RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 TAF15Q92804 592 aaKnown RBP eCLIP4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 NEUROG1Q92886 237 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 ZNF479Q96JC4 524 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 POM121L2Q96KW2 1035 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 VSTM2LQ96N03 204 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 TXNDC17Q9BRA2 123 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 LRRC61Q9BV99 259 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 NPVFQ9HCQ7 196 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 PILRBQ9UKJ0 227 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 PLA2G2DQ9UNK4 145 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 RAXQ9Y2V3 346 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 SCN3AQ9NY46 2000 aa4.04□□□□□ -1.76
SNRNP40-206ENST00000489853 TMEM265A0A087WTH1 108 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 IGKV1-9A0A0C4DH69 117 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 TMEM189A5PLL7 270 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 FAM231BA6NCW3 169 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 KIAA1324LA8MWY0 1029 aaPredicted RBP4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 SNURFLB1AK76 121 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 RAB29O14966 203 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 HLA-DRB1P01911 266 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 CTSSP25774 331 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 TIMP3P35625 211 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 IER3P46695 156 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 RRADP55042 308 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 MLF1P58340 268 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 PLP1P60201 277 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 GNB1P62873 340 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 SEC11AP67812 179 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 HTD2P86397 168 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 HSD52Q0P140 79 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 OR8B8Q15620 311 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 CD300EQ496F6 205 aaPredicted RBP4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 FNDC7Q5VTL7 733 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 ZNF776Q68DI1 518 aaPredicted RBP4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 ZNF324BQ6AW86 544 aaPredicted RBP4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 FAM180AQ6UWF9 173 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 DOK3Q7L591 496 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 TBC1D26Q86UD7 250 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 LINC00346Q8IVM7 164 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 ATOH7Q8N100 152 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 BCORP1Q8N888 145 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 OR10G3Q8NGC4 313 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 OR8B3Q8NGG8 313 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 OR5A1Q8NGJ0 315 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 ZNF501Q96CX3 271 aaPredicted RBP4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 OR4C12Q96R67 309 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 OR8B2Q96RD0 313 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 TAAR6Q96RI8 345 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 HDHD3Q9BSH5 251 aaPredicted RBP4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 QTRT1Q9BXR0 403 aaKnown RBP4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 COMMD5Q9GZQ3 224 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 HES4Q9HCC6 221 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 KCNIP2Q9NS61 270 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 C1RLQ9NZP8 487 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 PPP1R3CQ9UQK1 317 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 MPDZO75970 2070 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 FREM3P0C091 2139 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 DNAH12Q6ZR08 3092 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 ATG2AQ2TAZ0 1938 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 A0A0G2JMM0 328 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 A0A1W2PPB8 328 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 C7orf71A4D174 169 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 C9orf118A6NHY6 69 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 SLC22A20A6NK97 555 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 KIR3DP1A8MWS1 328 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 H3BRM9 83 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 K7EP34 96 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 PLPP3O14495 311 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 TNFSF12O43508 249 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 NDUFB4O95168 129 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 NAPSAO96009 420 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 PPYP01298 95 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 IGKV1D-33P01593 117 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 IGKV1-33P01594 117 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 ZNF17P17021 662 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 CRYBB3P26998 211 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 GPM6AP51674 278 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 FUT6P51993 359 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 HIST1H1AQ02539 215 aaPredicted RBP4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 DLX2Q07687 328 aaPredicted RBP4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 SMAGPQ0VAQ4 97 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 RAB30Q15771 203 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 RPEL1Q2QD12 228 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 PRTGQ2VWP7 1150 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 POM121L1PQ3SYA9 428 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 TMEM52BQ4KMG9 183 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 KIAA0895LQ68EN5 471 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 LCN12Q6JVE5 192 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 CRIP3Q6Q6R5 217 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 FIGLAQ6QHK4 219 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 DGAT2L6Q6ZPD8 337 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 MRPL21Q7Z2W9 205 aaKnown RBP4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 OR8I2Q8N0Y5 310 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 RNF152Q8N8N0 203 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 OR5D13Q8NGL4 314 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 OR10G9Q8NGN4 311 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 OR10G7Q8NGN6 311 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 GATAD1Q8WUU5 269 aa4.03□□□□□ -1.76
SNRNP40-206ENST00000489853 SPACA9Q96E40 222 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms