RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 GHRLQ9UBU3 117 aa10.52□□□□□ -0.73
VARS-227ENST00000489979 HECTD4Q9Y4D8 3996 aa10.51□□□□□ -0.73
VARS-227ENST00000489979 PNMA8CA0A1B0GUJ8 204 aa10.51□□□□□ -0.73
VARS-227ENST00000489979 CXorf65A6NEN9 183 aa10.51□□□□□ -0.73
VARS-227ENST00000489979 BMPR1BO00238 502 aa10.51□□□□□ -0.73
VARS-227ENST00000489979 IGLV2-23P01705 113 aa10.51□□□□□ -0.73
VARS-227ENST00000489979 CRYGBP07316 175 aa10.51□□□□□ -0.73
VARS-227ENST00000489979 MYL12AP19105 171 aa10.51□□□□□ -0.73
VARS-227ENST00000489979 ZBTB25P24278 435 aa10.51□□□□□ -0.73
VARS-227ENST00000489979 GUCA2BQ16661 112 aa10.51□□□□□ -0.73
VARS-227ENST00000489979 DEFB114Q30KQ6 69 aa10.51□□□□□ -0.73
VARS-227ENST00000489979 NKAIN3Q8N8D7 197 aa10.51□□□□□ -0.73
VARS-227ENST00000489979 DYNLRB2Q8TF09 96 aa10.51□□□□□ -0.73
VARS-227ENST00000489979 SLC35D1Q9NTN3 355 aa10.51□□□□□ -0.73
VARS-227ENST00000489979 ZNF221Q9UK13 617 aa10.51□□□□□ -0.73
VARS-227ENST00000489979 EXOSC1Q9Y3B2 195 aaKnown RBP10.51□□□□□ -0.73
VARS-227ENST00000489979 VPS13DQ5THJ4 4388 aa10.5□□□□□ -0.73
VARS-227ENST00000489979 PCLOQ9Y6V0 5065 aa10.5□□□□□ -0.73
VARS-227ENST00000489979 HTR2CP28335 458 aa10.5□□□□□ -0.73
VARS-227ENST00000489979 RPS27AP62979 156 aaKnown RBP10.5□□□□□ -0.73
VARS-227ENST00000489979 MOB1BQ7L9L4 216 aa10.5□□□□□ -0.73
VARS-227ENST00000489979 PTX4Q96A99 478 aa10.5□□□□□ -0.73
VARS-227ENST00000489979 PHB2Q99623 299 aa10.5□□□□□ -0.73
VARS-227ENST00000489979 OVOL2Q9BRP0 275 aa10.5□□□□□ -0.73
VARS-227ENST00000489979 NICN1Q9BSH3 213 aa10.5□□□□□ -0.73
VARS-227ENST00000489979 HDHD3Q9BSH5 251 aaPredicted RBP10.5□□□□□ -0.73
VARS-227ENST00000489979 TMEM59Q9BXS4 323 aa10.5□□□□□ -0.73
VARS-227ENST00000489979 DIMT1Q9UNQ2 313 aaKnown RBP10.5□□□□□ -0.73
VARS-227ENST00000489979 IRGMA1A4Y4 181 aa10.49□□□□□ -0.73
VARS-227ENST00000489979 M0R1X1 148 aa10.49□□□□□ -0.73
VARS-227ENST00000489979 UBBP0CG47 229 aa10.49□□□□□ -0.73
VARS-227ENST00000489979 EDN2P20800 178 aa10.49□□□□□ -0.73
VARS-227ENST00000489979 HLA-DRB3P79483 266 aa10.49□□□□□ -0.73
VARS-227ENST00000489979 RPP25LQ8N5L8 163 aaKnown RBP10.49□□□□□ -0.73
VARS-227ENST00000489979 ZNF485Q8NCK3 441 aa10.49□□□□□ -0.73
VARS-227ENST00000489979 ADAD2Q8NCV1 583 aaKnown RBP10.49□□□□□ -0.73
VARS-227ENST00000489979 WDR89Q96FK6 387 aaPredicted RBP10.49□□□□□ -0.73
VARS-227ENST00000489979 C9orf16Q9BUW7 83 aa10.49□□□□□ -0.73
VARS-227ENST00000489979 KCNK15Q9H427 330 aa10.49□□□□□ -0.73
VARS-227ENST00000489979 PLEKHJ1Q9NW61 149 aa10.49□□□□□ -0.73
VARS-227ENST00000489979 ZNF230Q9UIE0 474 aaPredicted RBP10.49□□□□□ -0.73
VARS-227ENST00000489979 KIAA1109Q2LD37 5005 aa10.48□□□□□ -0.73
VARS-227ENST00000489979 A0A0A6YYD4 124 aa10.48□□□□□ -0.73
VARS-227ENST00000489979 TRBV6-6A0A0A6YYG2 114 aa10.48□□□□□ -0.73
VARS-227ENST00000489979 NUPR2A6NF83 97 aa10.48□□□□□ -0.73
VARS-227ENST00000489979 MSGN1A6NI15 193 aa10.48□□□□□ -0.73
VARS-227ENST00000489979 PRH1P02810 166 aa10.48□□□□□ -0.73
VARS-227ENST00000489979 SCTP09683 121 aa10.48□□□□□ -0.73
VARS-227ENST00000489979 OR9G9P0C7N8 305 aa10.48□□□□□ -0.73
VARS-227ENST00000489979 KIR2DS2P43631 304 aa10.48□□□□□ -0.73
VARS-227ENST00000489979 RHOGP84095 191 aa10.48□□□□□ -0.73
VARS-227ENST00000489979 UNC119Q13432 240 aa10.48□□□□□ -0.73
VARS-227ENST00000489979 EXOSC2Q13868 293 aaKnown RBP10.48□□□□□ -0.73
VARS-227ENST00000489979 TMEM80Q96HE8 168 aa10.48□□□□□ -0.73
VARS-227ENST00000489979 HARBI1Q96MB7 349 aa10.48□□□□□ -0.73
VARS-227ENST00000489979 TM2D1Q9BX74 207 aa10.48□□□□□ -0.73
VARS-227ENST00000489979 RIMS4Q9H426 269 aaPredicted RBP10.48□□□□□ -0.73
VARS-227ENST00000489979 AKIP1Q9NQ31 210 aa10.48□□□□□ -0.73
VARS-227ENST00000489979 ZC4H2Q9NQZ6 224 aa10.48□□□□□ -0.73
VARS-227ENST00000489979 AK3Q9UIJ7 227 aa10.48□□□□□ -0.73
VARS-227ENST00000489979 SELENOKQ9Y6D0 94 aa10.48□□□□□ -0.73
VARS-227ENST00000489979 C2orf70A6NJV1 201 aa10.47□□□□□ -0.73
VARS-227ENST00000489979 SRRM4A7MD48 611 aaKnown RBP10.47□□□□□ -0.73
VARS-227ENST00000489979 EBAG9O00559 213 aa10.47□□□□□ -0.73
VARS-227ENST00000489979 FOLR2P14207 255 aa10.47□□□□□ -0.73
VARS-227ENST00000489979 ZNF45Q02386 682 aa10.47□□□□□ -0.73
VARS-227ENST00000489979 ATP5G2Q06055 141 aa10.47□□□□□ -0.73
VARS-227ENST00000489979 MRGPRG-AS1Q2M3A8 158 aa10.47□□□□□ -0.73
VARS-227ENST00000489979 KCNG3Q8TAE7 436 aa10.47□□□□□ -0.73
VARS-227ENST00000489979 GGTLC1Q9BX51 225 aa10.47□□□□□ -0.73
VARS-227ENST00000489979 TECRQ9NZ01 308 aaKnown RBP10.47□□□□□ -0.73
VARS-227ENST00000489979 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.46□□□□□ -0.73
VARS-227ENST00000489979 IGKV1-6A0A0C4DH72 117 aa10.46□□□□□ -0.73
VARS-227ENST00000489979 A0A0J9YWU9 116 aa10.46□□□□□ -0.73
VARS-227ENST00000489979 FAM223BA6NKX1 122 aa10.46□□□□□ -0.73
VARS-227ENST00000489979 SHOXO15266 292 aa10.46□□□□□ -0.73
VARS-227ENST00000489979 MPPED1O15442 326 aa10.46□□□□□ -0.73
VARS-227ENST00000489979 CELP19835 753 aa10.46□□□□□ -0.73
VARS-227ENST00000489979 TAS2R43P59537 309 aa10.46□□□□□ -0.73
VARS-227ENST00000489979 EWSR1Q01844 656 aaKnown RBP eCLIP10.46□□□□□ -0.73
VARS-227ENST00000489979 MED21Q13503 144 aa10.46□□□□□ -0.73
VARS-227ENST00000489979 TNXAQ16473 311 aa10.46□□□□□ -0.73
VARS-227ENST00000489979 GLT8D1Q68CQ7 371 aa10.46□□□□□ -0.73
VARS-227ENST00000489979 ZFP1Q6P2D0 407 aa10.46□□□□□ -0.73
VARS-227ENST00000489979 CEMP1Q6PRD7 247 aaPredicted RBP10.46□□□□□ -0.73
VARS-227ENST00000489979 SLC16A13Q7RTY0 426 aa10.46□□□□□ -0.73
VARS-227ENST00000489979 FAM223AQ8IWN6 122 aa10.46□□□□□ -0.73
VARS-227ENST00000489979 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.46□□□□□ -0.73
VARS-227ENST00000489979 GGHQ92820 318 aa10.46□□□□□ -0.73
VARS-227ENST00000489979 KCTD12Q96CX2 325 aaKnown RBP10.46□□□□□ -0.73
VARS-227ENST00000489979 Q9N2K0 584 aa10.46□□□□□ -0.73
VARS-227ENST00000489979 RDH8Q9NYR8 311 aa10.46□□□□□ -0.73
VARS-227ENST00000489979 MGAT4AQ9UM21 535 aa10.46□□□□□ -0.73
VARS-227ENST00000489979 RYR1P21817 5038 aa10.46□□□□□ -0.74
VARS-227ENST00000489979 LOC102724200A0A096LPH7 203 aaPredicted RBP10.45□□□□□ -0.74
VARS-227ENST00000489979 TRBV9A0A0B4J1U6 114 aa10.45□□□□□ -0.74
VARS-227ENST00000489979 TMEM14DPA8MWL7 114 aa10.45□□□□□ -0.74
VARS-227ENST00000489979 PPP5D1E7EU14 171 aa10.45□□□□□ -0.74
VARS-227ENST00000489979 SOCS1O15524 211 aa10.45□□□□□ -0.74
VARS-227ENST00000489979 TUSC2O75896 110 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms