RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 GNB1P62873 340 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 KIAA0141Q14154 515 aaPredicted RBP6.18□□□□□ -1.42
NPHP3-208ENST00000490993 ZNF273Q14593 569 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 SLC35E3Q7Z769 313 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 SPACA3Q8IXA5 215 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 NUP37Q8NFH4 326 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 OR1L4Q8NGR5 311 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 OR13D1Q8NGV5 346 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 TXNDC17Q9BRA2 123 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 CTDSP1Q9GZU7 261 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 RNF24Q9Y225 148 aa6.18□□□□□ -1.42
NPHP3-208ENST00000490993 TP53BP1Q12888 1972 aaPredicted RBP6.17□□□□□ -1.42
NPHP3-208ENST00000490993 C7orf77A4D0Y5 90 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 J3QR06 171 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 BCL2P10415 239 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 SRSF6Q13247 344 aaKnown RBP6.17□□□□□ -1.42
NPHP3-208ENST00000490993 TEPPQ6URK8 271 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 SLC24A4Q8NFF2 622 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 HARBI1Q96MB7 349 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 LRFN3Q9BTN0 628 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 GGACTQ9BVM4 153 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 SCNM1Q9BWG6 230 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 MS4A7Q9GZW8 240 aaPredicted RBP6.17□□□□□ -1.42
NPHP3-208ENST00000490993 NPVFQ9HCQ7 196 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 TMEM167BQ9NRX6 74 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 SDK2Q58EX2 2172 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 A0A1W2PNU3 283 aaPredicted RBP6.17□□□□□ -1.42
NPHP3-208ENST00000490993 MED19A0JLT2 244 aaPredicted RBP6.17□□□□□ -1.42
NPHP3-208ENST00000490993 RBFOX2O43251 390 aaKnown RBP eCLIP6.17□□□□□ -1.422e-10■■■■■ 36.9
NPHP3-208ENST00000490993 PDE6DO43924 150 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 CEACAM4O75871 244 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 HSPE1P61604 102 aaKnown RBP6.17□□□□□ -1.42
NPHP3-208ENST00000490993 RUNX1Q01196 453 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 PCSK4Q6UW60 755 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 PUSL1Q8N0Z8 303 aaKnown RBP6.17□□□□□ -1.42
NPHP3-208ENST00000490993 KDF1Q8NAX2 398 aaPredicted RBP6.17□□□□□ -1.42
NPHP3-208ENST00000490993 TMEM186Q96B77 213 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 OR4C12Q96R67 309 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 TMEM140Q9NV12 185 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 CISD1Q9NZ45 108 aaKnown RBP6.17□□□□□ -1.42
NPHP3-208ENST00000490993 C17orf100A8MU93 164 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 LILRA1O75019 489 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 S100A8P05109 93 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 OR10A7Q8NGE5 316 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 FRZBQ92765 325 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 VKORC1Q9BQB6 163 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 SH3BGRL3Q9H299 93 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 SERTAD4Q9NUC0 356 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 PROB1E7EW31 1015 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 OR7C2O60412 319 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 CHRNB4P30926 498 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 FGF8P55075 233 aaPredicted RBP6.17□□□□□ -1.42
NPHP3-208ENST00000490993 TBR1Q16650 682 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 GUCA2BQ16661 112 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 LRRC75BQ2VPJ9 315 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 TIGITQ495A1 244 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 ZNRF1Q8ND25 227 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 DAZAP1Q96EP5 407 aaKnown RBP6.17□□□□□ -1.42
NPHP3-208ENST00000490993 RHOVQ96L33 236 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 WDR61Q9GZS3 305 aaKnown RBP6.17□□□□□ -1.42
NPHP3-208ENST00000490993 URGCP-MRPS24S4R325 110 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 PCDH15Q96QU1 1955 aa6.17□□□□□ -1.42
NPHP3-208ENST00000490993 H3BQ15 152 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 CXorf1O96002 111 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 LMO1P25800 156 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 BSPH1Q075Z2 132 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 NMSQ5H8A3 153 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 ZNF880Q6PDB4 577 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 ZNF596Q8TC21 504 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 TMEM204Q9BSN7 226 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 MRPL37Q9BZE1 423 aaKnown RBP6.16□□□□□ -1.42
NPHP3-208ENST00000490993 HES4Q9HCC6 221 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 TECRQ9NZ01 308 aaKnown RBP6.16□□□□□ -1.42
NPHP3-208ENST00000490993 LINC00312Q9Y6C7 94 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 COL5A1P20908 1838 aaPredicted RBP6.16□□□□□ -1.42
NPHP3-208ENST00000490993 A0A0U1RQK1 487 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 ZNF503-AS2A6NEH8 195 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 OPN1MWP04001 364 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 OPN1MW2P0DN77 364 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 OPN1MW3P0DN78 364 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 OPRK1P41145 380 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 ERVFRD-1P60508 538 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 DLK1P80370 383 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 ANAPC16Q96DE5 110 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 ACY3Q96HD9 319 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 TMEM68Q96MH6 324 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 CHRDL1Q9BU40 450 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 TMEM106BQ9NUM4 274 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 WASHC3Q9Y3C0 194 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 G3V3Q6 166 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 K7EQM0 130 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 ZG16O60844 167 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 BORCS7Q96B45 105 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 RSG1Q9BU20 258 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 REG4Q9BYZ8 158 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 TLNRD1Q9H1K6 362 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 SEBOXQ9HB31 216 aaPredicted RBP6.16□□□□□ -1.42
NPHP3-208ENST00000490993 MBNL3Q9NUK0 354 aaKnown RBP6.16□□□□□ -1.42
NPHP3-208ENST00000490993 ZNF581Q9P0T4 197 aa6.16□□□□□ -1.42
NPHP3-208ENST00000490993 IGHV1-69-2A0A0G2JMI3 117 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms