RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 NDUFA3O95167 84 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 TFAP2AP05549 437 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 LGALS1P09382 135 aaKnown RBP5.5□□□□□ -1.53
COL9A1-209ENST00000489861 UCHL1P09936 223 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 HSMCR30P0CW71 290 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 SLC2A2P11168 524 aaPredicted RBP5.5□□□□□ -1.53
COL9A1-209ENST00000489861 CPEP16870 476 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 GALP22466 123 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 ZBTB25P24278 435 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 GADD45AP24522 165 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 MYL9P24844 172 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 BLVRBP30043 206 aaPredicted RBP5.5□□□□□ -1.53
COL9A1-209ENST00000489861 PPIFP30405 207 aaKnown RBP5.5□□□□□ -1.53
COL9A1-209ENST00000489861 CHRNA7P36544 502 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 MAP2K4P45985 399 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 SERPINB10P48595 397 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 RAB9AP51151 201 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 CRIP2P52943 208 aaPredicted RBP5.5□□□□□ -1.53
COL9A1-209ENST00000489861 TPBGQ13641 420 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 DIAPH2-AS1Q14236 149 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 P2RY14Q15391 338 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 RAB11BQ15907 218 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 CT45A1Q5HYN5 189 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 UTF1Q5T230 341 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 ZNF833PQ6ZTB9 187 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 ZNF367Q7RTV3 350 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 SVOPQ8N4V2 548 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 ZNF645Q8N7E2 425 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 NPBQ8NG41 125 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 OR56B1Q8NGI3 324 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 CT45A3Q8NHU0 189 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 SETD6Q8TBK2 473 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 PHLDA1Q8WV24 401 aaPredicted RBP5.5□□□□□ -1.53
COL9A1-209ENST00000489861 FAM46BQ96A09 425 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 ORAI1Q96D31 301 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 TPSG1Q9NRR2 321 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 ZNF221Q9UK13 617 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 HSF4Q9ULV5 492 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 STUB1Q9UNE7 303 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 WASHC3Q9Y3C0 194 aa5.5□□□□□ -1.53
COL9A1-209ENST00000489861 IGHV4OR15-8A0A075B7B6 117 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 A0A087WW49 117 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 TRBV6-6A0A0A6YYG2 114 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 TRAV39A0A0B4J263 110 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 A0A1W2PP11 408 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 SHISA3A0PJX4 238 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 METTL21EPA6NDL7 271 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 TMEM14DPA8MWL7 114 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 H0Y980 276 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 RRHO14718 337 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 SCGNO76038 276 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 CNIH1O95406 144 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 DIRAS3O95661 229 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 IGLV1-40P01703 118 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 HSPB1P04792 205 aaKnown RBP5.49□□□□□ -1.53
COL9A1-209ENST00000489861 RCC1P18754 421 aaPredicted RBP5.49□□□□□ -1.53
COL9A1-209ENST00000489861 AADACP22760 399 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 HMGN3Q15651 99 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 TBCEQ15813 527 aaPredicted RBP5.49□□□□□ -1.53
COL9A1-209ENST00000489861 SSX1Q16384 188 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 ECSCRQ19T08 205 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 LINC01559Q495D7 138 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 AKIRIN2Q53H80 203 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 LIPKQ5VXJ0 399 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 CD200R1LQ6Q8B3 271 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 LRRTM1Q86UE6 522 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 GTSCR1Q86UQ5 136 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 ANKRD13BQ86YJ7 626 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 PDPNQ86YL7 162 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.49□□□□□ -1.53
COL9A1-209ENST00000489861 OR1L1Q8NH94 360 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 MRPL30Q8TCC3 161 aaKnown RBP5.49□□□□□ -1.53
COL9A1-209ENST00000489861 IL1F10Q8WWZ1 152 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 FCGR1BQ92637 280 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 HSPB9Q9BQS6 159 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 RSRP1Q9BUV0 290 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 WFDC10AQ9H1F0 79 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 DUSP21Q9H596 190 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 RANGRFQ9HD47 186 aaPredicted RBP5.49□□□□□ -1.53
COL9A1-209ENST00000489861 C12orf4Q9NQ89 552 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 PLSCR3Q9NRY6 295 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 SLC23A1Q9UHI7 598 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 RAB22AQ9UL26 194 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 RAB26Q9ULW5 256 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 LSM2Q9Y333 95 aaKnown RBP5.49□□□□□ -1.53
COL9A1-209ENST00000489861 V9GY05 133 aa5.49□□□□□ -1.53
COL9A1-209ENST00000489861 VPS13BQ7Z7G8 4022 aa5.48□□□□□ -1.53
COL9A1-209ENST00000489861 SAA2-SAA4A0A096LPE2 208 aa5.48□□□□□ -1.53
COL9A1-209ENST00000489861 IGHV7-81A0A0B4J1V7 117 aa5.48□□□□□ -1.53
COL9A1-209ENST00000489861 C13orf42A0A1B0GVH6 325 aa5.48□□□□□ -1.53
COL9A1-209ENST00000489861 IZUMO1RA6ND01 250 aa5.48□□□□□ -1.53
COL9A1-209ENST00000489861 CD3GP09693 182 aa5.48□□□□□ -1.53
COL9A1-209ENST00000489861 SAA2P0DJI9 122 aaPredicted RBP5.48□□□□□ -1.53
COL9A1-209ENST00000489861 RRASP10301 218 aa5.48□□□□□ -1.53
COL9A1-209ENST00000489861 CD37P11049 281 aa5.48□□□□□ -1.53
COL9A1-209ENST00000489861 CRHBPP24387 322 aa5.48□□□□□ -1.53
COL9A1-209ENST00000489861 CALRP27797 417 aaKnown RBP5.48□□□□□ -1.53
COL9A1-209ENST00000489861 F2RL1P55085 397 aa5.48□□□□□ -1.53
COL9A1-209ENST00000489861 AQP4P55087 323 aa5.48□□□□□ -1.53
COL9A1-209ENST00000489861 TPPP2P59282 170 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms