RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 GABARAPH6UMI1 98 aa11.41□□□□□ -0.58
SRGAP3-208ENST00000490348 M0QZK8 103 aa11.41□□□□□ -0.58
SRGAP3-208ENST00000490348 DUTP33316 252 aaKnown RBP11.41□□□□□ -0.58
SRGAP3-208ENST00000490348 C3orf56Q8N813 242 aa11.41□□□□□ -0.58
SRGAP3-208ENST00000490348 OR2T6Q8NHC8 308 aa11.41□□□□□ -0.58
SRGAP3-208ENST00000490348 C15orf40Q8WUR7 153 aa11.41□□□□□ -0.58
SRGAP3-208ENST00000490348 SMIM4Q8WVI0 70 aa11.41□□□□□ -0.58
SRGAP3-208ENST00000490348 FCAMRQ8WWV6 532 aa11.41□□□□□ -0.58
SRGAP3-208ENST00000490348 DDB2Q92466 427 aa11.41□□□□□ -0.58
SRGAP3-208ENST00000490348 GPHA2Q96T91 129 aa11.41□□□□□ -0.58
SRGAP3-208ENST00000490348 ZNF747Q9BV97 191 aa11.41□□□□□ -0.58
SRGAP3-208ENST00000490348 RBMX2Q9Y388 322 aaKnown RBP11.41□□□□□ -0.58
SRGAP3-208ENST00000490348 WASHC3Q9Y3C0 194 aa11.41□□□□□ -0.58
SRGAP3-208ENST00000490348 V9GYH0 126 aa11.41□□□□□ -0.58
SRGAP3-208ENST00000490348 M0QYG6 137 aa11.4□□□□□ -0.58
SRGAP3-208ENST00000490348 HAX1O00165 279 aa11.4□□□□□ -0.58
SRGAP3-208ENST00000490348 CTDSPLO15194 276 aa11.4□□□□□ -0.58
SRGAP3-208ENST00000490348 MC5RP33032 325 aa11.4□□□□□ -0.58
SRGAP3-208ENST00000490348 RPL30P62888 115 aaKnown RBP11.4□□□□□ -0.58
SRGAP3-208ENST00000490348 WIPF2Q8TF74 440 aaPredicted RBP11.4□□□□□ -0.58
SRGAP3-208ENST00000490348 ZNF2Q9BSG1 426 aaPredicted RBP11.4□□□□□ -0.58
SRGAP3-208ENST00000490348 CCL28Q9NRJ3 127 aa11.4□□□□□ -0.58
SRGAP3-208ENST00000490348 FABP12A6NFH5 140 aa11.39□□□□□ -0.59
SRGAP3-208ENST00000490348 LINC01548A6NM66 108 aa11.39□□□□□ -0.59
SRGAP3-208ENST00000490348 H7C2Y5 167 aa11.39□□□□□ -0.59
SRGAP3-208ENST00000490348 RBBP9O75884 186 aa11.39□□□□□ -0.59
SRGAP3-208ENST00000490348 CD3DP04234 171 aa11.39□□□□□ -0.59
SRGAP3-208ENST00000490348 FXYD4P59646 89 aa11.39□□□□□ -0.59
SRGAP3-208ENST00000490348 MMDQ15546 238 aa11.39□□□□□ -0.59
SRGAP3-208ENST00000490348 VAX1Q5SQQ9 334 aa11.39□□□□□ -0.59
SRGAP3-208ENST00000490348 HIST2H2BDQ6DRA6 164 aa11.39□□□□□ -0.59
SRGAP3-208ENST00000490348 CCDC190Q86UF4 302 aa11.39□□□□□ -0.59
SRGAP3-208ENST00000490348 NPBQ8NG41 125 aa11.39□□□□□ -0.59
SRGAP3-208ENST00000490348 OR8H1Q8NGG4 311 aa11.39□□□□□ -0.59
SRGAP3-208ENST00000490348 OR4D10Q8NGI6 311 aa11.39□□□□□ -0.59
SRGAP3-208ENST00000490348 SECTM1Q8WVN6 248 aa11.39□□□□□ -0.59
SRGAP3-208ENST00000490348 MOB3AQ96BX8 217 aa11.39□□□□□ -0.59
SRGAP3-208ENST00000490348 TINAGL1Q9GZM7 467 aaPredicted RBP11.39□□□□□ -0.59
SRGAP3-208ENST00000490348 WNT10AQ9GZT5 417 aa11.39□□□□□ -0.59
SRGAP3-208ENST00000490348 PLXNB1O43157 2135 aa11.39□□□□□ -0.59
SRGAP3-208ENST00000490348 NDUFA3O95167 84 aa11.38□□□□□ -0.59
SRGAP3-208ENST00000490348 GNRHRP30968 328 aa11.38□□□□□ -0.59
SRGAP3-208ENST00000490348 BRWD1-AS2P59051 145 aa11.38□□□□□ -0.59
SRGAP3-208ENST00000490348 MRPS10P82664 201 aaKnown RBP11.38□□□□□ -0.59
SRGAP3-208ENST00000490348 ZNF79Q15937 498 aa11.38□□□□□ -0.59
SRGAP3-208ENST00000490348 ZNF818PQ6ZRF7 136 aa11.38□□□□□ -0.59
SRGAP3-208ENST00000490348 TMEM17Q86X19 198 aa11.38□□□□□ -0.59
SRGAP3-208ENST00000490348 PDPNQ86YL7 162 aa11.38□□□□□ -0.59
SRGAP3-208ENST00000490348 KLHDC1Q8N7A1 406 aa11.38□□□□□ -0.59
SRGAP3-208ENST00000490348 TSC22D3Q99576 134 aa11.38□□□□□ -0.59
SRGAP3-208ENST00000490348 CITED1Q99966 193 aa11.38□□□□□ -0.59
SRGAP3-208ENST00000490348 HSPB9Q9BQS6 159 aa11.38□□□□□ -0.59
SRGAP3-208ENST00000490348 FXYD6Q9H0Q3 95 aa11.38□□□□□ -0.59
SRGAP3-208ENST00000490348 SLC35D1Q9NTN3 355 aa11.38□□□□□ -0.59
SRGAP3-208ENST00000490348 LIN7CQ9NUP9 197 aaKnown RBP11.38□□□□□ -0.59
SRGAP3-208ENST00000490348 ZNF107Q9UII5 783 aaPredicted RBP11.38□□□□□ -0.59
SRGAP3-208ENST00000490348 NBR2O15453 112 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 TNFSF12O43508 249 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 GSTZ1O43708 216 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 PEX14O75381 377 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 SLC22A5O76082 557 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 CD74P04233 296 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 VDAC2P45880 294 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 THBS3P49746 956 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 C9orf152Q5JTZ5 239 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 AADACL3Q5VUY0 350 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 BVESQ8NE79 360 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 OR6Q1Q8NGQ2 317 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 SLC5A7Q9GZV3 580 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 TAS2R8Q9NYW2 309 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 RABL2AQ9UBK7 228 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 RABL2BQ9UNT1 228 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 MGAM2Q2M2H8 2515 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 SRRM4A7MD48 611 aaKnown RBP11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 IGLV2-23P01705 113 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 IGHG2P01859 326 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 APOA2P02652 100 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 VSIG10L2P0DP72 767 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 S100A5P33763 92 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 MSMO1Q15800 293 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 C5orf64Q2M2E5 130 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 TMEM229BQ8NBD8 167 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 OR6F1Q8NGZ6 308 aa11.37□□□□□ -0.59
SRGAP3-208ENST00000490348 WNK1Q9H4A3 2382 aa11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 NBEAL1Q6ZS30 2694 aa11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 RRHO14718 337 aa11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 ETV6P41212 452 aa11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 HERV-K104P61576 105 aa11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 SSBP1Q04837 148 aaKnown RBP11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 PSG5Q15238 335 aa11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 ACTBL2Q562R1 376 aa11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 OR2B11Q5JQS5 317 aa11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 FAAP20Q6NZ36 180 aa11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 C10orf99Q6UWK7 81 aa11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 KCTD9Q7L273 389 aa11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 MFSD4AQ8N468 514 aa11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 FLYWCH2Q96CP2 140 aaKnown RBP11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 ADTRPQ96IZ2 230 aa11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 NOL4LQ96MY1 436 aaPredicted RBP11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 HSD17B10Q99714 261 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms