RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 ETV1P50549 477 aa6.17□□□□□ -1.42
USP39-216ENST00000490193 ZIK1Q3SY52 487 aaPredicted RBP6.17□□□□□ -1.42
USP39-216ENST00000490193 CD300EQ496F6 205 aaPredicted RBP6.17□□□□□ -1.42
USP39-216ENST00000490193 YIF1BQ5BJH7 314 aa6.17□□□□□ -1.42
USP39-216ENST00000490193 C1orf146Q5VVC0 180 aa6.17□□□□□ -1.42
USP39-216ENST00000490193 PDPNQ86YL7 162 aa6.17□□□□□ -1.42
USP39-216ENST00000490193 DEFB125Q8N687 156 aa6.17□□□□□ -1.42
USP39-216ENST00000490193 BVESQ8NE79 360 aa6.17□□□□□ -1.42
USP39-216ENST00000490193 OR5T1Q8NG75 326 aa6.17□□□□□ -1.42
USP39-216ENST00000490193 IL1F10Q8WWZ1 152 aa6.17□□□□□ -1.42
USP39-216ENST00000490193 SNAPC3Q92966 411 aa6.17□□□□□ -1.42
USP39-216ENST00000490193 ABHD14BQ96IU4 210 aa6.17□□□□□ -1.42
USP39-216ENST00000490193 PGLYRP3Q96LB9 341 aa6.17□□□□□ -1.42
USP39-216ENST00000490193 UQCC2Q9BRT2 126 aa6.17□□□□□ -1.42
USP39-216ENST00000490193 ST6GALNAC5Q9BVH7 336 aa6.17□□□□□ -1.42
USP39-216ENST00000490193 PARP12Q9H0J9 701 aaKnown RBP6.17□□□□□ -1.42
USP39-216ENST00000490193 SRD5A3Q9H8P0 318 aa6.17□□□□□ -1.42
USP39-216ENST00000490193 BABAM2Q9NXR7 383 aa6.17□□□□□ -1.42
USP39-216ENST00000490193 GHRLQ9UBU3 117 aa6.17□□□□□ -1.42
USP39-216ENST00000490193 TRBV6-6A0A0A6YYG2 114 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 ERICH4A6NGS2 130 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 OR11H12B2RN74 326 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 H3BNX3 289 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 BMPR1BO00238 502 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 RBMXL2O75526 392 aaKnown RBP6.16□□□□□ -1.42
USP39-216ENST00000490193 BAG2O95816 211 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 IGLV2-23P01705 113 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 CRYGBP07316 175 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 DCKP27707 260 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 LGALS7P47929 136 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 RPS16P62249 146 aaKnown RBP6.16□□□□□ -1.42
USP39-216ENST00000490193 DEFB114Q30KQ6 69 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 OR2G6Q5TZ20 316 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 TMPRSS11AQ6ZMR5 421 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 MOB1BQ7L9L4 216 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 NKAIN3Q8N8D7 197 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 ZNF383Q8NA42 475 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 APH1BQ8WW43 257 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 FAM46BQ96A09 425 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 PTX4Q96A99 478 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 SLC29A1Q99808 456 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 OVOL2Q9BRP0 275 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 C11orf54Q9H0W9 315 aaPredicted RBP6.16□□□□□ -1.42
USP39-216ENST00000490193 WFDC10AQ9H1F0 79 aa6.16□□□□□ -1.42
USP39-216ENST00000490193 A0A0B4J203 849 aa6.15□□□□□ -1.42
USP39-216ENST00000490193 APOA2P02652 100 aa6.15□□□□□ -1.42
USP39-216ENST00000490193 UBBP0CG47 229 aa6.15□□□□□ -1.42
USP39-216ENST00000490193 ATF4P18848 351 aaPredicted RBP6.15□□□□□ -1.42
USP39-216ENST00000490193 ZBTB25P24278 435 aa6.15□□□□□ -1.42
USP39-216ENST00000490193 RPS27AP62979 156 aaKnown RBP6.15□□□□□ -1.42
USP39-216ENST00000490193 DEFA5Q01523 94 aa6.15□□□□□ -1.42
USP39-216ENST00000490193 TNFRSF9Q07011 255 aa6.15□□□□□ -1.42
USP39-216ENST00000490193 PJVKQ0ZLH3 352 aa6.15□□□□□ -1.42
USP39-216ENST00000490193 CEMP1Q6PRD7 247 aaPredicted RBP6.15□□□□□ -1.42
USP39-216ENST00000490193 C6orf201Q7Z4U5 140 aa6.15□□□□□ -1.42
USP39-216ENST00000490193 WFDC3Q8IUB2 231 aa6.15□□□□□ -1.42
USP39-216ENST00000490193 DRAXINQ8NBI3 349 aaPredicted RBP6.15□□□□□ -1.42
USP39-216ENST00000490193 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.15□□□□□ -1.42
USP39-216ENST00000490193 ZNF485Q8NCK3 441 aa6.15□□□□□ -1.42
USP39-216ENST00000490193 ADAD2Q8NCV1 583 aaKnown RBP6.15□□□□□ -1.42
USP39-216ENST00000490193 NEDD4LQ96PU5 975 aa6.15□□□□□ -1.42
USP39-216ENST00000490193 DERL3Q96Q80 235 aa6.15□□□□□ -1.42
USP39-216ENST00000490193 FAAP24Q9BTP7 215 aa6.15□□□□□ -1.42
USP39-216ENST00000490193 TM2D1Q9BX74 207 aa6.15□□□□□ -1.42
USP39-216ENST00000490193 RIMS4Q9H426 269 aaPredicted RBP6.15□□□□□ -1.42
USP39-216ENST00000490193 TECRQ9NZ01 308 aaKnown RBP6.15□□□□□ -1.42
USP39-216ENST00000490193 TRBV9A0A0B4J1U6 114 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 LOC100130705A0A1B0GUX0 176 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 IRGMA1A4Y4 181 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 CXorf65A6NEN9 183 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 FAM223BA6NKX1 122 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 WBP4O75554 376 aaKnown RBP6.14□□□□□ -1.43
USP39-216ENST00000490193 NDUFB8O95169 186 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 CD1AP06126 327 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 OR9G9P0C7N8 305 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 CEACAM6P40199 344 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 KIR2DS2P43631 304 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 LINC00205P59089 165 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 HLA-DRB3P79483 266 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 MRGPRG-AS1Q2M3A8 158 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 FAM209BQ5JX69 171 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 FAM223AQ8IWN6 122 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 CBR4Q8N4T8 237 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 RPP25LQ8N5L8 163 aaKnown RBP6.14□□□□□ -1.43
USP39-216ENST00000490193 DYNLRB2Q8TF09 96 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 THRSPQ92748 146 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 GGTLC1Q9BX51 225 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 SLC35D1Q9NTN3 355 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 COA4Q9NYJ1 87 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 OR1A1Q9P1Q5 309 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 ZNF230Q9UIE0 474 aaPredicted RBP6.14□□□□□ -1.43
USP39-216ENST00000490193 MGAT4AQ9UM21 535 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 DIMT1Q9UNQ2 313 aaKnown RBP6.14□□□□□ -1.43
USP39-216ENST00000490193 TP53TG1Q9Y2A0 90 aa6.14□□□□□ -1.43
USP39-216ENST00000490193 EXOSC1Q9Y3B2 195 aaKnown RBP6.14□□□□□ -1.43
USP39-216ENST00000490193 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.13□□□□□ -1.43
USP39-216ENST00000490193 A0A1W2PPK0 400 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 C2orf70A6NJV1 201 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 LGALS9O00182 355 aa6.13□□□□□ -1.43
USP39-216ENST00000490193 DYNC1I1O14576 645 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms