RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 ARL14EPLP0DKL9 152 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 CD46P15529 392 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 CCL1P22362 96 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 USF1P22415 310 aaPredicted RBP10.95□□□□□ -0.66
SHOX2-205ENST00000490689 OTX1P32242 354 aaPredicted RBP10.95□□□□□ -0.66
SHOX2-205ENST00000490689 BRS3P32247 399 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 MNX1P50219 401 aaPredicted RBP10.95□□□□□ -0.66
SHOX2-205ENST00000490689 LRRC75BQ2VPJ9 315 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 SLC23A3Q6PIS1 610 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 WDR74Q6RFH5 385 aaPredicted RBP10.95□□□□□ -0.66
SHOX2-205ENST00000490689 DRAM1Q8N682 238 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 NHLRC2Q8NBF2 726 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 TMEM56Q96MV1 263 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 SIT1Q9Y3P8 196 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 TMEM56-RWDD3S4R434 201 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 J3QT63 122 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 TCTAP57738 103 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 ARSJQ5FYB0 599 aaPredicted RBP10.94□□□□□ -0.66
SHOX2-205ENST00000490689 VKORC1L1Q8N0U8 176 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 LYG1Q8N1E2 194 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 PCNX1Q96RV3 2341 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 TRBV24-1A0A075B6N3 115 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 RHBDL1O75783 438 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 OR2H2O95918 312 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 IL3RAP26951 378 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 NUTF2P61970 127 aaKnown RBP10.94□□□□□ -0.66
SHOX2-205ENST00000490689 PLGLAQ15195 96 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 C10orf128Q5T292 105 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 SLC35E1Q96K37 410 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 OR2J1Q9GZK6 312 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 PXMP4Q9Y6I8 212 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 USF3Q68DE3 2245 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 CEACAM18A8MTB9 384 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 HAND1O96004 215 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 CHRNB4P30926 498 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 RAB7AP51149 207 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 HIST3H3Q16695 136 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 PSMG3Q9BT73 122 aaPredicted RBP10.94□□□□□ -0.66
SHOX2-205ENST00000490689 DNAJC4Q9NNZ3 241 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 CLEC1BQ9P126 229 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 ZNF835Q9Y2P0 537 aa10.94□□□□□ -0.66
SHOX2-205ENST00000490689 hCG_38984A0A1B0GV85 526 aa10.93□□□□□ -0.66
SHOX2-205ENST00000490689 SYNGR3O43761 229 aa10.93□□□□□ -0.66
SHOX2-205ENST00000490689 TMEM50AO95807 157 aa10.93□□□□□ -0.66
SHOX2-205ENST00000490689 LINC00271P0C7V0 271 aa10.93□□□□□ -0.66
SHOX2-205ENST00000490689 PAFAH1B2P68402 229 aa10.93□□□□□ -0.66
SHOX2-205ENST00000490689 CADM4Q8NFZ8 388 aa10.93□□□□□ -0.66
SHOX2-205ENST00000490689 FAM216AQ8WUB2 273 aa10.93□□□□□ -0.66
SHOX2-205ENST00000490689 GCSAMLQ5JQS6 135 aa10.93□□□□□ -0.66
SHOX2-205ENST00000490689 DMRTC2Q8IXT2 367 aaPredicted RBP10.93□□□□□ -0.66
SHOX2-205ENST00000490689 LRTM2Q8N967 370 aa10.93□□□□□ -0.66
SHOX2-205ENST00000490689 FGFBP3Q8TAT2 258 aa10.93□□□□□ -0.66
SHOX2-205ENST00000490689 BLNKQ8WV28 456 aa10.93□□□□□ -0.66
SHOX2-205ENST00000490689 SFRP2Q96HF1 295 aa10.93□□□□□ -0.66
SHOX2-205ENST00000490689 COMMD5Q9GZQ3 224 aa10.93□□□□□ -0.66
SHOX2-205ENST00000490689 PRDM13Q9H4Q3 707 aa10.93□□□□□ -0.66
SHOX2-205ENST00000490689 SH2D2AQ9NP31 389 aa10.93□□□□□ -0.66
SHOX2-205ENST00000490689 PNRC2Q9NPJ4 139 aaKnown RBP10.93□□□□□ -0.66
SHOX2-205ENST00000490689 SSUH2Q9Y2M2 353 aa10.93□□□□□ -0.66
SHOX2-205ENST00000490689 MFAP2P55001 183 aa10.93□□□□□ -0.66
SHOX2-205ENST00000490689 Q8IYB0 196 aa10.93□□□□□ -0.66
SHOX2-205ENST00000490689 TOX3O15405 576 aaPredicted RBP10.92□□□□□ -0.66
SHOX2-205ENST00000490689 SMIM21Q3B7S5 101 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 FAM90A2PQ658T7 463 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 CARFQ8N187 725 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 ABHD12Q8N2K0 398 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 OR2Z1Q8NG97 314 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 OR2D3Q8NGH3 330 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 TMEM170AQ8WVE7 144 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 ZCCHC14Q8WYQ9 949 aaKnown RBP10.92□□□□□ -0.66
SHOX2-205ENST00000490689 QTRT1Q9BXR0 403 aaKnown RBP10.92□□□□□ -0.66
SHOX2-205ENST00000490689 OPN3Q9H1Y3 402 aaPredicted RBP10.92□□□□□ -0.66
SHOX2-205ENST00000490689 WASHC3Q9Y3C0 194 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 PCNX3Q9H6A9 2034 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 SERF1AO75920 110 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 MAGEA5P43359 124 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 C6orf15Q6UXA7 325 aaPredicted RBP10.92□□□□□ -0.66
SHOX2-205ENST00000490689 RPP25LQ8N5L8 163 aaKnown RBP10.92□□□□□ -0.66
SHOX2-205ENST00000490689 H1FXQ92522 213 aaKnown RBP10.92□□□□□ -0.66
SHOX2-205ENST00000490689 CORO2AQ92828 525 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 WIPI2Q9Y4P8 454 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 MED13LQ71F56 2210 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 CHD3Q12873 2000 aaKnown RBP10.92□□□□□ -0.66
SHOX2-205ENST00000490689 A0A0G2JRQ6 117 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 COX7A2P2O60397 106 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 CXorf1O96002 111 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 RFPL3SP0C7P2 107 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 SRIP30626 198 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 IL15RAQ13261 267 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 KCNMB1Q16558 191 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 DOLPP1Q86YN1 238 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 FAM19A2Q8N3H0 131 aa10.92□□□□□ -0.66
SHOX2-205ENST00000490689 RBM14Q96PK6 669 aaKnown RBP10.92□□□□□ -0.66
SHOX2-205ENST00000490689 CHCHD2Q9Y6H1 151 aaPredicted RBP10.92□□□□□ -0.66
SHOX2-205ENST00000490689 INTS1Q8N201 2190 aaKnown RBP10.92□□□□□ -0.66
SHOX2-205ENST00000490689 KLRC4-KLRK1H3BQV0 150 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 IGHEP01854 428 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 HBZP02008 142 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 ANOS1P23352 680 aa10.91□□□□□ -0.66
SHOX2-205ENST00000490689 PQLC2Q6ZP29 291 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms