219ENST00000491183 TMEM267Q0VDI3 215 aaPredicted RBP13.94□□□□□ -0.18
HMGN1-219ENST00000491183 ZNF260Q3ZCT1 412 aa13.94□□□□□ -0.18
HMGN1-219ENST00000491183 AKIRIN2Q53H80 203 aa13.94□□□□□ -0.18
HMGN1-219ENST00000491183 TCTEX1D1Q8N7M0 179 aa13.94□□□□□ -0.18
HMGN1-219ENST00000491183 LFNGQ8NES3 379 aa13.94□□□□□ -0.18
HMGN1-219ENST00000491183 ABHD5Q8WTS1 349 aa13.94□□□□□ -0.18
HMGN1-219ENST00000491183 DCUN1D4Q92564 292 aa13.94□□□□□ -0.18
HMGN1-219ENST00000491183 FLYWCH2Q96CP2 140 aaKnown RBP13.94□□□□□ -0.18
HMGN1-219ENST00000491183 B9D2Q9BPU9 175 aa13.94□□□□□ -0.18
HMGN1-219ENST00000491183 ATG5Q9H1Y0 275 aa13.94□□□□□ -0.18
HMGN1-219ENST00000491183 OR2D2Q9H210 308 aa13.94□□□□□ -0.18
HMGN1-219ENST00000491183 SLC35D1Q9NTN3 355 aa13.94□□□□□ -0.18
HMGN1-219ENST00000491183 COL7A1Q02388 2944 aa13.94□□□□□ -0.18
HMGN1-219ENST00000491183 ARPC1BO15143 372 aaKnown RBP13.93□□□□□ -0.18
HMGN1-219ENST00000491183 SLC25A17O43808 307 aa13.93□□□□□ -0.18
HMGN1-219ENST00000491183 DIRAS3O95661 229 aa13.93□□□□□ -0.18
HMGN1-219ENST00000491183 IGLV2-23P01705 113 aa13.93□□□□□ -0.18
HMGN1-219ENST00000491183 APOA2P02652 100 aa13.93□□□□□ -0.18
HMGN1-219ENST00000491183 CRYGBP07316 175 aa13.93□□□□□ -0.18
HMGN1-219ENST00000491183 ECI1P42126 302 aa13.93□□□□□ -0.18
HMGN1-219ENST00000491183 SSBP2P81877 361 aaPredicted RBP13.93□□□□□ -0.18
HMGN1-219ENST00000491183 ARFRP1Q13795 201 aa13.93□□□□□ -0.18
HMGN1-219ENST00000491183 SRSF7Q16629 238 aaKnown RBP eCLIP13.93□□□□□ -0.18
HMGN1-219ENST00000491183 VAX1Q5SQQ9 334 aa13.93□□□□□ -0.18
HMGN1-219ENST00000491183 UNQ5815/PRO19632Q6UWF5 114 aa13.93□□□□□ -0.18
HMGN1-219ENST00000491183 Q6ZS49 121 aa13.93□□□□□ -0.18
HMGN1-219ENST00000491183 PRR25Q96S07 402 aa13.93□□□□□ -0.18
HMGN1-219ENST00000491183 YTHDF1Q9BYJ9 559 aaKnown RBP13.93□□□□□ -0.18
HMGN1-219ENST00000491183 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.93□□□□□ -0.18
HMGN1-219ENST00000491183 STUB1Q9UNE7 303 aa13.93□□□□□ -0.18
HMGN1-219ENST00000491183 LSM4Q9Y4Z0 139 aaKnown RBP13.93□□□□□ -0.18
HMGN1-219ENST00000491183 DNAH9Q9NYC9 4486 aa13.92□□□□□ -0.18
HMGN1-219ENST00000491183 NOTOA8MTQ0 251 aa13.92□□□□□ -0.18
HMGN1-219ENST00000491183 CD69Q07108 199 aa13.92□□□□□ -0.18
HMGN1-219ENST00000491183 CDNFQ49AH0 187 aa13.92□□□□□ -0.18
HMGN1-219ENST00000491183 ACTBL2Q562R1 376 aa13.92□□□□□ -0.18
HMGN1-219ENST00000491183 MS4A10Q96PG2 267 aa13.92□□□□□ -0.18
HMGN1-219ENST00000491183 LGALS1P09382 135 aaKnown RBP13.91□□□□□ -0.18
HMGN1-219ENST00000491183 TALDO1P37837 337 aa13.91□□□□□ -0.18
HMGN1-219ENST00000491183 SLURP1P55000 103 aa13.91□□□□□ -0.18
HMGN1-219ENST00000491183 PJVKQ0ZLH3 352 aa13.91□□□□□ -0.18
HMGN1-219ENST00000491183 FXYD3Q14802 87 aa13.91□□□□□ -0.18
HMGN1-219ENST00000491183 TPRA1Q86W33 373 aa13.91□□□□□ -0.18
HMGN1-219ENST00000491183 H1FOOQ8IZA3 346 aaPredicted RBP13.91□□□□□ -0.18
HMGN1-219ENST00000491183 BVESQ8NE79 360 aa13.91□□□□□ -0.18
HMGN1-219ENST00000491183 FCGR1BQ92637 280 aa13.91□□□□□ -0.18
HMGN1-219ENST00000491183 ARPC1AQ92747 370 aa13.91□□□□□ -0.18
HMGN1-219ENST00000491183 DLX4Q92988 240 aaPredicted RBP13.91□□□□□ -0.18
HMGN1-219ENST00000491183 OR51E2Q9H255 320 aa13.91□□□□□ -0.18
HMGN1-219ENST00000491183 Q9H521 79 aa13.91□□□□□ -0.18
HMGN1-219ENST00000491183 IGHV4OR15-8A0A075B7B6 117 aa13.9□□□□□ -0.18
HMGN1-219ENST00000491183 A0A087WW49 117 aa13.9□□□□□ -0.18
HMGN1-219ENST00000491183 SRRM4A7MD48 611 aaKnown RBP13.9□□□□□ -0.18
HMGN1-219ENST00000491183 OVOL1O14753 267 aa13.9□□□□□ -0.18
HMGN1-219ENST00000491183 IGHV3-11P01762 117 aa13.9□□□□□ -0.18
HMGN1-219ENST00000491183 LGALS7P47929 136 aa13.9□□□□□ -0.18
HMGN1-219ENST00000491183 MRGPRG-AS1Q2M3A8 158 aa13.9□□□□□ -0.18
HMGN1-219ENST00000491183 TMEM177Q53S58 311 aa13.9□□□□□ -0.18
HMGN1-219ENST00000491183 PYHIN1Q6K0P9 492 aa13.9□□□□□ -0.18
HMGN1-219ENST00000491183 RHOVQ96L33 236 aa13.9□□□□□ -0.18
HMGN1-219ENST00000491183 GINS4Q9BRT9 223 aa13.9□□□□□ -0.18
HMGN1-219ENST00000491183 DAPK2Q9UIK4 370 aa13.9□□□□□ -0.18
HMGN1-219ENST00000491183 SSR3Q9UNL2 185 aa13.9□□□□□ -0.18
HMGN1-219ENST00000491183 LINC01619G3V211 115 aa13.89□□□□□ -0.19
HMGN1-219ENST00000491183 DTYMKP23919 212 aa13.89□□□□□ -0.19
HMGN1-219ENST00000491183 INSL3P51460 131 aa13.89□□□□□ -0.19
HMGN1-219ENST00000491183 TPPP2P59282 170 aa13.89□□□□□ -0.19
HMGN1-219ENST00000491183 DCTN2Q13561 401 aaKnown RBP13.89□□□□□ -0.19
HMGN1-219ENST00000491183 ARL6IP1Q15041 203 aa13.89□□□□□ -0.19
HMGN1-219ENST00000491183 HACD4Q5VWC8 232 aa13.89□□□□□ -0.19
HMGN1-219ENST00000491183 ZNF773Q6PK81 442 aa13.89□□□□□ -0.19
HMGN1-219ENST00000491183 GRPEL2Q8TAA5 225 aa13.89□□□□□ -0.19
HMGN1-219ENST00000491183 DDB2Q92466 427 aa13.89□□□□□ -0.19
HMGN1-219ENST00000491183 ST6GALNAC5Q9BVH7 336 aa13.89□□□□□ -0.19
HMGN1-219ENST00000491183 RNF167Q9H6Y7 350 aa13.89□□□□□ -0.19
HMGN1-219ENST00000491183 RRP15Q9Y3B9 282 aaKnown RBP13.89□□□□□ -0.19
HMGN1-219ENST00000491183 RBM7Q9Y580 266 aaKnown RBP13.89□□□□□ -0.19
HMGN1-219ENST00000491183 CLEC2LP0C7M8 214 aa13.88□□□□□ -0.19
HMGN1-219ENST00000491183 DUTP33316 252 aaKnown RBP13.88□□□□□ -0.19
HMGN1-219ENST00000491183 SDC2P34741 201 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms