RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 ARF6P62330 175 aa9.34□□□□□ -0.91
C9orf3-220ENST00000489318 TAGLNQ01995 201 aaKnown RBP9.34□□□□□ -0.91
C9orf3-220ENST00000489318 NOXA1Q86UR1 476 aa9.34□□□□□ -0.91
C9orf3-220ENST00000489318 ZNF383Q8NA42 475 aa9.34□□□□□ -0.91
C9orf3-220ENST00000489318 OR10X1Q8NGY0 326 aa9.34□□□□□ -0.91
C9orf3-220ENST00000489318 HYLS1Q96M11 299 aa9.34□□□□□ -0.91
C9orf3-220ENST00000489318 PCGF1Q9BSM1 259 aa9.34□□□□□ -0.91
C9orf3-220ENST00000489318 PDCD10Q9BUL8 212 aa9.34□□□□□ -0.91
C9orf3-220ENST00000489318 CHIAQ9BZP6 476 aa9.34□□□□□ -0.91
C9orf3-220ENST00000489318 RANBP3Q9H6Z4 567 aaPredicted RBP9.34□□□□□ -0.91
C9orf3-220ENST00000489318 PLEKHA2Q9HB19 425 aa9.34□□□□□ -0.91
C9orf3-220ENST00000489318 MMP26Q9NRE1 261 aa9.34□□□□□ -0.91
C9orf3-220ENST00000489318 COMMD9Q9P000 198 aa9.34□□□□□ -0.91
C9orf3-220ENST00000489318 PRELID3BQ9Y3B1 194 aa9.34□□□□□ -0.91
C9orf3-220ENST00000489318 AMMECR1Q9Y4X0 333 aaPredicted RBP9.34□□□□□ -0.91
C9orf3-220ENST00000489318 INSIG2Q9Y5U4 225 aa9.34□□□□□ -0.91
C9orf3-220ENST00000489318 ARHGAP32A7KAX9 2087 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 CR1P17927 2039 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 TRAV14DV4A0A0A6YYC5 116 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 C5orf51A6NDU8 294 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 LY6LH3BQJ8 138 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 SMLR1H3BR10 107 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 BUB1B-PAK6H3BSN5 160 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 TOR1AO14656 332 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 TXNL1O43396 289 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 S1PR2O95136 353 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 HPRT1P00492 218 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 IGKV1-5P01602 117 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 CT45A6P0DMU7 189 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 CT45A5P0DMU8 189 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 CT45A7P0DMV0 189 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 ZNF16P17020 682 aaPredicted RBP9.33□□□□□ -0.92
C9orf3-220ENST00000489318 HOXB4P17483 251 aaPredicted RBP9.33□□□□□ -0.92
C9orf3-220ENST00000489318 LPAR6P43657 344 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 DVL1P1P54792 670 aaPredicted RBP9.33□□□□□ -0.92
C9orf3-220ENST00000489318 PRRX1P54821 245 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 LOXL1Q08397 574 aaPredicted RBP9.33□□□□□ -0.92
C9orf3-220ENST00000489318 FGL1Q08830 312 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 ZNF816Q0VGE8 651 aaPredicted RBP9.33□□□□□ -0.92
C9orf3-220ENST00000489318 IAH1Q2TAA2 248 aaPredicted RBP9.33□□□□□ -0.92
C9orf3-220ENST00000489318 Q5BKY6 102 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 Q5PR19 223 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 DHRS7BQ6IAN0 325 aaPredicted RBP9.33□□□□□ -0.92
C9orf3-220ENST00000489318 VMO1Q7Z5L0 202 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 FAM219AQ8IW50 185 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 ZBTB8BQ8NAP8 495 aaPredicted RBP9.33□□□□□ -0.92
C9orf3-220ENST00000489318 OR5AN1Q8NGI8 311 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 OR4S2Q8NH73 311 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 SEC22AQ96IW7 307 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 SPIN2AQ99865 258 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 SPIN2BQ9BPZ2 258 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 HEXA-AS1Q9H8Q6 139 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 SIRT7Q9NRC8 400 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 COA4Q9NYJ1 87 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 TACC2O95359 2948 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 CELSR2Q9HCU4 2923 aa9.33□□□□□ -0.92
C9orf3-220ENST00000489318 APCP25054 2843 aa9.32□□□□□ -0.92
C9orf3-220ENST00000489318 SPG11Q96JI7 2443 aa9.32□□□□□ -0.92
C9orf3-220ENST00000489318 A0A0G2JRQ6 117 aa9.32□□□□□ -0.92
C9orf3-220ENST00000489318 FAM25EA8MYX2 175 aa9.32□□□□□ -0.92
C9orf3-220ENST00000489318 RNASEK-C17orf49H0YIS7 233 aa9.32□□□□□ -0.92
C9orf3-220ENST00000489318 PITX3O75364 302 aa9.32□□□□□ -0.92
C9orf3-220ENST00000489318 ATG12O94817 140 aa9.32□□□□□ -0.92
C9orf3-220ENST00000489318 LYL1P12980 280 aa9.32□□□□□ -0.92
C9orf3-220ENST00000489318 EIF2B2P49770 351 aaKnown RBP9.32□□□□□ -0.92
C9orf3-220ENST00000489318 ARHGDIBP52566 201 aa9.32□□□□□ -0.92
C9orf3-220ENST00000489318 DLX1P56177 255 aa9.32□□□□□ -0.92
C9orf3-220ENST00000489318 LINC00205P59089 165 aa9.32□□□□□ -0.92
C9orf3-220ENST00000489318 PAX8Q06710 450 aa9.32□□□□□ -0.92
C9orf3-220ENST00000489318 POU2AF1Q16633 256 aa9.32□□□□□ -0.92
C9orf3-220ENST00000489318 PNKDQ8N490 385 aa9.32□□□□□ -0.92
C9orf3-220ENST00000489318 DRAXINQ8NBI3 349 aaPredicted RBP9.32□□□□□ -0.92
C9orf3-220ENST00000489318 OR11H4Q8NGC9 324 aa9.32□□□□□ -0.92
C9orf3-220ENST00000489318 OR4D5Q8NGN0 318 aa9.32□□□□□ -0.92
C9orf3-220ENST00000489318 PPP1R1CQ8WVI7 109 aa9.32□□□□□ -0.92
C9orf3-220ENST00000489318 TBX15Q96SF7 602 aa9.32□□□□□ -0.92
C9orf3-220ENST00000489318 NABP2Q9BQ15 211 aa9.32□□□□□ -0.92
C9orf3-220ENST00000489318 MRPL20Q9BYC9 149 aaKnown RBP9.32□□□□□ -0.92
C9orf3-220ENST00000489318 MMP24Q9Y5R2 645 aa9.32□□□□□ -0.92
C9orf3-220ENST00000489318 CENPEQ02224 2701 aa9.31□□□□□ -0.92
C9orf3-220ENST00000489318 A0A1B0GU03 582 aa9.31□□□□□ -0.92
C9orf3-220ENST00000489318 C13orf42A0A1B0GVH6 325 aa9.31□□□□□ -0.92
C9orf3-220ENST00000489318 MARCH11A6NNE9 402 aa9.31□□□□□ -0.92
C9orf3-220ENST00000489318 FAM90A9PA6NNJ1 464 aa9.31□□□□□ -0.92
C9orf3-220ENST00000489318 HMSDA8MTL9 139 aa9.31□□□□□ -0.92
C9orf3-220ENST00000489318 B4DSR2 109 aa9.31□□□□□ -0.92
C9orf3-220ENST00000489318 H0YJW9 148 aa9.31□□□□□ -0.92
C9orf3-220ENST00000489318 FCGR3BO75015 233 aa9.31□□□□□ -0.92
C9orf3-220ENST00000489318 TOX4O94842 621 aa9.31□□□□□ -0.92
C9orf3-220ENST00000489318 MPC2O95563 127 aa9.31□□□□□ -0.92
C9orf3-220ENST00000489318 MSMBP08118 114 aa9.31□□□□□ -0.92
C9orf3-220ENST00000489318 RRASP10301 218 aa9.31□□□□□ -0.92
C9orf3-220ENST00000489318 SLC25A4P12235 298 aa9.31□□□□□ -0.92
C9orf3-220ENST00000489318 COX7A1P24310 79 aa9.31□□□□□ -0.92
C9orf3-220ENST00000489318 AKR1C2P52895 323 aa9.31□□□□□ -0.92
C9orf3-220ENST00000489318 DIAPH2-AS1Q14236 149 aa9.31□□□□□ -0.92
C9orf3-220ENST00000489318 HABP2Q14520 560 aaPredicted RBP9.31□□□□□ -0.92
C9orf3-220ENST00000489318 AARDQ4LEZ3 155 aa9.31□□□□□ -0.92
C9orf3-220ENST00000489318 OR2B11Q5JQS5 317 aa9.31□□□□□ -0.92
C9orf3-220ENST00000489318 PDPNQ86YL7 162 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms