RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	SRD5A3	Q9H8P0	318 aa		11.53	□□□□□ -0.56
AGAP3-222	ENST00000490839	COA4	Q9NYJ1	87 aa		11.53	□□□□□ -0.56
AGAP3-222	ENST00000490839	ZNF221	Q9UK13	617 aa		11.53	□□□□□ -0.56
AGAP3-222	ENST00000490839	DYNC1I1	O14576	645 aa		11.52	□□□□□ -0.57
AGAP3-222	ENST00000490839	IGLV2-23	P01705	113 aa		11.52	□□□□□ -0.57
AGAP3-222	ENST00000490839	CD7	P09564	240 aa		11.52	□□□□□ -0.57
AGAP3-222	ENST00000490839	MAPK3	P27361	379 aa	Predicted RBP	11.52	□□□□□ -0.57
AGAP3-222	ENST00000490839	HLA-DRB3	P79483	266 aa		11.52	□□□□□ -0.57
AGAP3-222	ENST00000490839	PJVK	Q0ZLH3	352 aa		11.52	□□□□□ -0.57
AGAP3-222	ENST00000490839	OR10K2	Q6IF99	312 aa		11.52	□□□□□ -0.57
AGAP3-222	ENST00000490839	DEFB125	Q8N687	156 aa		11.52	□□□□□ -0.57
AGAP3-222	ENST00000490839	TMEM80	Q96HE8	168 aa		11.52	□□□□□ -0.57
AGAP3-222	ENST00000490839	TM2D1	Q9BX74	207 aa		11.52	□□□□□ -0.57
AGAP3-222	ENST00000490839	SLC35D1	Q9NTN3	355 aa		11.52	□□□□□ -0.57
AGAP3-222	ENST00000490839	MGAT4A	Q9UM21	535 aa		11.52	□□□□□ -0.57
AGAP3-222	ENST00000490839	PNMA8C	A0A1B0GUJ8	204 aa		11.51	□□□□□ -0.57
AGAP3-222	ENST00000490839	OR11H12	B2RN74	326 aa		11.51	□□□□□ -0.57
AGAP3-222	ENST00000490839	LY6G6C	O95867	125 aa		11.51	□□□□□ -0.57
AGAP3-222	ENST00000490839	CRYGB	P07316	175 aa		11.51	□□□□□ -0.57
AGAP3-222	ENST00000490839	HTR2C	P28335	458 aa		11.51	□□□□□ -0.57
AGAP3-222	ENST00000490839	LINC00205	P59089	165 aa		11.51	□□□□□ -0.57
AGAP3-222	ENST00000490839	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.51	□□□□□ -0.57
AGAP3-222	ENST00000490839	KCNG3	Q8TAE7	436 aa		11.51	□□□□□ -0.57
AGAP3-222	ENST00000490839	DYNLRB2	Q8TF09	96 aa		11.51	□□□□□ -0.57
AGAP3-222	ENST00000490839	NICN1	Q9BSH3	213 aa		11.51	□□□□□ -0.57
AGAP3-222	ENST00000490839	WFDC10A	Q9H1F0	79 aa		11.51	□□□□□ -0.57
AGAP3-222	ENST00000490839	ZNF785	A8K8V0	405 aa		11.5	□□□□□ -0.57
AGAP3-222	ENST00000490839		M0R1X1	148 aa		11.5	□□□□□ -0.57
AGAP3-222	ENST00000490839	BMPR1B	O00238	502 aa		11.5	□□□□□ -0.57
AGAP3-222	ENST00000490839	CD1A	P06126	327 aa		11.5	□□□□□ -0.57
AGAP3-222	ENST00000490839	ADAD2	Q8NCV1	583 aa	Known RBP	11.5	□□□□□ -0.57
AGAP3-222	ENST00000490839	ZNF555	Q8NEP9	628 aa		11.5	□□□□□ -0.57
AGAP3-222	ENST00000490839	HARBI1	Q96MB7	349 aa		11.5	□□□□□ -0.57
AGAP3-222	ENST00000490839	PHB2	Q99623	299 aa		11.5	□□□□□ -0.57
AGAP3-222	ENST00000490839	ZC4H2	Q9NQZ6	224 aa		11.5	□□□□□ -0.57
AGAP3-222	ENST00000490839	PLEKHJ1	Q9NW61	149 aa		11.5	□□□□□ -0.57
AGAP3-222	ENST00000490839	FAM223B	A6NKX1	122 aa		11.49	□□□□□ -0.57
AGAP3-222	ENST00000490839	RBMXL2	O75526	392 aa	Known RBP	11.49	□□□□□ -0.57
AGAP3-222	ENST00000490839	OR9G9	P0C7N8	305 aa		11.49	□□□□□ -0.57
AGAP3-222	ENST00000490839	UNC119	Q13432	240 aa		11.49	□□□□□ -0.57
AGAP3-222	ENST00000490839	EXOSC2	Q13868	293 aa	Known RBP	11.49	□□□□□ -0.57
AGAP3-222	ENST00000490839	DEFB114	Q30KQ6	69 aa		11.49	□□□□□ -0.57
AGAP3-222	ENST00000490839	C1orf100	Q5SVJ3	147 aa		11.49	□□□□□ -0.57
AGAP3-222	ENST00000490839	TTC23	Q5W5X9	447 aa		11.49	□□□□□ -0.57
AGAP3-222	ENST00000490839	GLT8D1	Q68CQ7	371 aa		11.49	□□□□□ -0.57
AGAP3-222	ENST00000490839	FAM223A	Q8IWN6	122 aa		11.49	□□□□□ -0.57
AGAP3-222	ENST00000490839	HDHD3	Q9BSH5	251 aa	Predicted RBP	11.49	□□□□□ -0.57
AGAP3-222	ENST00000490839	C12orf4	Q9NQ89	552 aa		11.49	□□□□□ -0.57
AGAP3-222	ENST00000490839	FAM53C	Q9NYF3	392 aa		11.49	□□□□□ -0.57
AGAP3-222	ENST00000490839	AK3	Q9UIJ7	227 aa		11.49	□□□□□ -0.57
AGAP3-222	ENST00000490839	CXorf65	A6NEN9	183 aa		11.48	□□□□□ -0.57
AGAP3-222	ENST00000490839	SCT	P09683	121 aa		11.48	□□□□□ -0.57
AGAP3-222	ENST00000490839	CEL	P19835	753 aa		11.48	□□□□□ -0.57
AGAP3-222	ENST00000490839	RHOG	P84095	191 aa		11.48	□□□□□ -0.57
AGAP3-222	ENST00000490839	CBX3	Q13185	183 aa		11.48	□□□□□ -0.57
AGAP3-222	ENST00000490839	GUCA2B	Q16661	112 aa		11.48	□□□□□ -0.57
AGAP3-222	ENST00000490839	DDB2	Q92466	427 aa		11.48	□□□□□ -0.57
AGAP3-222	ENST00000490839	GGH	Q92820	318 aa		11.48	□□□□□ -0.57
AGAP3-222	ENST00000490839	ST6GALNAC5	Q9BVH7	336 aa		11.48	□□□□□ -0.57
AGAP3-222	ENST00000490839	KCNK15	Q9H427	330 aa		11.48	□□□□□ -0.57
AGAP3-222	ENST00000490839		Q9N2K0	584 aa		11.48	□□□□□ -0.57
AGAP3-222	ENST00000490839	TECR	Q9NZ01	308 aa	Known RBP	11.48	□□□□□ -0.57
AGAP3-222	ENST00000490839	ZNF230	Q9UIE0	474 aa	Predicted RBP	11.48	□□□□□ -0.57
AGAP3-222	ENST00000490839	KMT2A	Q03164	3969 aa		11.47	□□□□□ -0.57
AGAP3-222	ENST00000490839		A0A0A6YYD4	124 aa		11.47	□□□□□ -0.57
AGAP3-222	ENST00000490839	NUPR2	A6NF83	97 aa		11.47	□□□□□ -0.57
AGAP3-222	ENST00000490839	EFCAB10	A6NFE3	127 aa		11.47	□□□□□ -0.57
AGAP3-222	ENST00000490839	MSGN1	A6NI15	193 aa		11.47	□□□□□ -0.57
AGAP3-222	ENST00000490839	TMEM14DP	A8MWL7	114 aa		11.47	□□□□□ -0.57
AGAP3-222	ENST00000490839	TUSC2	O75896	110 aa		11.47	□□□□□ -0.57
AGAP3-222	ENST00000490839	APELA	P0DMC3	54 aa		11.47	□□□□□ -0.57
AGAP3-222	ENST00000490839	QRFP	P83859	136 aa		11.47	□□□□□ -0.57
AGAP3-222	ENST00000490839	TAGLN	Q01995	201 aa	Known RBP	11.47	□□□□□ -0.57
AGAP3-222	ENST00000490839	ATP5G2	Q06055	141 aa		11.47	□□□□□ -0.57
AGAP3-222	ENST00000490839	TMEM177	Q53S58	311 aa		11.47	□□□□□ -0.57
AGAP3-222	ENST00000490839	FAM209B	Q5JX69	171 aa		11.47	□□□□□ -0.57
AGAP3-222	ENST00000490839	SLC16A13	Q7RTY0	426 aa		11.47	□□□□□ -0.57
AGAP3-222	ENST00000490839	LRRTM1	Q86UE6	522 aa		11.47	□□□□□ -0.57
AGAP3-222	ENST00000490839	PHYHIP	Q92561	330 aa		11.47	□□□□□ -0.57
AGAP3-222	ENST00000490839	KCTD12	Q96CX2	325 aa	Known RBP	11.47	□□□□□ -0.57
AGAP3-222	ENST00000490839	AKIP1	Q9NQ31	210 aa		11.47	□□□□□ -0.57
AGAP3-222	ENST00000490839	SMPD3	Q9NY59	655 aa	Predicted RBP	11.47	□□□□□ -0.57
AGAP3-222	ENST00000490839	RDH8	Q9NYR8	311 aa		11.47	□□□□□ -0.57
AGAP3-222	ENST00000490839	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.46	□□□□□ -0.57
AGAP3-222	ENST00000490839	TRBV9	A0A0B4J1U6	114 aa		11.46	□□□□□ -0.57
AGAP3-222	ENST00000490839	IGKV1-6	A0A0C4DH72	117 aa		11.46	□□□□□ -0.57
AGAP3-222	ENST00000490839	C2orf70	A6NJV1	201 aa		11.46	□□□□□ -0.57
AGAP3-222	ENST00000490839	SHOX	O15266	292 aa		11.46	□□□□□ -0.57
AGAP3-222	ENST00000490839	MPPED1	O15442	326 aa		11.46	□□□□□ -0.57
AGAP3-222	ENST00000490839	BPNT1	O95861	308 aa		11.46	□□□□□ -0.57
AGAP3-222	ENST00000490839	FOLR2	P14207	255 aa		11.46	□□□□□ -0.57
AGAP3-222	ENST00000490839	SRM	P19623	302 aa		11.46	□□□□□ -0.57
AGAP3-222	ENST00000490839	KIR2DS2	P43631	304 aa		11.46	□□□□□ -0.57
AGAP3-222	ENST00000490839	ST3GAL4	Q11206	333 aa		11.46	□□□□□ -0.57
AGAP3-222	ENST00000490839	PMS2P11	Q13670	270 aa		11.46	□□□□□ -0.57
AGAP3-222	ENST00000490839	PRSS8	Q16651	343 aa		11.46	□□□□□ -0.57
AGAP3-222	ENST00000490839	RTL8B	Q17RB0	113 aa		11.46	□□□□□ -0.57
AGAP3-222	ENST00000490839	MRGPRG-AS1	Q2M3A8	158 aa		11.46	□□□□□ -0.57
AGAP3-222	ENST00000490839	RBM48	Q5RL73	367 aa	Known RBP	11.46	□□□□□ -0.57
AGAP3-222	ENST00000490839	C10orf67	Q8IYJ2	551 aa		11.46	□□□□□ -0.57

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