RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 ZNF556Q9HAH1 456 aa8.29□□□□□ -1.08
HDAC6-233ENST00000489352 SPACA1Q9HBV2 294 aa8.29□□□□□ -1.08
HDAC6-233ENST00000489352 ADGRL4Q9HBW9 690 aa8.29□□□□□ -1.08
HDAC6-233ENST00000489352 GNG8Q9UK08 70 aa8.29□□□□□ -1.08
HDAC6-233ENST00000489352 DMRT1Q9Y5R6 373 aa8.29□□□□□ -1.08
HDAC6-233ENST00000489352 ELOA3CA0A087WX78 387 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-233ENST00000489352 NBDYA0A0U1RRE5 68 aa8.28□□□□□ -1.08
HDAC6-233ENST00000489352 C15orf61A6NNL5 157 aa8.28□□□□□ -1.08
HDAC6-233ENST00000489352 F8W735 103 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-233ENST00000489352 CDRT1O95170 752 aa8.28□□□□□ -1.08
HDAC6-233ENST00000489352 ISG15P05161 165 aa8.28□□□□□ -1.08
HDAC6-233ENST00000489352 GALP22466 123 aa8.28□□□□□ -1.08
HDAC6-233ENST00000489352 PSME3P61289 254 aa8.28□□□□□ -1.08
HDAC6-233ENST00000489352 SSBP2P81877 361 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-233ENST00000489352 LY6G6FQ5SQ64 297 aa8.28□□□□□ -1.08
HDAC6-233ENST00000489352 TMEM236Q5W0B7 351 aa8.28□□□□□ -1.08
HDAC6-233ENST00000489352 SSX6Q7RTT6 188 aa8.28□□□□□ -1.08
HDAC6-233ENST00000489352 SLC25A42Q86VD7 318 aa8.28□□□□□ -1.08
HDAC6-233ENST00000489352 PDPNQ86YL7 162 aa8.28□□□□□ -1.08
HDAC6-233ENST00000489352 DRAXINQ8NBI3 349 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-233ENST00000489352 TMEM163Q8TC26 289 aa8.28□□□□□ -1.08
HDAC6-233ENST00000489352 GIPC3Q8TF64 312 aa8.28□□□□□ -1.08
HDAC6-233ENST00000489352 IL1F10Q8WWZ1 152 aa8.28□□□□□ -1.08
HDAC6-233ENST00000489352 PAK1IP1Q9NWT1 392 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-233ENST00000489352 ABRACLQ9P1F3 81 aa8.28□□□□□ -1.08
HDAC6-233ENST00000489352 ABCD2Q9UBJ2 740 aa8.28□□□□□ -1.08
HDAC6-233ENST00000489352 LRRC42Q9Y546 428 aa8.28□□□□□ -1.08
HDAC6-233ENST00000489352 A0A1W2PQL4 384 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-233ENST00000489352 FAM90A7PA6NKC0 464 aa8.27□□□□□ -1.09
HDAC6-233ENST00000489352 GABRPO00591 440 aa8.27□□□□□ -1.09
HDAC6-233ENST00000489352 ACTL6BO94805 426 aa8.27□□□□□ -1.09
HDAC6-233ENST00000489352 COX4I1P13073 169 aa8.27□□□□□ -1.09
HDAC6-233ENST00000489352 OSMP13725 252 aa8.27□□□□□ -1.09
HDAC6-233ENST00000489352 SERPINA2P20848 420 aa8.27□□□□□ -1.09
HDAC6-233ENST00000489352 ELLP55199 621 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-233ENST00000489352 XGP55808 180 aa8.27□□□□□ -1.09
HDAC6-233ENST00000489352 CBX3Q13185 183 aa8.27□□□□□ -1.09
HDAC6-233ENST00000489352 NHLRC3Q5JS37 347 aa8.27□□□□□ -1.09
HDAC6-233ENST00000489352 C8orf82Q6P1X6 216 aaPredicted RBP8.27□□□□□ -1.09
HDAC6-233ENST00000489352 ZNF554Q86TJ5 538 aa8.27□□□□□ -1.09
HDAC6-233ENST00000489352 ACOT12Q8WYK0 555 aa8.27□□□□□ -1.09
HDAC6-233ENST00000489352 EEF1AKMT3Q96AZ1 226 aa8.27□□□□□ -1.09
HDAC6-233ENST00000489352 ABHD14BQ96IU4 210 aa8.27□□□□□ -1.09
HDAC6-233ENST00000489352 JAM3Q9BX67 310 aa8.27□□□□□ -1.09
HDAC6-233ENST00000489352 A0A1B0GW64 132 aa8.26□□□□□ -1.09
HDAC6-233ENST00000489352 KRTAP29-1A8MX34 341 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-233ENST00000489352 CA11O75493 328 aa8.26□□□□□ -1.09
HDAC6-233ENST00000489352 OR2T7P0C7T2 308 aa8.26□□□□□ -1.09
HDAC6-233ENST00000489352 ATP6V1E1P36543 226 aa8.26□□□□□ -1.09
HDAC6-233ENST00000489352 OR2T5Q6IEZ7 315 aa8.26□□□□□ -1.09
HDAC6-233ENST00000489352 UNQ9165/PRO28630Q6UXU0 137 aa8.26□□□□□ -1.09
HDAC6-233ENST00000489352 HACD2Q6Y1H2 254 aa8.26□□□□□ -1.09
HDAC6-233ENST00000489352 OR51A4Q8NGJ6 313 aa8.26□□□□□ -1.09
HDAC6-233ENST00000489352 OR2G2Q8NGZ5 317 aa8.26□□□□□ -1.09
HDAC6-233ENST00000489352 OR2T29Q8NH02 315 aa8.26□□□□□ -1.09
HDAC6-233ENST00000489352 SRSF12Q8WXF0 261 aaKnown RBP8.26□□□□□ -1.09
HDAC6-233ENST00000489352 SPIN2AQ99865 258 aa8.26□□□□□ -1.09
HDAC6-233ENST00000489352 SPIN2BQ9BPZ2 258 aa8.26□□□□□ -1.09
HDAC6-233ENST00000489352 YTHDF1Q9BYJ9 559 aaKnown RBP8.26□□□□□ -1.09
HDAC6-233ENST00000489352 CELA1Q9UNI1 258 aa8.26□□□□□ -1.09
HDAC6-233ENST00000489352 S4R3C0 116 aa8.26□□□□□ -1.09
HDAC6-233ENST00000489352 DPPA5A6NC42 116 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 B2RBV5 119 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 EDF1O60869 148 aaKnown RBP8.25□□□□□ -1.09
HDAC6-233ENST00000489352 GPX5O75715 221 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 CTSDP07339 412 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-233ENST00000489352 GTF2F2P13984 249 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 RAB3AP20336 220 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 TFPI2P48307 235 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 CRISP1P54107 249 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 TMEM41BQ5BJD5 291 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 RAB12Q6IQ22 244 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 ZNF529Q6P280 563 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 C5orf24Q7Z6I8 188 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 TTC9CQ8N5M4 171 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 C15orf53Q8NAA6 179 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 OR10H4Q8NGA5 316 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 NSL1Q96IY1 281 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 HARBI1Q96MB7 349 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 PRRG3Q9BZD7 231 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 TMBIM4Q9HC24 238 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 SLC35D1Q9NTN3 355 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 FRRS1LQ9P0K9 344 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 PEX16Q9Y5Y5 336 aa8.25□□□□□ -1.09
HDAC6-233ENST00000489352 IGHV3-35A0A0C4DH35 117 aa8.24□□□□□ -1.09
HDAC6-233ENST00000489352 UBE2QL1A1L167 161 aa8.24□□□□□ -1.09
HDAC6-233ENST00000489352 ZNF780AO75290 641 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-233ENST00000489352 CLEC3BP05452 202 aa8.24□□□□□ -1.09
HDAC6-233ENST00000489352 CAPGP40121 348 aa8.24□□□□□ -1.09
HDAC6-233ENST00000489352 FAM98BQ52LJ0 330 aaKnown RBP8.24□□□□□ -1.09
HDAC6-233ENST00000489352 TP53I3Q53FA7 332 aa8.24□□□□□ -1.09
HDAC6-233ENST00000489352 BCDIN3DQ7Z5W3 292 aaKnown RBP8.24□□□□□ -1.09
HDAC6-233ENST00000489352 STHQ8IWL8 128 aa8.24□□□□□ -1.09
HDAC6-233ENST00000489352 IL36GQ9NZH8 169 aa8.24□□□□□ -1.09
HDAC6-233ENST00000489352 ZNF221Q9UK13 617 aa8.24□□□□□ -1.09
HDAC6-233ENST00000489352 DHFRP00374 187 aa8.23□□□□□ -1.09
HDAC6-233ENST00000489352 IFNA5P01569 189 aa8.23□□□□□ -1.09
HDAC6-233ENST00000489352 HTR1AP08908 422 aa8.23□□□□□ -1.09
HDAC6-233ENST00000489352 VMA21Q3ZAQ7 101 aa8.23□□□□□ -1.09
HDAC6-233ENST00000489352 SLC22A6Q4U2R8 563 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms