RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 IL6RP08887 468 aaPredicted RBP16.31■□□□□ 0.2
SNAPC3-206ENST00000490969 DEFA4P12838 97 aa16.31■□□□□ 0.2
SNAPC3-206ENST00000490969 GNB1P62873 340 aa16.31■□□□□ 0.2
SNAPC3-206ENST00000490969 TFF3Q07654 80 aa16.31■□□□□ 0.2
SNAPC3-206ENST00000490969 TRA2AQ13595 282 aaKnown RBP eCLIP16.31■□□□□ 0.2
SNAPC3-206ENST00000490969 BATFQ16520 125 aa16.31■□□□□ 0.2
SNAPC3-206ENST00000490969 ATP6V1FQ16864 119 aa16.31■□□□□ 0.2
SNAPC3-206ENST00000490969 TMEM183BQ1AE95 376 aa16.31■□□□□ 0.2
SNAPC3-206ENST00000490969 LOXL4Q96JB6 756 aa16.31■□□□□ 0.2
SNAPC3-206ENST00000490969 OR51B6Q9H340 312 aa16.31■□□□□ 0.2
SNAPC3-206ENST00000490969 PAM16Q9Y3D7 125 aa16.31■□□□□ 0.2
SNAPC3-206ENST00000490969 RIF1Q5UIP0 2472 aaKnown RBP16.31■□□□□ 0.2
SNAPC3-206ENST00000490969 TRAV24A0A0B4J272 114 aa16.3■□□□□ 0.2
SNAPC3-206ENST00000490969 ZNF716A6NP11 495 aa16.3■□□□□ 0.2
SNAPC3-206ENST00000490969 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.3■□□□□ 0.2
SNAPC3-206ENST00000490969 CRYAAP02489 173 aa16.3■□□□□ 0.2
SNAPC3-206ENST00000490969 RANP62826 216 aaKnown RBP16.3■□□□□ 0.2
SNAPC3-206ENST00000490969 PAFAH1B2P68402 229 aa16.3■□□□□ 0.2
SNAPC3-206ENST00000490969 DMRTA1Q5VZB9 504 aa16.3■□□□□ 0.2
SNAPC3-206ENST00000490969 COLCA1Q6ZS62 124 aa16.3■□□□□ 0.2
SNAPC3-206ENST00000490969 TP53TG3Q9ULZ0 132 aa16.3■□□□□ 0.2
SNAPC3-206ENST00000490969 RBM7Q9Y580 266 aaKnown RBP16.3■□□□□ 0.2
SNAPC3-206ENST00000490969 YPEL3P61236 119 aaPredicted RBP16.3■□□□□ 0.2
SNAPC3-206ENST00000490969 FGFRL1Q8N441 504 aa16.3■□□□□ 0.2
SNAPC3-206ENST00000490969 ZNF488Q96MN9 340 aa16.3■□□□□ 0.2
SNAPC3-206ENST00000490969 ZDHHC11Q9H8X9 412 aa16.3■□□□□ 0.2
SNAPC3-206ENST00000490969 GJE1A6NN92 205 aa16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 NPIPB11E5RHQ5 1161 aa16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 PDE6DO43924 150 aa16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 NUFIP2Q7Z417 695 aaKnown RBP16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 DERL1Q9BUN8 251 aa16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 NPCDR1Q9BY65 106 aa16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 ZNHIT1O43257 154 aa16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 DNPH1O43598 174 aa16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 WDR1O75083 606 aa16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 LINC00310P59036 64 aa16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 SELENOTP62341 195 aa16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 OR5I1Q13606 314 aa16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 TIPARPQ7Z3E1 657 aaKnown RBP16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 PRR18Q8N4B5 295 aa16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 ZNF114Q8NC26 417 aa16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 SGCZQ96LD1 299 aa16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 VAMP8Q9BV40 100 aa16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 PATZ1Q9HBE1 687 aaKnown RBP16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 RYDENQ9NUL5 291 aaKnown RBP16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 LOXL2Q9Y4K0 774 aa16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 LOC400499M0QZD8 3231 aa16.29■□□□□ 0.2
SNAPC3-206ENST00000490969 PGPEP1LA6NFU8 196 aa16.28■□□□□ 0.2
SNAPC3-206ENST00000490969 NDUFB4O95168 129 aa16.28■□□□□ 0.2
SNAPC3-206ENST00000490969 CDKN1AP38936 164 aa16.28■□□□□ 0.2
SNAPC3-206ENST00000490969 LINC00596Q86U02 117 aa16.28■□□□□ 0.2
SNAPC3-206ENST00000490969 OR5P3Q8WZ94 311 aa16.28■□□□□ 0.2
SNAPC3-206ENST00000490969 SFRP2Q96HF1 295 aa16.28■□□□□ 0.2
SNAPC3-206ENST00000490969 HSPB9Q9BQS6 159 aa16.28■□□□□ 0.2
SNAPC3-206ENST00000490969 HSPB7Q9UBY9 170 aa16.28■□□□□ 0.2
SNAPC3-206ENST00000490969 TRAV39A0A0B4J263 110 aa16.28■□□□□ 0.2
SNAPC3-206ENST00000490969 BMP5P22003 454 aa16.28■□□□□ 0.2
SNAPC3-206ENST00000490969 CCNOP22674 350 aa16.28■□□□□ 0.2
SNAPC3-206ENST00000490969 ATP5G3P48201 142 aa16.28■□□□□ 0.2
SNAPC3-206ENST00000490969 CDC34P49427 236 aaPredicted RBP16.28■□□□□ 0.2
SNAPC3-206ENST00000490969 CARD18P57730 90 aa16.28■□□□□ 0.2
SNAPC3-206ENST00000490969 PCOLCEQ15113 449 aa16.28■□□□□ 0.2
SNAPC3-206ENST00000490969 RIPPLY2Q5TAB7 128 aa16.28■□□□□ 0.2
SNAPC3-206ENST00000490969 ZNF709Q8N972 641 aa16.28■□□□□ 0.2
SNAPC3-206ENST00000490969 OR1L1Q8NH94 360 aa16.28■□□□□ 0.2
SNAPC3-206ENST00000490969 PMS2P5A8MQ11 134 aa16.27■□□□□ 0.2
SNAPC3-206ENST00000490969 C3orf80F5H4A9 247 aa16.27■□□□□ 0.2
SNAPC3-206ENST00000490969 RBFOX2O43251 390 aaKnown RBP eCLIP16.27■□□□□ 0.2
SNAPC3-206ENST00000490969 MRPL21Q7Z2W9 205 aaKnown RBP16.27■□□□□ 0.2
SNAPC3-206ENST00000490969 VN1R17PQ8TDU5 208 aa16.27■□□□□ 0.2
SNAPC3-206ENST00000490969 DLL3Q9NYJ7 618 aa16.27■□□□□ 0.2
SNAPC3-206ENST00000490969 CLN8Q9UBY8 286 aa16.27■□□□□ 0.2
SNAPC3-206ENST00000490969 DIDO1Q9BTC0 2240 aaKnown RBP16.27■□□□□ 0.2
SNAPC3-206ENST00000490969 ESDP10768 282 aa16.27■□□□□ 0.2
SNAPC3-206ENST00000490969 CD82P27701 267 aa16.27■□□□□ 0.2
SNAPC3-206ENST00000490969 UBE2G2P60604 165 aa16.27■□□□□ 0.2
SNAPC3-206ENST00000490969 OR10P1Q8NGE3 313 aa16.27■□□□□ 0.2
SNAPC3-206ENST00000490969 OR5A2Q8NGI9 324 aa16.27■□□□□ 0.2
SNAPC3-206ENST00000490969 MDFIC2A0A1B0GVS7 189 aa16.26■□□□□ 0.19
SNAPC3-206ENST00000490969 SERF1AO75920 110 aa16.26■□□□□ 0.19
SNAPC3-206ENST00000490969 PCSK5Q92824 1860 aa16.26■□□□□ 0.19
SNAPC3-206ENST00000490969 ZFHX2Q9C0A1 2572 aaPredicted RBP16.26■□□□□ 0.19
SNAPC3-206ENST00000490969 CXCL13O43927 109 aa16.26■□□□□ 0.19
SNAPC3-206ENST00000490969 CBR3O75828 277 aa16.26■□□□□ 0.19
SNAPC3-206ENST00000490969 SPINK2P20155 84 aa16.26■□□□□ 0.19
SNAPC3-206ENST00000490969 LHX2P50458 406 aa16.26■□□□□ 0.19
SNAPC3-206ENST00000490969 MLF1P58340 268 aa16.26■□□□□ 0.19
SNAPC3-206ENST00000490969 RPS16P62249 146 aaKnown RBP16.26■□□□□ 0.19
SNAPC3-206ENST00000490969 COL5A1-AS1Q5SY13 56 aa16.26■□□□□ 0.19
SNAPC3-206ENST00000490969 DHRS13Q6UX07 377 aa16.26■□□□□ 0.19
SNAPC3-206ENST00000490969 DRAM1Q8N682 238 aa16.26■□□□□ 0.19
SNAPC3-206ENST00000490969 ZNF552Q9H707 407 aaPredicted RBP16.26■□□□□ 0.19
SNAPC3-206ENST00000490969 F6UZH7 168 aa16.25■□□□□ 0.19
SNAPC3-206ENST00000490969 SERPINA7P05543 415 aa16.25■□□□□ 0.19
SNAPC3-206ENST00000490969 CCL2P13500 99 aa16.25■□□□□ 0.19
SNAPC3-206ENST00000490969 TFPI2P48307 235 aa16.25■□□□□ 0.19
SNAPC3-206ENST00000490969 B3GALT5-AS1P59052 145 aa16.25■□□□□ 0.19
SNAPC3-206ENST00000490969 MSMO1Q15800 293 aa16.25■□□□□ 0.19
SNAPC3-206ENST00000490969 UBALD1Q8TB05 177 aa16.25■□□□□ 0.19
SNAPC3-206ENST00000490969 KCNIP2Q9NS61 270 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms