RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 C8orf4Q9NR00 106 aa0.86□□□□□ -2.27
CCDC39-206ENST00000489868 MS4A12Q9NXJ0 267 aa0.86□□□□□ -2.27
CCDC39-206ENST00000489868 NPATQ14207 1427 aa0.86□□□□□ -2.27
CCDC39-206ENST00000489868 MYH11P35749 1972 aa0.86□□□□□ -2.27
CCDC39-206ENST00000489868 CHD5Q8TDI0 1954 aa0.86□□□□□ -2.27
CCDC39-206ENST00000489868 NUP153P49790 1475 aaKnown RBP0.86□□□□□ -2.27
CCDC39-206ENST00000489868 DIDO1Q9BTC0 2240 aaKnown RBP0.85□□□□□ -2.27
CCDC39-206ENST00000489868 PLA2G10O15496 165 aa0.85□□□□□ -2.27
CCDC39-206ENST00000489868 GSTZ1O43708 216 aaPredicted RBP0.85□□□□□ -2.27
CCDC39-206ENST00000489868 UCHL1P09936 223 aa0.85□□□□□ -2.27
CCDC39-206ENST00000489868 CCR2P41597 374 aa0.85□□□□□ -2.27
CCDC39-206ENST00000489868 DAD1P61803 113 aa0.85□□□□□ -2.27
CCDC39-206ENST00000489868 TMED1Q13445 227 aa0.85□□□□□ -2.27
CCDC39-206ENST00000489868 SCGB1D4Q6XE38 83 aa0.85□□□□□ -2.27
CCDC39-206ENST00000489868 CCDC12Q8WUD4 166 aaPredicted RBP0.85□□□□□ -2.27
CCDC39-206ENST00000489868 OR7D2Q96RA2 312 aa0.85□□□□□ -2.27
CCDC39-206ENST00000489868 SIKE1Q9BRV8 207 aa0.85□□□□□ -2.27
CCDC39-206ENST00000489868 TTTY13Q9BZ97 58 aa0.85□□□□□ -2.27
CCDC39-206ENST00000489868 REREQ9P2R6 1566 aa0.84□□□□□ -2.27
CCDC39-206ENST00000489868 CIAO1O76071 339 aa0.84□□□□□ -2.27
CCDC39-206ENST00000489868 NDUFB2O95178 105 aa0.84□□□□□ -2.27
CCDC39-206ENST00000489868 HBZP02008 142 aa0.84□□□□□ -2.27
CCDC39-206ENST00000489868 DMTNQ08495 405 aa0.84□□□□□ -2.27
CCDC39-206ENST00000489868 SLC36A2Q495M3 483 aa0.84□□□□□ -2.27
CCDC39-206ENST00000489868 RBM48Q5RL73 367 aaKnown RBP0.84□□□□□ -2.27
CCDC39-206ENST00000489868 TMEM42Q69YG0 159 aa0.84□□□□□ -2.27
CCDC39-206ENST00000489868 LCN8Q6JVE9 175 aa0.84□□□□□ -2.27
CCDC39-206ENST00000489868 FP248Q71RG6 208 aaPredicted RBP0.84□□□□□ -2.27
CCDC39-206ENST00000489868 COPS6Q7L5N1 327 aa0.84□□□□□ -2.27
CCDC39-206ENST00000489868 IQCF2Q8IXL9 164 aa0.84□□□□□ -2.27
CCDC39-206ENST00000489868 NATD1Q8N6N6 113 aa0.84□□□□□ -2.27
CCDC39-206ENST00000489868 SFRP2Q96HF1 295 aa0.84□□□□□ -2.27
CCDC39-206ENST00000489868 CYTH2Q99418 400 aa0.84□□□□□ -2.27
CCDC39-206ENST00000489868 PAIP2Q9BPZ3 127 aaKnown RBP0.84□□□□□ -2.27
CCDC39-206ENST00000489868 AGPAT3Q9NRZ7 376 aa0.84□□□□□ -2.27
CCDC39-206ENST00000489868 PCDH15Q96QU1 1955 aa0.84□□□□□ -2.28
CCDC39-206ENST00000489868 MYOFQ9NZM1 2061 aa0.84□□□□□ -2.28
CCDC39-206ENST00000489868 IGKV3-7A0A075B6H7 116 aa0.83□□□□□ -2.28
CCDC39-206ENST00000489868 GOLGA8QA0A0J9YX86 632 aa0.83□□□□□ -2.28
CCDC39-206ENST00000489868 FAM25EA8MYX2 175 aa0.83□□□□□ -2.28
CCDC39-206ENST00000489868 PRB4P10163 310 aaPredicted RBP0.83□□□□□ -2.28
CCDC39-206ENST00000489868 SYT1P21579 422 aa0.83□□□□□ -2.28
CCDC39-206ENST00000489868 IFNGR2P38484 337 aa0.83□□□□□ -2.28
CCDC39-206ENST00000489868 CD151P48509 253 aa0.83□□□□□ -2.28
CCDC39-206ENST00000489868 C15orf53Q8NAA6 179 aa0.83□□□□□ -2.28
CCDC39-206ENST00000489868 MNS1Q8NEH6 495 aa0.83□□□□□ -2.28
CCDC39-206ENST00000489868 OR1L8Q8NGR8 309 aa0.83□□□□□ -2.28
CCDC39-206ENST00000489868 ASCL3Q9NQ33 180 aa0.83□□□□□ -2.28
CCDC39-206ENST00000489868 TAAR3PQ9P1P4 343 aa0.83□□□□□ -2.28
CCDC39-206ENST00000489868 POLR3HQ9Y535 204 aaPredicted RBP0.83□□□□□ -2.28
CCDC39-206ENST00000489868 LINC00854A0A1B0GVQ3 168 aa0.82□□□□□ -2.28
CCDC39-206ENST00000489868 M0R381 172 aa0.82□□□□□ -2.28
CCDC39-206ENST00000489868 LIN7AO14910 233 aaPredicted RBP0.82□□□□□ -2.28
CCDC39-206ENST00000489868 ADAP1O75689 374 aa0.82□□□□□ -2.28
CCDC39-206ENST00000489868 NPYP01303 97 aa0.82□□□□□ -2.28
CCDC39-206ENST00000489868 APOA1P02647 267 aa0.82□□□□□ -2.28
CCDC39-206ENST00000489868 HOXC5Q00444 222 aa0.82□□□□□ -2.28
CCDC39-206ENST00000489868 EXOC3L4Q17RC7 722 aa0.82□□□□□ -2.28
CCDC39-206ENST00000489868 FBXO48Q5FWF7 155 aa0.82□□□□□ -2.28
CCDC39-206ENST00000489868 SLC13A5Q86YT5 568 aaPredicted RBP0.82□□□□□ -2.28
CCDC39-206ENST00000489868 LRRC34Q8IZ02 419 aa0.82□□□□□ -2.28
CCDC39-206ENST00000489868 ZNF75CPQ92670 426 aaPredicted RBP0.82□□□□□ -2.28
CCDC39-206ENST00000489868 ITFG2Q969R8 447 aa0.82□□□□□ -2.28
CCDC39-206ENST00000489868 PPWD1Q96BP3 646 aaKnown RBP0.82□□□□□ -2.28
CCDC39-206ENST00000489868 TMEM208Q9BTX3 173 aa0.82□□□□□ -2.28
CCDC39-206ENST00000489868 EIF5A2Q9GZV4 153 aaKnown RBP0.82□□□□□ -2.28
CCDC39-206ENST00000489868 ZNHIT6Q9NWK9 470 aaKnown RBP0.82□□□□□ -2.28
CCDC39-206ENST00000489868 CFAP45Q9UL16 551 aa0.82□□□□□ -2.28
CCDC39-206ENST00000489868 KLK5Q9Y337 293 aaPredicted RBP0.82□□□□□ -2.28
CCDC39-206ENST00000489868 TMEM94Q12767 1356 aa0.82□□□□□ -2.28
CCDC39-206ENST00000489868 PIK3R4Q99570 1358 aa0.82□□□□□ -2.28
CCDC39-206ENST00000489868 GRIN2BQ13224 1484 aa0.81□□□□□ -2.28
CCDC39-206ENST00000489868 LOC100506127A0A0U1RQW1 187 aa0.81□□□□□ -2.28
CCDC39-206ENST00000489868 TXNDC9O14530 226 aa0.81□□□□□ -2.28
CCDC39-206ENST00000489868 MRPS14O60783 128 aaKnown RBP0.81□□□□□ -2.28
CCDC39-206ENST00000489868 CRPP02741 224 aa0.81□□□□□ -2.28
CCDC39-206ENST00000489868 NEFHP12036 1026 aa0.81□□□□□ -2.28
CCDC39-206ENST00000489868 AKR1C3P42330 323 aa0.81□□□□□ -2.28
CCDC39-206ENST00000489868 GABRA2P47869 451 aa0.81□□□□□ -2.28
CCDC39-206ENST00000489868 AQP4P55087 323 aa0.81□□□□□ -2.28
CCDC39-206ENST00000489868 CTBP2P56545 445 aa0.81□□□□□ -2.28
CCDC39-206ENST00000489868 Q3ZCU0 254 aa0.81□□□□□ -2.28
CCDC39-206ENST00000489868 BLIDQ8IZY5 108 aa0.81□□□□□ -2.28
CCDC39-206ENST00000489868 SMIM12Q96EX1 92 aa0.81□□□□□ -2.28
CCDC39-206ENST00000489868 CPNE2Q96FN4 548 aaPredicted RBP0.81□□□□□ -2.28
CCDC39-206ENST00000489868 CCDC94Q9BW85 323 aaPredicted RBP0.81□□□□□ -2.28
CCDC39-206ENST00000489868 NRBP2Q9NSY0 501 aa0.81□□□□□ -2.28
CCDC39-206ENST00000489868 INTS1Q8N201 2190 aaKnown RBP0.81□□□□□ -2.28
CCDC39-206ENST00000489868 CPAMD8Q8IZJ3 1885 aa0.8□□□□□ -2.28
CCDC39-206ENST00000489868 M0QX08 132 aa0.8□□□□□ -2.28
CCDC39-206ENST00000489868 NEMFO60524 1076 aa0.8□□□□□ -2.28
CCDC39-206ENST00000489868 E2F6O75461 281 aa0.8□□□□□ -2.28
CCDC39-206ENST00000489868 ATP5G1P05496 136 aa0.8□□□□□ -2.28
CCDC39-206ENST00000489868 TPM3P06753 285 aa0.8□□□□□ -2.28
CCDC39-206ENST00000489868 DEFA4P12838 97 aa0.8□□□□□ -2.28
CCDC39-206ENST00000489868 CRATP43155 626 aa0.8□□□□□ -2.28
CCDC39-206ENST00000489868 PLCXD2Q0VAA5 305 aa0.8□□□□□ -2.28
CCDC39-206ENST00000489868 SYCP1Q15431 976 aa0.8□□□□□ -2.28
CCDC39-206ENST00000489868 KTN1-AS1Q86SY8 53 aa0.8□□□□□ -2.28
CCDC39-206ENST00000489868 BAP18Q8IXM2 172 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms